Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0032500 Salix brachista HOM05D001014 ORTHO05D000896 1.6e-84 316.2 184 100.0
Potri.014G044700 Populus trichocarpa HOM05D001014 ORTHO05D000896 1.4e-35 153.7 151 61.6
Potri.014G044600 Populus trichocarpa HOM05D001014 ORTHO05D000896 2.6e-13 79.7 56 75.0
Atru.chr5.168 Acer truncatum HOM05D001014 ORTHO05D037881 5.3e-11 72.0 173 31.8
Manes.05G052800 Manihot esculenta HOM05D001014 ORTHO05D000896 4.5e-10 68.9 63 60.3
Manes.01G271700 Manihot esculenta HOM05D001014 ORTHO05D000896 1.3e-09 67.4 69 53.6
Gohir.A08G059400 Gossypium hirsutum HOM05D001014 ORTHO05D000896 8.5e-09 64.7 58 55.2
Gohir.D08G068600 Gossypium hirsutum HOM05D001014 ORTHO05D000896 8.5e-09 64.7 58 55.2
Gorai.004G071800 Gossypium raimondii HOM05D001014 ORTHO05D000896 8.5e-09 64.7 58 55.2
DCAR_025074 Daucus carota HOM05D001014 ORTHO05D000896 1.1e-08 64.3 63 52.4
Haze_02749 Corylus avellana HOM05D001014 ORTHO05D000896 1.9e-08 63.5 105 40.0
Thecc.01G392000 Theobroma cacao HOM05D001014 ORTHO05D000896 1.9e-08 63.5 54 57.4
TWI23G0475 Tripterygium wilfordii HOM05D001014 ORTHO05D000896 2.5e-08 63.2 52 57.7
Lj5g0003958 Lotus japonicus HOM05D001014 ORTHO05D000896 4.2e-08 62.4 65 55.4
Actinidia35094 Actinidia chinensis HOM05D001014 ORTHO05D000896 1.2e-07 60.8 60 48.3
Dinv44078 Davidia involucrata HOM05D001014 ORTHO05D000896 1.2e-07 60.8 63 54.0
Gohir.A11G076700 Gossypium hirsutum HOM05D001014 ORTHO05D000896 1.2e-07 60.8 54 55.6
QL04p031181 Quercus lobata HOM05D001014 ORTHO05D000896 1.2e-07 60.8 54 57.4
VMungo0251G3271 Vigna mungo HOM05D001014 ORTHO05D000896 1.6e-07 60.5 62 51.6
Cc00_g20450 Coffea canephora HOM05D001014 ORTHO05D000896 2.1e-07 60.1 63 50.8
Phvul.002G317700 Phaseolus vulgaris HOM05D001014 ORTHO05D000896 2.1e-07 60.1 63 52.4
Actinidia18925 Actinidia chinensis HOM05D001014 ORTHO05D000896 2.7e-07 59.7 50 56.0
Gohir.D11G081100 Gossypium hirsutum HOM05D001014 ORTHO05D000896 2.7e-07 59.7 54 53.7
Lalb_Chr24g0397871 Lupinus albus HOM05D001014 ORTHO05D000896 2.7e-07 59.7 74 44.6
Sc14g0007380 Simmondsia chinensis HOM05D001014 ORTHO05D000896 2.7e-07 59.7 56 51.8
HPP92_023130 Vanilla planifolia HOM05D001014 ORTHO05D000896 2.7e-07 59.7 63 44.4
Atru.chr5.167 Acer truncatum HOM05D001014 ORTHO05D037881 3.6e-07 59.3 54 55.6
Dinv15695 Davidia involucrata HOM05D001014 ORTHO05D000896 3.6e-07 59.3 59 50.8
Gorai.007G086800 Gossypium raimondii HOM05D001014 ORTHO05D000896 3.6e-07 59.3 54 51.9
Haze_02801 Corylus avellana HOM05D001014 ORTHO05D000896 4.7e-07 58.9 85 42.4
