Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0054700 Salix brachista HOM05D006557 ORTHO05D008177 3.0e-176 621.7 310 100.0
Potri.014G077700 Populus trichocarpa HOM05D006557 ORTHO05D008177 1.9e-125 453.0 270 84.4
Manes.01G262900 Manihot esculenta HOM05D006557 ORTHO05D008177 6.3e-97 358.2 275 67.3
Thecc.01G369600 Theobroma cacao HOM05D006557 ORTHO05D008177 9.7e-90 334.3 297 59.6
Gohir.D07G150201 Gossypium hirsutum HOM05D006557 ORTHO05D008177 9.1e-88 327.8 273 61.9
Gorai.001G172000 Gossypium raimondii HOM05D006557 ORTHO05D008177 9.1e-88 327.8 273 61.9
CSS0001854 Camellia sinensis var. sinensis HOM05D006557 ORTHO05D008177 3.4e-87 325.9 269 61.7
Cfa004174 Carpinus fangiana HOM05D006557 ORTHO05D008177 1.3e-86 323.9 272 64.3
TAR375G0852 Trochodendron aralioides HOM05D006557 ORTHO05D008177 1.3e-86 323.9 269 62.8
TWI23G0976 Tripterygium wilfordii HOM05D006557 ORTHO05D008177 5.0e-86 322.0 272 62.5
Gohir.A07G144300 Gossypium hirsutum HOM05D006557 ORTHO05D008177 6.5e-86 321.6 273 61.5
CiPaw.01G052200 Carya illinoinensis HOM05D006557 ORTHO05D008177 8.5e-86 321.2 277 61.7
Prupe.2G153600 Prunus persica HOM05D006557 ORTHO05D008177 1.9e-85 320.1 280 60.7
PSO478G0993 Papaver somniferum HOM05D006557 ORTHO05D008177 2.5e-85 319.7 270 61.9
FvH4_7g12930 Fragaria vesca HOM05D006557 ORTHO05D008177 4.2e-85 318.9 274 59.1
Nitab4.5_0006706g0040 Nicotiana tabacum HOM05D006557 ORTHO05D008177 7.2e-85 318.2 269 59.9
GSVIVG01026363001 Vitis vinifera HOM05D006557 ORTHO05D008177 9.4e-85 317.8 272 62.9
Oeu058605.1 Olea europaea HOM05D006557 ORTHO05D008177 1.2e-84 317.4 272 57.0
FAN03G1058 Fragaria x ananassa HOM05D006557 ORTHO05D008177 1.6e-84 317.0 275 58.9
FAN06G2259 Fragaria x ananassa HOM05D006557 ORTHO05D008177 2.1e-84 316.6 275 58.9
CANSAT56G3931 Cannabis sativa HOM05D006557 ORTHO05D008177 4.7e-84 315.5 279 59.1
Actinidia33449 Actinidia chinensis HOM05D006557 ORTHO05D008177 6.1e-84 315.1 272 60.7
Solyc01g091860.4 Solanum lycopersicum HOM05D006557 ORTHO05D008177 8.0e-84 314.7 269 59.9
RcHm_v2.0_Chr1g0352061 Rosa chinensis HOM05D006557 ORTHO05D008177 1.4e-83 313.9 278 58.6
Nitab4.5_0009025g0010 Nicotiana tabacum HOM05D006557 ORTHO05D008177 5.2e-83 312.0 282 57.1
PGSC0003DMG400000131 Solanum tuberosum HOM05D006557 ORTHO05D008177 5.2e-83 312.0 269 58.7
Cc02_g37160 Coffea canephora HOM05D006557 ORTHO05D008177 8.8e-83 311.2 272 59.9
Lalb_Chr01g0021061 Lupinus albus HOM05D006557 ORTHO05D008177 8.8e-83 311.2 275 59.3
Lsat_1_v5_gn_7_8181 Lactuca sativa HOM05D006557 ORTHO05D008177 1.1e-82 310.8 272 59.9
Ciclev10019481m.g Citrus clementina HOM05D006557 ORTHO05D008177 2.0e-82 310.1 278 60.4
Glyma.18G228300 Glycine max HOM05D006557 ORTHO05D008177 2.0e-82 310.1 278 58.6
Sopen01g037630 Solanum pennellii HOM05D006557 ORTHO05D008177 2.6e-82 309.7 269 58.7
FAN01G0615 Fragaria x ananassa HOM05D006557 ORTHO05D008177 3.3e-82 309.3 275 57.1
Sed0001202 Sechium edule HOM05D006557 ORTHO05D008177 3.3e-82 309.3 275 59.3
Nn6g34278 Nelumbo nucifera HOM05D006557 ORTHO05D008177 4.4e-82 308.9 269 59.1
Aa31LG1G11240 Aethionema arabicum HOM05D006557 ORTHO05D008177 5.7e-82 308.5 270 59.6
Haze_15235 Corylus avellana HOM05D006557 ORTHO05D008177 5.7e-82 308.5 304 57.6
