Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0075600 Salix brachista HOM05D007199 ORTHO05D007257 4.0e-105 384.8 198 100.0
Potri.014G102600 Populus trichocarpa HOM05D007199 ORTHO05D007257 4.3e-67 258.5 266 57.9
Potri.002G175300 Populus trichocarpa HOM05D007199 ORTHO05D007257 9.4e-46 187.6 250 46.8
Manes.05G019000 Manihot esculenta HOM05D007199 ORTHO05D007257 2.0e-43 179.9 287 43.9
Manes.01G254801 Manihot esculenta HOM05D007199 ORTHO05D007257 6.7e-36 154.8 299 39.8
Thecc.01G336800 Theobroma cacao HOM05D007199 ORTHO05D007257 7.0e-33 144.8 294 36.4
Duzib138G1694 Durio zibethinus HOM05D007199 ORTHO05D007257 1.6e-29 133.7 300 35.0
Gohir.D11G103900 Gossypium hirsutum HOM05D007199 ORTHO05D007257 3.6e-29 132.5 286 34.6
Haze_15700 Corylus avellana HOM05D007199 ORTHO05D007257 1.4e-28 130.6 293 35.2
Gorai.007G111200 Gossypium raimondii HOM05D007199 ORTHO05D007257 3.0e-28 129.4 286 33.9
Gohir.A11G099400 Gossypium hirsutum HOM05D007199 ORTHO05D007257 4.0e-28 129.0 286 34.6
GSVIVG01027402001 Vitis vinifera HOM05D007199 ORTHO05D007257 4.4e-27 125.6 286 35.0
Ciclev10024292m.g Citrus clementina HOM05D007199 ORTHO05D007257 9.7e-27 124.4 284 35.2
Duzib133G0933 Durio zibethinus HOM05D007199 ORTHO05D007257 6.3e-26 121.7 315 33.3
Atru.chr5.734 Acer truncatum HOM05D007199 ORTHO05D007257 8.2e-26 121.3 288 35.1
CiPaw.02G043300 Carya illinoinensis HOM05D007199 ORTHO05D007257 3.1e-25 119.4 278 33.5
QL08p046296 Quercus lobata HOM05D007199 ORTHO05D007257 4.1e-25 119.0 289 33.9
Phvul.010G116850 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 7.0e-25 118.2 248 33.9
Phvul.010G116900 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 7.0e-25 118.2 248 33.9
Gorai.004G150000 Gossypium raimondii HOM05D007199 ORTHO05D007257 2.9e-23 112.8 235 33.2
Gohir.D08G145100 Gossypium hirsutum HOM05D007199 ORTHO05D007257 3.8e-23 112.5 235 33.2
Gohir.A08G124000 Gossypium hirsutum HOM05D007199 ORTHO05D007257 8.5e-23 111.3 234 33.3
Dinv32625 Davidia involucrata HOM05D007199 ORTHO05D007257 3.2e-22 109.4 280 34.3
VMungo0331G0932 Vigna mungo HOM05D007199 ORTHO05D007257 4.2e-22 109.0 256 31.2
Cpa.g.sc144.10 Carica papaya HOM05D007199 ORTHO05D007257 1.2e-21 107.5 274 32.5
Glyma.07G052500 Glycine max HOM05D007199 ORTHO05D007257 1.6e-21 107.1 261 31.8
TWI23G0381 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 1.6e-21 107.1 284 32.7
TWI14G0585 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 6.1e-21 105.1 271 32.1
Lj3g0002992 Lotus japonicus HOM05D007199 ORTHO05D007257 2.6e-19 99.8 296 29.4
Glyma.16G021400 Glycine max HOM05D007199 ORTHO05D007257 9.8e-19 97.8 265 30.6
Nn1g00376 Nelumbo nucifera HOM05D007199 ORTHO05D007257 8.3e-18 94.7 258 31.0
Dinv34240 Davidia involucrata HOM05D007199 ORTHO05D007257 1.4e-17 94.0 297 30.0