Potri.014G044800 Populus trichocarpa HOM05D001014 ORTHO05D000896 4.7e-07 58.9 50 60.0
Ca_23130_v3 Cicer arietinum L. HOM05D001014 ORTHO05D000896 6.1e-07 58.5 60 51.7
HanXRQChr06g0168731 Helianthus annuus HOM05D001014 ORTHO05D000896 6.1e-07 58.5 54 55.6
Sabra14G0032600 Salix brachista HOM05D001014 ORTHO05D000896 6.1e-07 58.5 50 60.0
HPP92_008195 Vanilla planifolia HOM05D001014 ORTHO05D000896 6.1e-07 58.5 64 45.3
AL1G39960 Arabidopsis lyrata HOM05D001014 ORTHO05D000896 8.0e-07 58.2 69 42.0
CDE06G1037 Ceratophyllum demersum HOM05D001014 ORTHO05D000896 8.0e-07 58.2 60 53.3
Cc11_g09900 Coffea canephora HOM05D001014 ORTHO05D000896 8.0e-07 58.2 67 47.8
Hma1.2p1_1740F.1_g300031 Hydrangea macrophylla HOM05D001014 ORTHO05D000896 8.0e-07 58.2 60 51.7
Lalb_Chr14g0371061 Lupinus albus HOM05D001014 ORTHO05D000896 8.0e-07 58.2 62 48.4
PGR042G3459 Punica granatum HOM05D001014 ORTHO05D000896 8.0e-07 58.2 48 58.3
Sc04g0006200 Simmondsia chinensis HOM05D001014 ORTHO05D000896 8.0e-07 58.2 60 45.0
arahy.Tifrunner.gnm1.ann1.HJ27AX Arachis hypogaea HOM05D001014 ORTHO05D038819 1.0e-06 57.8 62 46.8
CANSAT01G2118 Cannabis sativa HOM05D001014 ORTHO05D000896 1.0e-06 57.8 68 47.1
Duzib138G0015 Durio zibethinus HOM05D001014 ORTHO05D000896 1.0e-06 57.8 128 36.7
Hma1.2p1_0729F.1_g209500 Hydrangea macrophylla HOM05D001014 ORTHO05D000896 1.0e-06 57.8 60 51.7
Actinidia16667 Actinidia chinensis HOM05D001014 ORTHO05D000896 1.4e-06 57.4 56 50.0
arahy.Tifrunner.gnm1.ann1.7A1A6G Arachis hypogaea HOM05D001014 ORTHO05D000896 1.4e-06 57.4 62 48.4
arahy.Tifrunner.gnm1.ann1.AGG1KT Arachis hypogaea HOM05D001014 ORTHO05D038819 1.4e-06 57.4 62 46.8
arahy.Tifrunner.gnm1.ann1.YV2IKS Arachis hypogaea HOM05D001014 ORTHO05D000896 1.4e-06 57.4 62 48.4
Duzib133G1174 Durio zibethinus HOM05D001014 ORTHO05D000896 1.4e-06 57.4 54 55.6
Psat4g225560 Pisum sativum HOM05D001014 ORTHO05D000896 1.4e-06 57.4 54 53.7
Potri.002G136200 Populus trichocarpa HOM05D001014 ORTHO05D000896 1.4e-06 57.4 53 56.6
Prupe.2G125500 Prunus persica HOM05D001014 ORTHO05D000896 1.4e-06 57.4 60 50.0
Sabra02G0105700 Salix brachista HOM05D001014 ORTHO05D000896 1.4e-06 57.4 53 56.6
CSS0036135 Camellia sinensis var. sinensis HOM05D001014 ORTHO05D000896 1.8e-06 57.0 62 48.4
CDE08G0818 Ceratophyllum demersum HOM05D001014 ORTHO05D000896 1.8e-06 57.0 66 50.0
CDE12G0069 Ceratophyllum demersum HOM05D001014 ORTHO05D000896 1.8e-06 57.0 56 53.6
Lsat_1_v5_gn_4_46740 Lactuca sativa HOM05D001014 ORTHO05D000896 1.8e-06 57.0 63 47.6
Lj3g0024136 Lotus japonicus HOM05D001014 ORTHO05D000896 1.8e-06 57.0 50 58.0
