Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 5.8e-149 530.8 256 100.0
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 7.8e-61 238.0 286 50.7
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 2.4e-57 226.5 286 49.3
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 2.2e-55 219.9 290 46.6
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 5.4e-54 215.3 284 44.4
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 4.6e-53 212.2 283 43.8
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 5.1e-52 208.8 283 44.9
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 6.6e-52 208.4 283 44.2
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 6.6e-52 208.4 283 42.8
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 6.6e-52 208.4 284 43.3
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 1.1e-51 207.6 301 42.5
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 2.5e-51 206.5 284 44.4
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 5.6e-51 205.3 286 42.3
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 5.6e-51 205.3 285 43.5
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 2.8e-50 203.0 273 44.3
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 6.2e-50 201.8 286 43.4
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 1.8e-49 200.3 284 42.6
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 4.0e-49 199.1 277 45.8
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 4.0e-49 199.1 283 41.7
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 9.0e-49 198.0 286 43.4
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 2.0e-48 196.8 283 41.0
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.0e-48 196.8 283 41.0
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.0e-48 196.8 283 41.0
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.4e-48 196.1 283 41.0
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 3.4e-48 196.1 296 41.2
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 5.8e-48 195.3 283 39.9
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.3e-47 194.1 283 40.6
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 1.3e-47 194.1 283 40.6
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 2.2e-47 193.4 286 41.6
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 1.4e-46 190.7 288 41.3
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 2.4e-46 189.9 284 42.3
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 5.4e-46 188.7 287 41.1
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 1.6e-45 187.2 199 51.3
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 1.6e-45 187.2 281 39.9
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 4.6e-45 185.7 255 44.7
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 6.0e-45 185.3 275 41.1
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 7.8e-45 184.9 285 40.7
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 3.0e-44 183.0 288 40.6
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 3.9e-44 182.6 263 41.1
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 5.1e-44 182.2 278 42.1
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 8.7e-44 181.4 199 48.7
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 8.7e-44 181.4 287 40.4
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 1.1e-43 181.0 287 40.4
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 1.9e-43 180.3 293 40.6
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 2.5e-43 179.9 283 41.7
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 2.5e-43 179.9 281 39.5
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 2.5e-43 179.9 285 41.1
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 4.3e-43 179.1 279 39.8
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 5.6e-43 178.7 250 42.8
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 5.6e-43 178.7 287 40.1
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 7.3e-43 178.3 279 39.4
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 9.6e-43 177.9 286 39.5
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 1.3e-42 177.6 282 39.7
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 1.6e-42 177.2 275 40.0
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 3.6e-42 176.0 249 43.4
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 3.6e-42 176.0 279 39.8
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 4.8e-42 175.6 248 42.3
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 4.8e-42 175.6 287 39.4
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 6.2e-42 175.3 285 40.4
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 6.2e-42 175.3 285 39.6
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 6.2e-42 175.3 276 39.5
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 6.2e-42 175.3 268 41.0
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 6.2e-42 175.3 248 43.1
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 1.1e-41 174.5 174 54.6
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 1.4e-41 174.1 280 39.6
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 1.4e-41 174.1 276 39.1
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 1.4e-41 174.1 250 42.4
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 2.4e-41 173.3 289 39.1
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 2.4e-41 173.3 250 42.8
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 9.0e-41 171.4 283 38.2
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 9.0e-41 171.4 283 38.2
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 1.5e-40 170.6 279 38.7
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 1.5e-40 170.6 252 42.1
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 2.0e-40 170.2 269 39.0
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 2.6e-40 169.9 284 38.0
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 3.4e-40 169.5 283 37.8
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 3.4e-40 169.5 284 38.7
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 4.5e-40 169.1 250 41.6
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 5.8e-40 168.7 283 37.5
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 5.8e-40 168.7 184 48.4
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 5.8e-40 168.7 295 40.0
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 9.9e-40 167.9 270 39.3
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 8.4e-39 164.9 255 41.2
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 1.4e-38 164.1 319 34.2
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 3.2e-38 162.9 280 38.2
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 5.4e-38 162.2 252 40.1
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 5.4e-38 162.2 259 39.8
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 7.1e-38 161.8 250 40.0
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 9.3e-38 161.4 281 37.4
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 2.1e-37 160.2 250 39.6
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 6.0e-37 158.7 251 39.0
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 8.4e-31 138.3 170 47.1
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 1.9e-30 137.1 249 36.1
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.1e-29 133.7 111 55.9
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 1.3e-28 131.0 258 31.8
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 1.8e-28 130.6 291 32.3
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 1.8e-28 130.6 247 35.6
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 1.5e-27 127.5 252 34.5
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 9.0e-25 118.2 162 44.4
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 1.2e-24 117.9 126 52.4
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 5.8e-24 115.5 84 63.1
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 1.3e-18 97.8 194 35.1
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 2.2e-18 97.1 189 36.0
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 3.7e-18 96.3 214 33.6
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 1.4e-17 94.4 102 50.0
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 6.9e-17 92.0 149 38.3
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 4.5e-16 89.4 145 38.6
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 1.9e-14 84.0 194 31.4
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 2.1e-13 80.5 162 32.1
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 3.9e-12 76.3 174 34.5
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 4.3e-11 72.8 135 34.1
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 5.7e-11 72.4 148 32.4
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 2.0e-08 63.9 149 34.2
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 6.5e-07 58.9 53 49.1


User provided reference genes

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