Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0074100 Salix brachista HOM05D000026 ORTHO05D008596 4.6e-111 404.4 188 100.0
Potri.014G100700 Populus trichocarpa HOM05D000026 ORTHO05D008596 2.2e-68 262.7 173 74.6
Potri.002G173800 Populus trichocarpa HOM05D000026 ORTHO05D008596 5.2e-62 241.5 173 68.8
Manes.05G020900 Manihot esculenta HOM05D000026 ORTHO05D008596 7.5e-53 211.1 173 59.5
GSVIVG01027181001 Vitis vinifera HOM05D000026 ORTHO05D008596 1.7e-52 209.9 173 59.5
MBI04_g28825_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D008596 1.8e-51 206.5 173 56.1
Cfa003780 Carpinus fangiana HOM05D000026 ORTHO05D008596 7.0e-51 204.5 173 58.4
Dinv32607 Davidia involucrata HOM05D000026 ORTHO05D008596 1.0e-49 200.7 173 57.8
Hma1.2p1_0101F.1_g049146 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.3e-49 200.3 173 58.4
Hma1.2p1_2584F.1_g324890 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.3e-49 200.3 173 58.4
FAN10G2309 Fragaria x ananassa HOM05D000026 ORTHO05D000127 1.7e-49 199.9 173 58.4
Gohir.A07G136500 Gossypium hirsutum HOM05D000026 ORTHO05D008596 2.3e-49 199.5 180 61.1
FAN10G3002 Fragaria x ananassa HOM05D000026 ORTHO05D008596 3.9e-49 198.7 173 57.8
Gohir.D07G141900 Gossypium hirsutum HOM05D000026 ORTHO05D008596 3.9e-49 198.7 180 61.1
Gorai.001G153500 Gossypium raimondii HOM05D000026 ORTHO05D008596 3.9e-49 198.7 180 61.1
CANSAT56G3067 Cannabis sativa HOM05D000026 ORTHO05D008596 6.6e-49 198.0 173 56.6
Cpa.g.sc96.56 Carica papaya HOM05D000026 ORTHO05D008596 6.6e-49 198.0 171 59.1
Hund27184 Selenicereus undatus HOM05D000026 ORTHO05D008596 8.6e-49 197.6 173 56.1
FvH4_7g16970 Fragaria vesca HOM05D000026 ORTHO05D008596 1.1e-48 197.2 173 57.8
FAN06G4713 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.1e-48 197.2 173 57.8
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.1e-48 197.2 172 57.6
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 1.1e-48 197.2 172 57.6
RcHm_v2.0_Chr1g0360221 Rosa chinensis HOM05D000026 ORTHO05D008596 1.1e-48 197.2 173 57.8
FAN06G2200 Fragaria x ananassa HOM05D000026 ORTHO05D008596 2.5e-48 196.1 173 57.2
Thecc.01G339500 Theobroma cacao HOM05D000026 ORTHO05D008596 2.5e-48 196.1 175 58.9
QL08p045855 Quercus lobata HOM05D000026 ORTHO05D008596 4.3e-48 195.3 172 56.4
Atru.chr5.703 Acer truncatum HOM05D000026 ORTHO05D008596 7.3e-48 194.5 187 53.5
Prupe.2G192000 Prunus persica HOM05D000026 ORTHO05D008596 9.5e-48 194.1 173 56.1
TWI59G0194 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 9.5e-48 194.1 188 52.1
CSS0047897 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D008596 3.6e-47 192.2 173 56.1
Lj7A496T103 Lonicera japonica HOM05D000026 ORTHO05D008596 8.0e-47 191.0 173 55.5
EL10Ac1g00239 Beta vulgaris HOM05D000026 ORTHO05D008596 1.1e-46 190.7 173 54.9
TAR629G1880 Trochodendron aralioides HOM05D000026 ORTHO05D008596 1.1e-46 190.7 173 54.9
AUR62004514 Chenopodium quinoa HOM05D000026 ORTHO05D008596 1.8e-46 189.9 173 54.3
MSTRG.28272 Avicennia marina HOM05D000026 ORTHO05D008596 2.3e-46 189.5 173 54.9
CiPaw.01G078200 Carya illinoinensis HOM05D000026 ORTHO05D008596 2.3e-46 189.5 171 55.6
HanXRQChr16g0524761 Helianthus annuus HOM05D000026 ORTHO05D008596 3.1e-46 189.1 174 58.0
TWI23G0686 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 4.0e-46 188.7 174 54.6
Cc02_g39620 Coffea canephora HOM05D000026 ORTHO05D008596 2.0e-45 186.4 173 52.6