Medtr8g027100 Medicago truncatula HOM05D007199 ORTHO05D007257 5.4e-17 92.0 258 30.2
TAR629G0242 Trochodendron aralioides HOM05D007199 ORTHO05D007257 9.1e-17 91.3 285 30.2
THA.LOC104817388 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 1.2e-16 90.9 287 30.0
TPR.G15900 Trifolium pratense HOM05D007199 ORTHO05D007257 1.2e-16 90.9 84 59.5
CiPaw.01G079500 Carya illinoinensis HOM05D007199 ORTHO05D007257 3.5e-16 89.4 305 29.2
COL.COLO4_06259 Corchorus olitorius HOM05D007199 ORTHO05D007257 4.5e-16 89.0 114 50.0
Lalb_Chr15g0076391 Lupinus albus HOM05D007199 ORTHO05D007257 1.0e-15 87.8 88 48.9
Psat4g216200 Pisum sativum HOM05D007199 ORTHO05D007257 2.2e-15 86.7 266 28.9
Prupe.2G194000 Prunus persica HOM05D007199 ORTHO05D007257 5.0e-15 85.5 63 68.3
CsaV3_6G008960 Cucumis sativus L. HOM05D007199 ORTHO05D007257 8.5e-15 84.7 243 31.7
CSS0043385 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 1.9e-14 83.6 258 29.8
MELO3C022248.2 Cucumis melo HOM05D007199 ORTHO05D007257 2.5e-14 83.2 242 31.4
Hma1.2p1_0309F.1_g120450 Hydrangea macrophylla HOM05D007199 ORTHO05D007257 4.2e-14 82.4 306 29.1
Lj9C602T4 Lonicera japonica HOM05D007199 ORTHO05D007257 4.2e-14 82.4 61 65.6
Ca_23498_v3 Cicer arietinum L. HOM05D007199 ORTHO05D007257 1.2e-13 80.9 249 31.3
THA.LOC104802086 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 1.2e-13 80.9 280 28.6
TAR375G0146 Trochodendron aralioides HOM05D007199 ORTHO05D007257 1.2e-13 80.9 250 30.0
Sed0010537 Sechium edule HOM05D007199 ORTHO05D007257 1.0e-12 77.8 287 28.6
arahy.Tifrunner.gnm1.ann1.GEK5Z0 Arachis hypogaea HOM05D007199 ORTHO05D007257 1.8e-12 77.0 64 57.8
Gohir.A12G114200 Gossypium hirsutum HOM05D007199 ORTHO05D007257 2.3e-12 76.6 249 32.5
arahy.Tifrunner.gnm1.ann1.A7IBVM Arachis hypogaea HOM05D007199 ORTHO05D007257 3.0e-12 76.3 310 26.5
Aa31LG1G28040 Aethionema arabicum HOM05D007199 ORTHO05D007257 6.8e-12 75.1 88 46.6
arahy.Tifrunner.gnm1.ann1.WJU08E Arachis hypogaea HOM05D007199 ORTHO05D007257 6.8e-12 75.1 64 56.2
RcHm_v2.0_Chr1g0360641 Rosa chinensis HOM05D007199 ORTHO05D007257 6.8e-12 75.1 63 61.9
FAN03G0194 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.5e-11 73.9 254 28.3
Lalb_Chr10g0100741 Lupinus albus HOM05D007199 ORTHO05D007257 2.0e-11 73.6 287 25.1
MD07G1155200 Malus domestica HOM05D007199 ORTHO05D007257 2.0e-11 73.6 66 62.1
FvH4_7g17280 Fragaria vesca HOM05D007199 ORTHO05D007257 2.6e-11 73.2 247 28.3
arahy.Tifrunner.gnm1.ann1.P1IKWH Arachis hypogaea HOM05D007199 ORTHO05D007257 3.4e-11 72.8 321 25.5
FAN01G2057 Fragaria x ananassa HOM05D007199 ORTHO05D007257 3.4e-11 72.8 63 60.3
FAN10G2445 Fragaria x ananassa HOM05D007199 ORTHO05D007257 3.4e-11 72.8 63 60.3
FAN10G3440 Fragaria x ananassa HOM05D007199 ORTHO05D007257 3.4e-11 72.8 63 60.3
Eucgr.E00024 Eucalyptus grandis HOM05D007199 ORTHO05D007257 7.5e-11 71.6 262 29.8
