Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0053500 Salix brachista HOM05D001952 ORTHO05D004913 1.8e-170 602.4 299 100.0
Potri.014G074900 Populus trichocarpa HOM05D001952 ORTHO05D004913 2.7e-44 183.3 308 42.9
Sabra14G0053600 Salix brachista HOM05D001952 ORTHO05D004913 1.2e-41 174.5 308 41.6
Manes.05G041100 Manihot esculenta HOM05D001952 ORTHO05D004913 1.2e-31 141.4 305 34.8
QL08p050945 Quercus lobata HOM05D001952 ORTHO05D004913 1.4e-29 134.4 306 35.0
CSS0007104 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 2.1e-28 130.6 312 35.3
COL.COLO4_19760 Corchorus olitorius HOM05D001952 ORTHO05D004913 4.6e-28 129.4 305 33.1
Thecc.07G183300 Theobroma cacao HOM05D001952 ORTHO05D004913 1.0e-27 128.3 305 32.8
Rhsim05G0144200 Rhododendron simsii HOM05D001952 ORTHO05D004913 1.7e-27 127.5 304 33.9
Ciclev10004825m.g Citrus clementina HOM05D001952 ORTHO05D004913 3.0e-27 126.7 249 35.7
vmacro19640 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 3.9e-27 126.3 311 32.5
arahy.Tifrunner.gnm1.ann1.U9VUHP Arachis hypogaea HOM05D001952 ORTHO05D004913 5.1e-27 125.9 307 33.6
arahy.Tifrunner.gnm1.ann1.Z6RYGL Arachis hypogaea HOM05D001952 ORTHO05D004913 5.1e-27 125.9 307 33.6
RcHm_v2.0_Chr1g0313121 Rosa chinensis HOM05D001952 ORTHO05D004913 5.1e-27 125.9 307 34.5
arahy.Tifrunner.gnm1.ann1.7790ZZ Arachis hypogaea HOM05D001952 ORTHO05D004913 6.6e-27 125.6 308 34.1
FAN10G1564 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.1e-26 124.8 306 34.0
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 1.5e-26 124.4 303 34.7
CSS0039830 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 2.5e-26 123.6 312 34.0
FvH4_7g08540 Fragaria vesca HOM05D001952 ORTHO05D004913 2.5e-26 123.6 305 33.4
FAN03G2676 Fragaria x ananassa HOM05D001952 ORTHO05D004913 3.3e-26 123.2 306 33.7
FAN06G4730 Fragaria x ananassa HOM05D001952 ORTHO05D004913 4.3e-26 122.9 306 33.7
CANSAT56G1737 Cannabis sativa HOM05D001952 ORTHO05D004913 7.3e-26 122.1 305 32.1
FAN10G0713 Fragaria x ananassa HOM05D001952 ORTHO05D004913 7.3e-26 122.1 308 32.8
Gohir.D01G084100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 9.5e-26 121.7 305 33.1
RcHm_v2.0_Chr1g0351801 Rosa chinensis HOM05D001952 ORTHO05D004913 1.2e-25 121.3 252 36.9
Lalb_Chr19g0127181 Lupinus albus HOM05D001952 ORTHO05D004913 1.6e-25 120.9 309 34.6
Gorai.002G109800 Gossypium raimondii HOM05D001952 ORTHO05D004913 2.8e-25 120.2 305 33.1
Duzib213G0290 Durio zibethinus HOM05D001952 ORTHO05D004913 4.7e-25 119.4 305 32.8
MD15G1435200 Malus domestica HOM05D001952 ORTHO05D004913 4.7e-25 119.4 305 32.8
Haze_00291 Corylus avellana HOM05D001952 ORTHO05D004913 8.1e-25 118.6 258 35.3
Lj5g0018602 Lotus japonicus HOM05D001952 ORTHO05D004913 1.8e-24 117.5 305 32.1