C08p53930 Brassica napus HOM05D006557 ORTHO05D008177 7.4e-82 308.1 269 59.1
BolC8t52906H Brassica oleracea HOM05D006557 ORTHO05D008177 7.4e-82 308.1 269 59.1
MBI04_g40842_MAGBIO Magnolia biondii HOM05D006557 ORTHO05D008177 9.7e-82 307.8 269 61.0
Peaxi162Scf00021g00314 Petunia axillaris HOM05D006557 ORTHO05D008177 1.7e-81 307.0 283 56.5
QL08p050821 Quercus lobata HOM05D006557 ORTHO05D008177 3.7e-81 305.8 270 61.1
FAN10G2465 Fragaria x ananassa HOM05D006557 ORTHO05D008177 4.8e-81 305.4 275 57.5
Glyma.09G263800 Glycine max HOM05D006557 ORTHO05D008177 4.8e-81 305.4 278 58.3
vmacro04846 Vaccinium macrocarpon HOM05D006557 ORTHO05D008177 6.3e-81 305.1 296 54.7
MELO3C024600.2 Cucumis melo HOM05D006557 ORTHO05D008177 8.2e-81 304.7 274 58.8
Medtr7g076590 Medicago truncatula HOM05D006557 ORTHO05D008177 1.1e-80 304.3 269 59.1
Psat3g112120 Pisum sativum HOM05D006557 ORTHO05D008177 1.1e-80 304.3 269 58.4
Aqoxy7G00469 Aquilegia oxysepala HOM05D006557 ORTHO05D008177 1.8e-80 303.5 272 58.8
ClCG01G015140 Citrullus lanatus HOM05D006557 ORTHO05D008177 1.8e-80 303.5 275 58.2
Rhsim01G0154800 Rhododendron simsii HOM05D006557 ORTHO05D008177 1.8e-80 303.5 280 57.1
arahy.Tifrunner.gnm1.ann1.P0RXA9 Arachis hypogaea HOM05D006557 ORTHO05D008177 3.1e-80 302.8 273 56.8
PGR042G0062 Punica granatum HOM05D006557 ORTHO05D008177 3.1e-80 302.8 278 57.9
Atru.chr5.390 Acer truncatum HOM05D006557 ORTHO05D008177 5.3e-80 302.0 275 60.0
Eucgr.E00220 Eucalyptus grandis HOM05D006557 ORTHO05D008177 5.3e-80 302.0 278 58.3
Atru.chr5.396 Acer truncatum HOM05D006557 ORTHO05D008177 1.2e-79 300.8 275 60.0
Thhalv10007294m.g Eutrema salsugineum HOM05D006557 ORTHO05D008177 1.6e-79 300.4 268 58.2
HanXRQChr04g0121771 Helianthus annuus HOM05D006557 ORTHO05D008177 2.6e-79 299.7 274 58.8
AL1G10410 Arabidopsis lyrata HOM05D006557 ORTHO05D008177 3.5e-79 299.3 268 59.3
TPR.G37774 Trifolium pratense HOM05D006557 ORTHO05D008177 3.5e-79 299.3 269 58.7
CsaV3_6G041250 Cucumis sativus L. HOM05D006557 ORTHO05D008177 4.5e-79 298.9 274 57.3
Duzib133G0555 Durio zibethinus HOM05D006557 ORTHO05D008177 4.5e-79 298.9 252 62.3
Phvul.008G069900 Phaseolus vulgaris HOM05D006557 ORTHO05D008177 4.5e-79 298.9 278 56.5
Lj1g0000530 Lotus japonicus HOM05D006557 ORTHO05D008177 5.9e-79 298.5 276 56.9
Sc02g0002240 Simmondsia chinensis HOM05D006557 ORTHO05D008177 5.9e-79 298.5 271 57.2
CARHR000440 Cardamine hirsuta HOM05D006557 ORTHO05D008177 7.7e-79 298.1 268 58.6
Carub.0001s0032 Capsella rubella HOM05D006557 ORTHO05D008177 1.0e-78 297.7 268 57.5
Sp1g00380 Schrenkiella parvula HOM05D006557 ORTHO05D008177 1.7e-78 297.0 268 57.8
BraA09t42268Z Brassica rapa HOM05D006557 ORTHO05D008177 2.2e-78 296.6 293 55.3
FAN10G0459 Fragaria x ananassa HOM05D006557 ORTHO05D008177 3.8e-78 295.8 269 56.1
ECA236G4623 Erigeron canadensis HOM05D006557 ORTHO05D008177 5.0e-78 295.4 272 57.4
Hund27329 Selenicereus undatus HOM05D006557 ORTHO05D008177 5.0e-78 295.4 300 51.3
EL10Ac1g00969 Beta vulgaris HOM05D006557 ORTHO05D008177 6.5e-78 295.0 275 58.9
MSTRG.17229 Avicennia marina HOM05D006557 ORTHO05D008177 1.1e-77 294.3 273 56.0
AUR62033372 Chenopodium quinoa HOM05D006557 ORTHO05D008177 5.5e-77 292.0 269 56.5