Hund26349 Selenicereus undatus HOM05D001014 ORTHO05D000896 1.8e-06 57.0 56 50.0
TAR371G0250 Trochodendron aralioides HOM05D001014 ORTHO05D000896 1.8e-06 57.0 50 56.0
CSS0007343 Camellia sinensis var. sinensis HOM05D001014 ORTHO05D000896 2.3e-06 56.6 72 43.1
CSS0046084 Camellia sinensis var. sinensis HOM05D001014 ORTHO05D000896 2.3e-06 56.6 56 50.0
Lj2g0011517 Lotus japonicus HOM05D001014 ORTHO05D000896 2.3e-06 56.6 54 51.9
Nn4g23898 Nelumbo nucifera HOM05D001014 ORTHO05D000896 2.3e-06 56.6 67 46.3
Sopen05g004920 Solanum pennellii HOM05D001014 ORTHO05D000896 2.3e-06 56.6 64 46.9
Aqoxy3G02803 Aquilegia oxysepala HOM05D001014 ORTHO05D000896 3.0e-06 56.2 60 51.7
Ca_11149_v3 Cicer arietinum L. HOM05D001014 ORTHO05D000896 3.0e-06 56.2 53 49.1
Duzib248G1557 Durio zibethinus HOM05D001014 ORTHO05D000896 3.0e-06 56.2 60 51.7
Lalb_Chr13g0290451 Lupinus albus HOM05D001014 ORTHO05D000896 3.0e-06 56.2 50 56.0
Nn2g11708 Nelumbo nucifera HOM05D001014 ORTHO05D000896 3.0e-06 56.2 62 50.0
Nn3g17894 Nelumbo nucifera HOM05D001014 ORTHO05D000896 3.0e-06 56.2 63 42.9
Rhsim07G0034400 Rhododendron simsii HOM05D001014 ORTHO05D000896 3.0e-06 56.2 63 52.4
SalBow5G0767 Salvia bowleyana HOM05D001014 ORTHO05D000896 3.0e-06 56.2 60 53.3
SalBow5G2054 Salvia bowleyana HOM05D001014 ORTHO05D000896 3.0e-06 56.2 47 59.6
SalBow5G4056 Salvia bowleyana HOM05D001014 ORTHO05D000896 3.0e-06 56.2 60 53.3
TAR374G1372 Trochodendron aralioides HOM05D001014 ORTHO05D000896 3.0e-06 56.2 50 56.0
arahy.Tifrunner.gnm1.ann1.6XTP94 Arachis hypogaea HOM05D001014 ORTHO05D000896 4.0e-06 55.8 54 50.0
arahy.Tifrunner.gnm1.ann1.FEG3IM Arachis hypogaea HOM05D001014 ORTHO05D000896 4.0e-06 55.8 54 50.0
Cpa.g.sc101.33 Carica papaya HOM05D001014 ORTHO05D000896 4.0e-06 55.8 56 53.6
Lsat_1_v5_gn_7_10501 Lactuca sativa HOM05D001014 ORTHO05D000896 4.0e-06 55.8 54 53.7
Lalb_Chr02g0145861 Lupinus albus HOM05D001014 ORTHO05D000896 4.0e-06 55.8 56 48.2
Medtr1g110370 Medicago truncatula HOM05D001014 ORTHO05D000896 4.0e-06 55.8 53 50.9
PGSC0003DMG400025699 Solanum tuberosum HOM05D001014 ORTHO05D000896 4.0e-06 55.8 63 46.0
Thecc.02G225600 Theobroma cacao HOM05D001014 ORTHO05D000896 4.0e-06 55.8 50 54.0
HPP92_006397 Vanilla planifolia HOM05D001014 ORTHO05D000896 4.0e-06 55.8 52 53.8
GSVIVG01011869001 Vitis vinifera HOM05D001014 ORTHO05D000896 4.0e-06 55.8 63 42.9
arahy.Tifrunner.gnm1.ann1.PRF4ET Arachis hypogaea HOM05D001014 ORTHO05D000896 5.2e-06 55.5 69 44.9
CSS0007170 Camellia sinensis var. sinensis HOM05D001014 ORTHO05D000896 5.2e-06 55.5 56 48.2