Gohir.A01G099700 Gossypium hirsutum HOM05D001952 ORTHO05D004913 3.1e-24 116.7 305 32.8
Atru.chr1.534 Acer truncatum HOM05D001952 ORTHO05D004913 4.0e-24 116.3 298 34.2
Gohir.A01G099100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 5.2e-24 115.9 251 35.1
Cpa.g.sc753.2 Carica papaya HOM05D001952 ORTHO05D004913 6.8e-24 115.5 316 30.4
Oeu024552.2 Olea europaea HOM05D001952 ORTHO05D004913 6.8e-24 115.5 306 33.0
TWI34G0947 Tripterygium wilfordii HOM05D001952 ORTHO05D004913 8.9e-24 115.2 307 31.9
AUR62033377 Chenopodium quinoa HOM05D001952 ORTHO05D004913 1.5e-23 114.4 306 32.7
VMungo1383G2849 Vigna mungo HOM05D001952 ORTHO05D004913 2.0e-23 114.0 314 31.8
PGR004G1086 Punica granatum HOM05D001952 ORTHO05D004913 4.4e-23 112.8 314 32.5
FAN06G0866 Fragaria x ananassa HOM05D001952 ORTHO05D004913 7.5e-23 112.1 305 33.4
FvH4_7g12770 Fragaria vesca HOM05D001952 ORTHO05D004913 9.9e-23 111.7 305 33.4
FAN06G0845 Fragaria x ananassa HOM05D001952 ORTHO05D004913 9.9e-23 111.7 305 33.4
Phvul.005G010100 Phaseolus vulgaris HOM05D001952 ORTHO05D005568 1.3e-22 111.3 311 32.2
Hund16968 Selenicereus undatus HOM05D001952 ORTHO05D004913 1.7e-22 110.9 323 30.3
Eucgr.H05060 Eucalyptus grandis HOM05D001952 ORTHO05D004913 2.2e-22 110.5 305 31.5
Gohir.D01G083600 Gossypium hirsutum HOM05D001952 ORTHO05D004913 2.9e-22 110.2 305 31.8
GSVIVG01026499001 Vitis vinifera HOM05D001952 ORTHO05D008796 3.7e-22 109.8 228 36.8
Sed0000408 Sechium edule HOM05D001952 ORTHO05D004913 6.4e-22 109.0 305 31.1
EL10Ac1g00960 Beta vulgaris HOM05D001952 ORTHO05D004913 8.3e-22 108.6 307 31.6
AUR62004280 Chenopodium quinoa HOM05D001952 ORTHO05D004913 1.1e-21 108.2 256 35.2
CAN.G1014.4 Capsicum annuum HOM05D001952 ORTHO05D004913 1.4e-21 107.8 305 29.8
Psat4g209120 Pisum sativum HOM05D001952 ORTHO05D004913 1.9e-21 107.5 304 31.9
Cc02_g37060 Coffea canephora HOM05D001952 ORTHO05D004913 2.4e-21 107.1 249 32.1
Psat3g112920 Pisum sativum HOM05D001952 ORTHO05D004913 2.4e-21 107.1 304 31.9
TAR375G0220 Trochodendron aralioides HOM05D001952 ORTHO05D004913 4.1e-21 106.3 304 29.9
Dinv32411 Davidia involucrata HOM05D001952 ORTHO05D004913 7.1e-21 105.5 142 41.5
TAR624G0159 Trochodendron aralioides HOM05D001952 ORTHO05D004913 9.2e-21 105.1 270 30.0
Ah.05g175860 Amaranthus hybridus HOM05D001952 ORTHO05D004913 1.2e-20 104.8 306 31.4
Glyma.18G215400 Glycine max HOM05D001952 ORTHO05D004913 4.6e-20 102.8 312 30.8
Phvul.005G009900 Phaseolus vulgaris HOM05D001952 ORTHO05D004913 6.0e-20 102.4 289 32.5
Hma1.2p1_0132F.1_g060740 Hydrangea macrophylla HOM05D001952 ORTHO05D004913 7.8e-20 102.1 308 31.2
THA.LOC104801468 Tarenaya hassleriana HOM05D001952 ORTHO05D004913 1.0e-19 101.7 308 28.2
Nitab4.5_0003477g0020 Nicotiana tabacum HOM05D001952 ORTHO05D004913 3.9e-19 99.8 305 29.2