FAN06G3172 Fragaria x ananassa HOM05D007199 ORTHO05D007257 7.5e-11 71.6 247 27.9
MD00G1035800 Malus domestica HOM05D007199 ORTHO05D007257 2.2e-10 70.1 314 29.9
Nitab4.5_0002638g0020 Nicotiana tabacum HOM05D007199 ORTHO05D007257 3.7e-10 69.3 271 27.7
Actinidia28100 Actinidia chinensis HOM05D007199 ORTHO05D007257 4.9e-10 68.9 252 27.0
AL4G46070 Arabidopsis lyrata HOM05D012720 ORTHO05D007257 4.9e-10 68.9 85 45.9
CARHR141980 Cardamine hirsuta HOM05D012720 ORTHO05D007257 4.9e-10 68.9 64 51.6
PSO782G1188 Papaver somniferum HOM05D007199 ORTHO05D007257 6.3e-10 68.6 272 27.9
BcaB01g03200 Brassica carinata HOM05D012720 ORTHO05D007257 1.8e-09 67.0 64 53.1
CSS0044672 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 3.1e-09 66.2 83 51.8
Thhalv10001576m.g Eutrema salsugineum HOM05D012720 ORTHO05D007257 3.1e-09 66.2 64 50.0
HanXRQChr04g0120361 Helianthus annuus HOM05D007199 ORTHO05D007257 3.1e-09 66.2 82 46.3
BcaC02g12658 Brassica carinata HOM05D012720 ORTHO05D007257 7.0e-09 65.1 78 46.2
AUR62008640 Chenopodium quinoa HOM05D021513 ORTHO05D007257 1.6e-08 63.9 127 38.6
AUR62033124 Chenopodium quinoa HOM05D021513 ORTHO05D007257 2.0e-08 63.5 174 31.6
Sp4g28690 Schrenkiella parvula HOM05D012720 ORTHO05D007257 2.0e-08 63.5 64 50.0
AT2G46640 Arabidopsis thaliana HOM05D012720 ORTHO05D007257 2.7e-08 63.2 66 51.5
ClCG06G002790 Citrullus lanatus HOM05D007199 ORTHO05D007257 3.5e-08 62.8 89 50.6
Sopen10g005110 Solanum pennellii HOM05D007199 ORTHO05D007257 3.5e-08 62.8 78 46.2
BolC4t21784H Brassica oleracea HOM05D012720 ORTHO05D007257 4.5e-08 62.4 79 45.6
Solyc10g009320.3 Solanum lycopersicum HOM05D007199 ORTHO05D007257 4.5e-08 62.4 94 41.5
MSTRG.17369 Avicennia marina HOM05D007199 ORTHO05D007257 5.9e-08 62.0 242 28.5
CANSAT56G1498 Cannabis sativa HOM05D007199 ORTHO05D007257 5.9e-08 62.0 113 42.5
Rhsim01G0176600 Rhododendron simsii HOM05D007199 ORTHO05D007257 7.7e-08 61.6 276 29.0
A05p01150 Brassica napus HOM05D012720 ORTHO05D007257 1.3e-07 60.8 79 44.3
Lsat_1_v5_gn_4_32721 Lactuca sativa HOM05D007199 ORTHO05D007257 1.7e-07 60.5 66 51.5
Actinidia25657 Actinidia chinensis HOM05D007199 ORTHO05D007257 2.9e-07 59.7 91 40.7
BraA05t19115Z Brassica rapa HOM05D012720 ORTHO05D007257 2.9e-07 59.7 78 43.6
PGSC0003DMG400005529 Solanum tuberosum HOM05D007199 ORTHO05D007257 5.0e-07 58.9 83 43.4
vmacro12588 Vaccinium macrocarpon HOM05D007199 ORTHO05D007257 1.1e-06 57.8 97 43.3
Peaxi162Scf00087g00199 Petunia axillaris HOM05D007199 ORTHO05D007257 2.5e-06 56.6 109 38.5
Aqoxy5G04262 Aquilegia oxysepala HOM05D007199 ORTHO05D007257 3.3e-06 56.2 68 45.6
Gorai.008G127500 Gossypium raimondii HOM05D007199 ORTHO05D007257 4.3e-06 55.8 111 40.5


User provided reference genes

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