Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0032200 Salix brachista HOM05D005488 ORTHO05D006568 2.8e-85 318.5 160 100.0
Sabra02G0105500 Salix brachista HOM05D005488 ORTHO05D006568 2.7e-43 179.1 214 54.2
Potri.014G044300 Populus trichocarpa HOM05D005488 ORTHO05D006568 4.2e-36 155.2 195 51.8
Potri.002G135700 Populus trichocarpa HOM05D005488 ORTHO05D006568 1.6e-32 143.3 146 57.5
Manes.05G058400 Manihot esculenta HOM05D005488 ORTHO05D006568 1.1e-31 140.6 144 56.9
CiPaw.13G022100 Carya illinoinensis HOM05D005488 ORTHO05D006568 1.2e-30 137.1 144 55.6
Cfa011024 Carpinus fangiana HOM05D005488 ORTHO05D006568 2.0e-30 136.3 193 46.6
CiPaw.14G016900 Carya illinoinensis HOM05D005488 ORTHO05D006568 2.0e-30 136.3 194 46.4
Cc02_g25610 Coffea canephora HOM05D005488 ORTHO05D006568 2.6e-30 136.0 144 54.2
Oeu012019.1 Olea europaea HOM05D002442 ORTHO05D006568 4.5e-30 135.2 144 53.5
MELO3C022455.2 Cucumis melo HOM05D005488 ORTHO05D006568 5.8e-30 134.8 144 55.6
Oeu034855.1 Olea europaea HOM05D005488 ORTHO05D006568 5.8e-30 134.8 144 53.5
Prupe.2G116500 Prunus persica HOM05D005488 ORTHO05D006568 5.8e-30 134.8 144 54.2
GSVIVG01018352001 Vitis vinifera HOM05D005488 ORTHO05D006568 5.8e-30 134.8 144 53.5
Cpa.g.sc52.71 Carica papaya HOM05D005488 ORTHO05D006568 7.6e-30 134.4 146 53.4
Haze_02901 Corylus avellana HOM05D005488 ORTHO05D006568 3.8e-29 132.1 190 45.8
Sc26g0001760 Simmondsia chinensis HOM05D005488 ORTHO05D006568 3.8e-29 132.1 144 53.5
MSTRG.17108 Avicennia marina HOM05D005488 ORTHO05D006568 4.9e-29 131.7 144 52.8
CSS0036750 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 4.9e-29 131.7 144 51.4
PGR042G2970 Punica granatum HOM05D005488 ORTHO05D006568 8.4e-29 131.0 144 52.8
AUR62013788 Chenopodium quinoa HOM05D005488 ORTHO05D006568 1.1e-28 130.6 144 52.1
AUR62023368 Chenopodium quinoa HOM05D005488 ORTHO05D006568 1.1e-28 130.6 144 52.1
Lj3g0015162 Lotus japonicus HOM05D005488 ORTHO05D006568 1.1e-28 130.6 144 52.1
FvH4_7g08830 Fragaria vesca HOM05D005488 ORTHO05D006568 1.4e-28 130.2 144 52.8
FAN03G1834 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.4e-28 130.2 144 52.8
FAN06G3564 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.4e-28 130.2 144 52.8
TWI23G0236 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 1.4e-28 130.2 145 53.1
FAN01G0908 Fragaria x ananassa HOM05D005488 ORTHO05D006568 1.9e-28 129.8 144 52.1
MD07G1091300 Malus domestica HOM05D005488 ORTHO05D006568 1.9e-28 129.8 144 51.4
RcHm_v2.0_Chr1g0344251 Rosa chinensis HOM05D005488 ORTHO05D006568 1.9e-28 129.8 144 52.1
EL10Ac1g00715 Beta vulgaris HOM05D005488 ORTHO05D006568 2.4e-28 129.4 144 51.4
FAN10G0732 Fragaria x ananassa HOM05D005488 ORTHO05D006568 3.2e-28 129.0 144 52.1
Lalb_Chr03g0040501 Lupinus albus HOM05D005488 ORTHO05D006568 3.2e-28 129.0 191 42.9
PGSC0003DMG400001718 Solanum tuberosum HOM05D005488 ORTHO05D006568 3.2e-28 129.0 144 52.1
Atru.chr5.75 Acer truncatum HOM05D005488 ORTHO05D006568 4.2e-28 128.6 195 44.1
Eucgr.D01184 Eucalyptus grandis HOM05D005488 ORTHO05D006568 4.2e-28 128.6 144 53.5
Lalb_Chr19g0126481 Lupinus albus HOM05D005488 ORTHO05D006568 4.2e-28 128.6 144 51.4
MD02G1223400 Malus domestica HOM05D005488 ORTHO05D006568 4.2e-28 128.6 144 52.1
Aqoxy3G02564 Aquilegia oxysepala HOM05D005488 ORTHO05D006568 5.4e-28 128.3 144 51.4