CiPaw.02G175900 Carya illinoinensis HOM05D001952 ORTHO05D004913 6.6e-19 99.0 144 37.5
Aa31LG11G5430 Aethionema arabicum HOM05D001952 ORTHO05D004913 8.6e-19 98.6 312 29.2
SalBow7G2566 Salvia bowleyana HOM05D001952 ORTHO05D004913 8.6e-19 98.6 305 28.5
Lsat_1_v5_gn_7_6921 Lactuca sativa HOM05D001952 ORTHO05D004913 1.9e-18 97.4 258 30.2
Nitab4.5_0000603g0070 Nicotiana tabacum HOM05D001952 ORTHO05D004913 1.9e-18 97.4 305 28.9
MELO3C003326.2 Cucumis melo HOM05D001952 ORTHO05D004913 2.5e-18 97.1 305 28.9
Lj4g0006210 Lotus japonicus HOM05D001952 ORTHO05D004913 2.5e-18 97.1 309 32.7
HanXRQChr04g0122171 Helianthus annuus HOM05D001952 ORTHO05D004913 9.5e-18 95.1 302 27.8
Prupe.2G152200 Prunus persica HOM05D001952 ORTHO05D004913 9.5e-18 95.1 144 38.2
AL6G53250 Arabidopsis lyrata HOM05D001952 ORTHO05D004913 1.2e-17 94.7 313 28.8
Peaxi162Scf00231g00244 Petunia axillaris HOM05D001952 ORTHO05D004913 1.2e-17 94.7 303 26.7
Sopen02g025360 Solanum pennellii HOM05D001952 ORTHO05D004913 1.2e-17 94.7 337 27.6
Migut.D01755 Erythranthe guttata HOM05D001952 ORTHO05D004913 3.6e-17 93.2 305 29.5
Migut.L00973 Erythranthe guttata HOM05D001952 ORTHO05D004913 3.6e-17 93.2 306 30.1
FAN01G0405 Fragaria x ananassa HOM05D001952 ORTHO05D004913 3.6e-17 93.2 136 41.9
Peaxi162Scf00207g01356 Petunia axillaris HOM05D001952 ORTHO05D004913 3.6e-17 93.2 303 27.1
Hund09554 Selenicereus undatus HOM05D001952 ORTHO05D004913 3.6e-17 93.2 228 32.5
PGSC0003DMG402027917 Solanum tuberosum HOM05D001952 ORTHO05D004913 6.2e-17 92.4 301 28.9
Sc02g0002270 Simmondsia chinensis HOM05D001952 ORTHO05D004913 8.1e-17 92.0 252 31.0
Solyc02g080650.3 Solanum lycopersicum HOM05D001952 ORTHO05D004913 8.1e-17 92.0 337 26.7
DCAR_006897 Daucus carota HOM05D001952 ORTHO05D004913 1.4e-16 91.3 304 29.3
BolC9t52959H Brassica oleracea HOM05D001952 ORTHO05D004913 1.8e-16 90.9 302 29.5
Glyma.09G276502 Glycine max HOM05D001952 ORTHO05D004913 3.1e-16 90.1 220 33.2
PGSC0003DMG400016476 Solanum tuberosum HOM05D001952 ORTHO05D004913 3.1e-16 90.1 307 28.0
Lj6A55T16 Lonicera japonica HOM05D001952 ORTHO05D004913 5.2e-16 89.4 314 30.3
Migut.L00878 Erythranthe guttata HOM05D001952 ORTHO05D004913 8.9e-16 88.6 250 30.8
SGA_v2.0_scaffold7G04047 Striga asiatica HOM05D001952 ORTHO05D004913 8.9e-16 88.6 248 31.0
Aa31LG4G9800 Aethionema arabicum HOM05D001952 ORTHO05D004913 1.2e-15 88.2 300 29.7
Thhalv10025092m.g Eutrema salsugineum HOM05D001952 ORTHO05D004913 1.2e-15 88.2 304 28.6
Aqoxy5G00703 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 1.5e-15 87.8 300 27.3
CARHR248310 Cardamine hirsuta HOM05D001952 ORTHO05D004913 1.5e-15 87.8 316 27.8
ECA236G1094 Erigeron canadensis HOM05D001952 ORTHO05D004913 1.5e-15 87.8 306 28.1