Lsat_1_v5_gn_4_30860 Lactuca sativa HOM05D000026 ORTHO05D008596 2.0e-45 186.4 174 55.2
FAN01G2684 Fragaria x ananassa HOM05D000026 ORTHO05D008596 2.6e-45 186.0 191 52.4
Rhsim01G0174600 Rhododendron simsii HOM05D000026 ORTHO05D008596 2.6e-45 186.0 172 54.7
Oeu004961.1 Olea europaea HOM05D000026 ORTHO05D008596 3.4e-45 185.7 172 53.5
MD01G1084300 Malus domestica HOM05D000026 ORTHO05D008596 7.5e-45 184.5 173 52.0
PGR031G0964 Punica granatum HOM05D000026 ORTHO05D008596 9.8e-45 184.1 173 53.2
vmacro12664 Vaccinium macrocarpon HOM05D000026 ORTHO05D008596 9.8e-45 184.1 173 53.2
Aqoxy5G04296 Aquilegia oxysepala HOM05D000026 ORTHO05D008596 1.7e-44 183.3 173 52.0
Lalb_Chr10g0100681 Lupinus albus HOM05D000026 ORTHO05D008596 2.9e-44 182.6 173 54.3
Medtr8g027365 Medicago truncatula HOM05D000026 ORTHO05D008596 4.9e-44 181.8 173 54.3
Glyma.16G023100 Glycine max HOM05D000026 ORTHO05D008596 6.4e-44 181.4 173 54.3
ECA234G0680 Erigeron canadensis HOM05D000026 ORTHO05D008596 1.1e-43 180.6 175 55.4
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea HOM05D000026 ORTHO05D008596 1.9e-43 179.9 175 53.1
Phvul.010G115400 Phaseolus vulgaris HOM05D000026 ORTHO05D008596 3.2e-43 179.1 173 52.6
DCAR_006978 Daucus carota HOM05D000026 ORTHO05D008596 4.1e-43 178.7 173 53.2
Nitab4.5_0000258g0260 Nicotiana tabacum HOM05D000026 ORTHO05D008596 5.4e-43 178.3 173 50.9
AT2G46580 Arabidopsis thaliana HOM05D000026 ORTHO05D008596 1.2e-42 177.2 173 49.1
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea HOM05D000026 ORTHO05D008596 1.2e-42 177.2 175 52.6
SGA_v2.0_scaffold232G43545 Striga asiatica HOM05D000026 ORTHO05D008596 1.6e-42 176.8 175 53.1
Carub.0004s2930 Capsella rubella HOM05D000026 ORTHO05D008596 4.6e-42 175.3 173 49.1
Ca_23515_v3 Cicer arietinum L. HOM05D000026 ORTHO05D008596 4.6e-42 175.3 171 52.0
PSO063G7217 Papaver somniferum HOM05D000026 ORTHO05D008596 7.8e-42 174.5 173 49.7
VMungo0331G1134 Vigna mungo HOM05D000026 ORTHO05D008596 1.0e-41 174.1 173 52.0
AL4G46010 Arabidopsis lyrata HOM05D000026 ORTHO05D008596 1.3e-41 173.7 173 48.6
Nitab4.5_0003865g0100 Nicotiana tabacum HOM05D000026 ORTHO05D008596 1.3e-41 173.7 174 49.4
THA.LOC104827623 Tarenaya hassleriana HOM05D000026 ORTHO05D008596 1.7e-41 173.3 174 49.4
Thhalv10001639m.g Eutrema salsugineum HOM05D000026 ORTHO05D008596 2.3e-41 172.9 173 50.3
A04p34480 Brassica napus HOM05D000026 ORTHO05D008596 3.0e-41 172.6 173 47.4
BraA04t18906Z Brassica rapa HOM05D000026 ORTHO05D008596 3.0e-41 172.6 173 47.4
CARHR141930 Cardamine hirsuta HOM05D000026 ORTHO05D008596 3.9e-41 172.2 173 48.6
TPR.G20231 Trifolium pratense HOM05D000026 ORTHO05D008596 3.9e-41 172.2 171 52.0
Lj3g0003520 Lotus japonicus HOM05D000026 ORTHO05D008596 6.6e-41 171.4 173 51.4
Eucgr.D02387 Eucalyptus grandis HOM05D000026 ORTHO05D008596 1.1e-40 170.6 173 51.4
Os03g0115500 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D008596 1.5e-40 170.2 173 49.1
FAN03G0355 Fragaria x ananassa HOM05D000026 ORTHO05D008596 2.5e-40 169.5 161 54.7
COL.COLO4_06235 Corchorus olitorius HOM05D000026 ORTHO05D008596 1.2e-39 167.2 144 57.6
Ciclev10022329m.g Citrus clementina HOM05D000026 ORTHO05D008596 1.6e-39 166.8 172 50.0
Sed0016971 Sechium edule HOM05D000026 ORTHO05D008596 3.6e-39 165.6 173 47.4
Zm00001eb001050 Zea mays HOM05D000026 ORTHO05D008596 3.6e-39 165.6 173 47.4
Aa31LG1G27980 Aethionema arabicum HOM05D000026 ORTHO05D008596 4.7e-39 165.2 168 48.8