MELO3C006268.2 Cucumis melo HOM05D005488 ORTHO05D006568 5.4e-28 128.3 146 52.1
DCAR_025027 Daucus carota HOM05D005488 ORTHO05D006568 5.4e-28 128.3 144 52.1
arahy.Tifrunner.gnm1.ann1.L23YUH Arachis hypogaea HOM05D005488 ORTHO05D006568 7.1e-28 127.9 145 53.1
arahy.Tifrunner.gnm1.ann1.LT98XL Arachis hypogaea HOM05D005488 ORTHO05D006568 7.1e-28 127.9 145 53.1
CANSAT25G0013 Cannabis sativa HOM05D005488 ORTHO05D006568 7.1e-28 127.9 144 51.4
Dinv44023 Davidia involucrata HOM05D005488 ORTHO05D006568 7.1e-28 127.9 144 52.1
FAN10G4236 Fragaria x ananassa HOM05D005488 ORTHO05D006568 7.1e-28 127.9 144 52.1
TWI14G1396 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 7.1e-28 127.9 145 53.8
Glyma.03G103600 Glycine max HOM05D005488 ORTHO05D006568 9.3e-28 127.5 144 51.4
ClCG05G002900 Citrullus lanatus HOM05D005488 ORTHO05D006568 1.2e-27 127.1 197 43.7
Solyc01g088610.4 Solanum lycopersicum HOM05D005488 ORTHO05D006568 1.6e-27 126.7 144 50.7
Sopen01g035460 Solanum pennellii HOM05D005488 ORTHO05D006568 1.6e-27 126.7 144 50.7
VMungo0331G0633 Vigna mungo HOM05D005488 ORTHO05D006568 1.6e-27 126.7 144 50.7
Nitab4.5_0004088g0020 Nicotiana tabacum HOM05D005488 ORTHO05D006568 2.1e-27 126.3 144 51.4
Nitab4.5_0005064g0040 Nicotiana tabacum HOM05D005488 ORTHO05D006568 2.1e-27 126.3 144 51.4
Aa31LG1G26190 Aethionema arabicum HOM05D005488 ORTHO05D006568 3.5e-27 125.6 144 49.3
ClCG06G000860 Citrullus lanatus HOM05D005488 ORTHO05D006568 3.5e-27 125.6 144 51.4
PSO782G2409 Papaver somniferum HOM05D005488 ORTHO05D006568 3.5e-27 125.6 144 51.4
Phvul.010G041700 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 3.5e-27 125.6 144 50.0
unitig_26.g8858 Utricularia gibba HOM05D005488 ORTHO05D006568 3.5e-27 125.6 144 48.6
Atru.chr5.44 Acer truncatum HOM05D005488 ORTHO05D006568 4.6e-27 125.2 195 43.1
Os10g0566700 Oryza sativa ssp. japonica HOM05D005488 ORTHO05D006568 4.6e-27 125.2 144 50.0
SGA_v2.0_scaffold52G19266 Striga asiatica HOM05D005488 ORTHO05D006568 4.6e-27 125.2 144 51.4
AL5G42420 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 7.9e-27 124.4 196 42.3
PSO063G2958 Papaver somniferum HOM05D005488 ORTHO05D006568 1.0e-26 124.0 144 50.7
ECA234G4156 Erigeron canadensis HOM05D005488 ORTHO05D006568 1.3e-26 123.6 144 49.3
Medtr8g009280 Medicago truncatula HOM05D005488 ORTHO05D006568 1.3e-26 123.6 193 43.5
Actinidia21613 Actinidia chinensis HOM05D005488 ORTHO05D006568 1.8e-26 123.2 144 51.4
SalBow5G2779 Salvia bowleyana HOM05D005488 ORTHO05D006568 1.8e-26 123.2 144 50.7
Sed0025787 Sechium edule HOM05D005488 ORTHO05D006568 1.8e-26 123.2 146 50.0
CAN.G756.18 Capsicum annuum HOM05D005488 ORTHO05D006568 2.3e-26 122.9 144 49.3
Ca_23141_v3 Cicer arietinum L. HOM05D005488 ORTHO05D006568 2.3e-26 122.9 145 49.7
Gohir.A08G140700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 2.3e-26 122.9 144 50.0
ATR0665G403 Amborella trichopoda HOM05D005488 ORTHO05D006568 3.0e-26 122.5 144 49.3
CsaV3_3G010440 Cucumis sativus L. HOM05D005488 ORTHO05D006568 3.0e-26 122.5 146 50.0
COL.COLO4_12353 Corchorus olitorius HOM05D005488 ORTHO05D006568 3.9e-26 122.1 144 50.0
HanXRQChr16g0522961 Helianthus annuus HOM05D005488 ORTHO05D006568 3.9e-26 122.1 144 49.3
CSS0012976 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 5.1e-26 121.7 144 50.0
Carub.0005s2695 Capsella rubella HOM05D005488 ORTHO05D006568 5.1e-26 121.7 196 42.9