Medtr7g075940 Medicago truncatula HOM05D001952 ORTHO05D004913 1.5e-15 87.8 306 27.1
CsaV3_3G049900 Cucumis sativus L. HOM05D001952 ORTHO05D004913 2.0e-15 87.4 144 36.1
A09p00620 Brassica napus HOM05D001952 ORTHO05D004913 4.4e-15 86.3 298 31.5
Carub.0005s0957 Capsella rubella HOM05D001952 ORTHO05D004913 4.4e-15 86.3 313 27.8
Carub.0006s2681 Capsella rubella HOM05D001952 ORTHO05D004913 5.8e-15 85.9 310 28.4
ClCG09G012850 Citrullus lanatus HOM05D001952 ORTHO05D004913 5.8e-15 85.9 305 29.2
Aqoxy2G02797 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 7.6e-15 85.5 305 27.5
C09p00240 Brassica napus HOM05D001952 ORTHO05D004913 7.6e-15 85.5 298 31.5
MBI17_g11655_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 7.6e-15 85.5 316 27.8
AT4G00231 Arabidopsis thaliana HOM05D001952 ORTHO05D004913 1.3e-14 84.7 316 26.9
Aa31LG10G10140 Aethionema arabicum HOM05D001952 ORTHO05D004913 1.7e-14 84.3 298 27.9
BraA09t35698Z Brassica rapa HOM05D001952 ORTHO05D004913 1.7e-14 84.3 301 30.9
Migut.D01751 Erythranthe guttata HOM05D001952 ORTHO05D004913 1.7e-14 84.3 211 32.7
MBI05_g28393_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 1.7e-14 84.3 314 28.3
BcaB01g02233 Brassica carinata HOM05D001952 ORTHO05D004913 2.2e-14 84.0 294 29.9
Sp6g00320 Schrenkiella parvula HOM05D001952 ORTHO05D004913 2.9e-14 83.6 310 28.7
BcaC04g24187 Brassica carinata HOM05D001952 ORTHO05D004913 6.4e-14 82.4 296 30.4
unitig_0.g170 Utricularia gibba HOM05D001952 ORTHO05D004913 5.4e-13 79.3 301 28.2
TPR.G34267 Trifolium pratense HOM05D001952 ORTHO05D004913 3.9e-11 73.2 159 33.3
Eucgr.I00835 Eucalyptus grandis HOM05D001952 ORTHO05D004913 4.3e-10 69.7 157 32.5
MD02G1196600 Malus domestica HOM05D001952 ORTHO05D004913 4.3e-10 69.7 182 29.7
vmacro08923 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 9.6e-10 68.6 63 50.8
Gorai.002G109400 Gossypium raimondii HOM05D001952 ORTHO05D004913 2.1e-09 67.4 55 58.2
Eucgr.I00845 Eucalyptus grandis HOM05D001952 ORTHO05D004913 6.9e-08 62.4 138 31.9
ATR0820G267 Amborella trichopoda HOM05D001952 ORTHO05D004913 9.0e-08 62.0 198 29.3
PSO782G1679 Papaver somniferum HOM05D001952 ORTHO05D004913 9.0e-08 62.0 246 24.4
HPP92_001565 Vanilla planifolia HOM05D001952 ORTHO05D004913 9.0e-08 62.0 198 26.3
PSO541G2051 Papaver somniferum HOM05D001952 ORTHO05D004913 1.5e-07 61.2 251 24.7
Ca_07851_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 2.0e-07 60.8 50 52.0
CDE01G0692 Ceratophyllum demersum HOM05D001952 ORTHO05D004913 5.8e-07 59.3 153 28.8
PSO478G1189 Papaver somniferum HOM05D001952 ORTHO05D004913 5.8e-07 59.3 246 25.2
PSO781G0092 Papaver somniferum HOM05D001952 ORTHO05D004913 8.4e-06 55.5 195 25.6


User provided reference genes

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