unitig_21.g20560 Utricularia gibba HOM05D000026 ORTHO05D008596 6.2e-39 164.9 177 49.7
Duzib133G0719 Durio zibethinus HOM05D000026 ORTHO05D008596 8.1e-39 164.5 140 59.3
C04p72250 Brassica napus HOM05D000026 ORTHO05D008596 1.8e-38 163.3 173 46.2
BolC4t28712H Brassica oleracea HOM05D000026 ORTHO05D008596 1.8e-38 163.3 173 46.2
Migut.N01531 Erythranthe guttata HOM05D000026 ORTHO05D008596 2.3e-38 162.9 174 49.4
Solyc05g050530.3 Solanum lycopersicum HOM05D000026 ORTHO05D008596 2.3e-38 162.9 160 50.6
Sopen05g028950 Solanum pennellii HOM05D000026 ORTHO05D008596 2.3e-38 162.9 160 50.6
CAN.G360.5 Capsicum annuum HOM05D000026 ORTHO05D008596 3.1e-38 162.5 172 48.8
BcaNung06661 Brassica carinata HOM05D000026 ORTHO05D008596 5.2e-38 161.8 177 45.2
BcaC02g07019 Brassica carinata HOM05D000026 ORTHO05D008596 8.9e-38 161.0 173 45.7
PSO170G4931 Papaver somniferum HOM05D000026 ORTHO05D008596 2.0e-37 159.8 166 48.2
Sp4g28630 Schrenkiella parvula HOM05D000026 ORTHO05D008596 2.0e-37 159.8 170 46.5
MELO3C006011.2 Cucumis melo HOM05D000026 ORTHO05D008596 4.4e-37 158.7 173 47.4
BcaC02g07042 Brassica carinata HOM05D000026 ORTHO05D008596 7.5e-37 157.9 168 47.0
CsaV3_3G007930 Cucumis sativus L. HOM05D000026 ORTHO05D008596 3.7e-36 155.6 173 46.2
Sabra02G0139600 Salix brachista HOM05D000026 ORTHO05D008596 6.4e-36 154.8 102 72.5
SEGI_21315 Sequoiadendron giganteum HOM05D000026 ORTHO05D008596 1.1e-35 154.1 173 43.9
Peaxi162Scf00716g00425 Petunia axillaris HOM05D000026 ORTHO05D008596 4.1e-35 152.1 161 47.8
CDE02G1978 Ceratophyllum demersum HOM05D000026 ORTHO05D008596 2.7e-34 149.4 173 43.9
Hma1.2p1_0101F.1_g049160 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 6.6e-33 144.8 131 58.0
PGSC0003DMG400007008 Solanum tuberosum HOM05D000026 ORTHO05D008596 4.7e-31 138.7 140 49.3
AUR62022739 Chenopodium quinoa HOM05D000026 ORTHO05D008596 1.5e-29 133.7 92 67.4
ClCG05G000710 Citrullus lanatus HOM05D000026 ORTHO05D008596 3.8e-28 129.0 193 40.4
Actinidia28110 Actinidia chinensis HOM05D000026 ORTHO05D008596 2.4e-27 126.3 140 47.9
Nn1g00327 Nelumbo nucifera HOM05D000026 ORTHO05D008596 3.0e-25 119.4 91 57.1
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 1.1e-24 117.5 182 35.7
Mapoly0085s0082 Marchantia polymorpha HOM05D000026 ORTHO05D008596 2.5e-24 116.3 177 37.9
SMO119G0236 Selaginella moellendorffii HOM05D000026 ORTHO05D008596 9.6e-24 114.4 183 35.0
HPP92_015098 Vanilla planifolia HOM05D000026 ORTHO05D008596 2.8e-23 112.8 150 42.0
Pp3c7_90 Physcomitrium patens HOM05D000026 ORTHO05D008596 5.2e-22 108.6 173 32.4
Sc01g0002470 Simmondsia chinensis HOM05D000026 ORTHO05D008596 3.3e-16 89.4 44 81.8
Actinidia28403 Actinidia chinensis HOM05D000026 ORTHO05D008596 1.1e-14 84.3 44 79.5
Zm00001eb244850 Zea mays HOM05D017471 ORTHO05D012887 2.4e-14 83.2 113 41.6
Zm00001eb123990 Zea mays HOM05D000026 ORTHO05D012887 5.3e-14 82.0 81 50.6
CBR_g3312 Chara braunii HOM05D000026 ORTHO05D008596 2.2e-12 76.6 197 30.5
Hund19453 Selenicereus undatus HOM05D004066 ORTHO05D008596 8.4e-12 74.7 53 60.4
Cre02.g095100 Chlamydomonas reinhardtii HOM05D000026 ORTHO05D008596 1.3e-09 67.4 188 27.7
MCO05G651 Micromonas commoda HOM05D000026 ORTHO05D008596 1.9e-08 63.5 178 24.2
TAR636G3419 Trochodendron aralioides HOM05D000026 ORTHO05D008596 9.6e-08 61.2 33 75.8


User provided reference genes

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