CSS0023383 Camellia sinensis var. sinensis HOM05D001014 ORTHO05D000896 5.2e-06 55.5 56 48.2
Gohir.A12G142000 Gossypium hirsutum HOM05D001014 ORTHO05D000896 5.2e-06 55.5 58 46.6
Gorai.008G158100 Gossypium raimondii HOM05D001014 ORTHO05D000896 5.2e-06 55.5 58 46.6
Lj5g0027592 Lotus japonicus HOM05D001014 ORTHO05D000896 5.2e-06 55.5 52 48.1
Manes.01G014000 Manihot esculenta HOM05D001014 ORTHO05D000896 5.2e-06 55.5 50 52.0
Os05g0551600 Oryza sativa ssp. japonica HOM05D001014 ORTHO05D000896 5.2e-06 55.5 61 42.6
Rhsim12G0085500 Rhododendron simsii HOM05D001014 ORTHO05D000896 5.2e-06 55.5 60 45.0
SalBow5G3217 Salvia bowleyana HOM05D001014 ORTHO05D000896 5.2e-06 55.5 53 54.7
Solyc10g039360.2 Solanum lycopersicum HOM05D001014 ORTHO05D000896 5.2e-06 55.5 63 47.6
TAR622G0562 Trochodendron aralioides HOM05D001014 ORTHO05D000896 5.2e-06 55.5 50 56.0
Atru.chr9.869 Acer truncatum HOM05D001014 ORTHO05D000896 6.7e-06 55.1 66 40.9
MSTRG.17141 Avicennia marina HOM05D001014 ORTHO05D000896 6.7e-06 55.1 54 50.0
CAN.G610.63 Capsicum annuum HOM05D001014 ORTHO05D000896 6.7e-06 55.1 62 40.3
CiPaw.12G049600 Carya illinoinensis HOM05D001014 ORTHO05D000896 6.7e-06 55.1 115 33.9
Glyma.07G093600 Glycine max HOM05D001014 ORTHO05D000896 6.7e-06 55.1 54 51.9
Lalb_Chr06g0165981 Lupinus albus HOM05D001014 ORTHO05D000896 6.7e-06 55.1 56 48.2
Oeu035670.1 Olea europaea HOM05D001014 ORTHO05D000896 6.7e-06 55.1 60 51.7
Potri.012G055200 Populus trichocarpa HOM05D001014 ORTHO05D000896 6.7e-06 55.1 54 51.9
SGA_v2.0_scaffold170G38780 Striga asiatica HOM05D001014 ORTHO05D000896 6.7e-06 55.1 56 46.4
TAR374G1540 Trochodendron aralioides HOM05D001014 ORTHO05D000896 6.7e-06 55.1 63 47.6
vmacro13482 Vaccinium macrocarpon HOM05D001014 ORTHO05D000896 6.7e-06 55.1 62 51.6
EL10Ac8g18283 Beta vulgaris HOM05D001014 ORTHO05D000896 8.8e-06 54.7 60 40.0
ECA236G1391 Erigeron canadensis HOM05D001014 ORTHO05D000896 8.8e-06 54.7 54 51.9
Gohir.D12G146900 Gossypium hirsutum HOM05D001014 ORTHO05D000896 8.8e-06 54.7 50 52.0
Lj2g0025548 Lotus japonicus HOM05D001014 ORTHO05D000896 8.8e-06 54.7 54 48.1
Medtr6g008660 Medicago truncatula HOM05D001014 ORTHO05D000896 8.8e-06 54.7 53 47.2
Psat6g225920 Pisum sativum HOM05D001014 ORTHO05D000896 8.8e-06 54.7 54 46.3
PGSC0003DMG400014573 Solanum tuberosum HOM05D001014 ORTHO05D000896 8.8e-06 54.7 54 51.9
TPR.G4867 Trifolium pratense HOM05D001014 ORTHO05D000896 8.8e-06 54.7 52 50.0
vmacro10573 Vaccinium macrocarpon HOM05D001014 ORTHO05D000896 8.8e-06 54.7 54 51.9


User provided reference genes

Program Settings