Migut.B01677 Erythranthe guttata HOM05D006557 ORTHO05D008177 1.8e-72 276.9 273 54.9
COL.COLO4_12633 Corchorus olitorius HOM05D006557 ORTHO05D008177 7.7e-71 271.6 219 64.8
DCAR_008582 Daucus carota HOM05D006557 ORTHO05D008177 7.2e-69 265.0 241 56.0
ATR0757G115 Amborella trichopoda HOM05D006557 ORTHO05D008177 3.6e-68 262.7 272 53.3
AUR62004285 Chenopodium quinoa HOM05D006557 ORTHO05D008177 1.7e-65 253.8 249 57.0
SalBow3G2355 Salvia bowleyana HOM05D006557 ORTHO05D008177 1.7e-62 243.8 272 50.0
HPP92_025494 Vanilla planifolia HOM05D006557 ORTHO05D008177 3.3e-61 239.6 268 50.7
Dinv32417 Davidia involucrata HOM05D006557 ORTHO05D008177 4.7e-60 235.7 193 63.2
Zm00001eb269430 Zea mays HOM05D006557 ORTHO05D008177 1.0e-59 234.6 269 48.7
Hma1.2p1_0033F.1_g020720 Hydrangea macrophylla HOM05D006557 ORTHO05D008177 4.0e-59 232.6 190 61.6
Os06g0127200 Oryza sativa ssp. japonica HOM05D006557 ORTHO05D008177 4.0e-59 232.6 270 48.5
Lj9A576T36 Lonicera japonica HOM05D006557 ORTHO05D008177 7.5e-58 228.4 199 57.3
HPP92_025368 Vanilla planifolia HOM05D006557 ORTHO05D008177 1.6e-52 210.7 251 47.8
unitig_8.g3814 Utricularia gibba HOM05D006557 ORTHO05D008177 1.5e-50 204.1 314 42.0
Pp3c20_15200 Physcomitrium patens HOM05D006557 ORTHO05D008177 2.7e-47 193.4 273 42.1
Mapoly0052s0068 Marchantia polymorpha HOM05D006557 ORTHO05D008177 2.5e-45 186.8 281 41.6
arahy.Tifrunner.gnm1.ann1.1L2ERA Arachis hypogaea HOM05D006557 ORTHO05D008177 5.6e-45 185.7 127 66.9
AT1G01920 Arabidopsis thaliana HOM05D006557 ORTHO05D008177 4.7e-44 182.6 127 65.4
VMungo1383G3400 Vigna mungo HOM05D006557 ORTHO05D008177 1.5e-42 177.6 128 64.8
CSS0034846 Camellia sinensis var. sinensis HOM05D006557 ORTHO05D008177 5.8e-42 175.6 198 47.5
CDE11G0468 Ceratophyllum demersum HOM05D006557 ORTHO05D008177 6.0e-39 165.6 196 46.9
AagrBONN_evm.TU.Sc2ySwM_228.962 Anthoceros agrestis HOM05D006557 ORTHO05D008177 1.1e-37 161.4 272 37.5
FAN06G3640 Fragaria x ananassa HOM05D006557 ORTHO05D008177 9.5e-37 158.3 275 37.5
CAN.G170.57 Capsicum annuum HOM05D006557 ORTHO05D008177 4.4e-34 149.4 122 63.1
SMO165G0089 Selaginella moellendorffii HOM05D006557 ORTHO05D008177 1.7e-33 147.5 271 35.4
unitig_31.g34034 Utricularia gibba HOM05D006557 ORTHO05D008177 5.2e-27 125.9 210 40.5
Glyma.15G277300 Glycine max HOM05D006557 ORTHO05D008177 7.8e-23 112.1 77 64.9
MD02G1195000 Malus domestica HOM05D006557 ORTHO05D008177 1.0e-22 111.7 151 45.0
SEGI_15167 Sequoiadendron giganteum HOM05D006557 ORTHO05D008177 4.3e-21 106.3 116 49.1
CAN.G170.58 Capsicum annuum HOM05D006557 ORTHO05D008177 9.6e-21 105.1 77 66.2
SEGI_29223 Sequoiadendron giganteum HOM05D006557 ORTHO05D008177 7.8e-15 85.5 136 37.5
Dinv43750 Davidia involucrata HOM05D006557 ORTHO05D008177 3.3e-13 80.1 52 71.2
MD02G1195100 Malus domestica HOM05D006557 ORTHO05D008177 3.3e-13 80.1 44 84.1
Lj9A576G31 Lonicera japonica HOM05D006557 ORTHO05D008177 1.3e-12 78.2 82 51.2
Ca_26123_v3 Cicer arietinum L. HOM05D006557 ORTHO05D008177 1.6e-12 77.8 67 56.7
CBR_g54105 Chara braunii HOM05D006557 ORTHO05D008177 3.9e-06 56.6 359 22.6


User provided reference genes

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