Gohir.D08G161700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 5.1e-26 121.7 144 49.3
Gorai.004G168100 Gossypium raimondii HOM05D005488 ORTHO05D006568 5.1e-26 121.7 144 49.3
Peaxi162Scf00745g00015 Petunia axillaris HOM05D005488 ORTHO05D006568 5.1e-26 121.7 144 49.3
Sed0000336 Sechium edule HOM05D005488 ORTHO05D006568 5.1e-26 121.7 144 50.0
Zm00001eb390720 Zea mays HOM05D005488 ORTHO05D006568 6.7e-26 121.3 144 48.6
THA.LOC104827584 Tarenaya hassleriana HOM05D005488 ORTHO05D006568 8.7e-26 120.9 144 49.3
Migut.B01488 Erythranthe guttata HOM05D005488 ORTHO05D006568 1.1e-25 120.6 145 51.0
Ciclev10022799m.g Citrus clementina HOM05D005488 ORTHO05D006568 1.5e-25 120.2 144 47.9
CSS0010758 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 1.9e-25 119.8 144 49.3
CDE04G3246 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 1.9e-25 119.8 148 48.6
Migut.N01716 Erythranthe guttata HOM05D005488 ORTHO05D006568 1.9e-25 119.8 144 48.6
Thecc.01G402400 Theobroma cacao HOM05D005488 ORTHO05D006568 1.9e-25 119.8 144 48.6
Zm00001eb024030 Zea mays HOM05D005488 ORTHO05D006568 1.9e-25 119.8 145 49.0
AT3G60210 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 2.5e-25 119.4 197 42.1
Hund17125 Selenicereus undatus HOM05D005488 ORTHO05D006568 2.5e-25 119.4 144 47.2
Carub.0004s2720 Capsella rubella HOM05D005488 ORTHO05D006568 4.3e-25 118.6 145 49.0
Nn6g33696 Nelumbo nucifera HOM05D005488 ORTHO05D006568 4.3e-25 118.6 144 48.6
Lsat_1_v5_gn_4_38520 Lactuca sativa HOM05D005488 ORTHO05D006568 5.6e-25 118.2 144 47.9
CDE12G0168 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 9.6e-25 117.5 144 47.2
Psat0s4427g0080 Pisum sativum HOM05D005488 ORTHO05D006568 9.6e-25 117.5 193 42.0
AL4G43700 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 1.3e-24 117.1 145 48.3
HPP92_025708 Vanilla planifolia HOM05D005488 ORTHO05D006568 1.3e-24 117.1 144 45.8
AT2G44650 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 1.6e-24 116.7 145 47.6
Duzib138G1174 Durio zibethinus HOM05D005488 ORTHO05D006568 2.8e-24 115.9 144 47.2
SMO244G0054 Selaginella moellendorffii HOM05D005488 ORTHO05D006568 3.7e-24 115.5 146 44.5
SEGI_24977 Sequoiadendron giganteum HOM05D005488 ORTHO05D006568 3.7e-24 115.5 146 47.3
CARHR139860 Cardamine hirsuta HOM05D005488 ORTHO05D006568 6.2e-24 114.8 145 48.3
TPR.G17350 Trifolium pratense HOM05D005488 ORTHO05D006568 1.4e-23 113.6 144 47.2
CsaV3_6G006710 Cucumis sativus L. HOM05D005488 ORTHO05D001261 5.3e-23 111.7 135 48.1
BcaB02g08840 Brassica carinata HOM05D005488 ORTHO05D006568 3.4e-22 109.0 145 45.5
BcaC02g07105 Brassica carinata HOM05D005488 ORTHO05D006568 3.4e-22 109.0 145 45.5
BolC4t28620H Brassica oleracea HOM05D005488 ORTHO05D006568 3.4e-22 109.0 145 45.5
BraA04t18803Z Brassica rapa HOM05D005488 ORTHO05D006568 3.4e-22 109.0 145 45.5
BraA05t19455Z Brassica rapa HOM05D005488 ORTHO05D006568 3.4e-22 109.0 145 45.5
Thhalv10001677m.g Eutrema salsugineum HOM05D005488 ORTHO05D006568 3.4e-22 109.0 145 45.5
BcaC02g12287 Brassica carinata HOM05D005488 ORTHO05D006568 7.6e-22 107.8 145 44.8
C04p05600 Brassica napus HOM05D005488 ORTHO05D006568 7.6e-22 107.8 145 44.8
BolC4t22190H Brassica oleracea HOM05D005488 ORTHO05D006568 7.6e-22 107.8 145 44.8
QL04p026246 Quercus lobata HOM05D005488 ORTHO05D006568 7.6e-22 107.8 126 49.2
Sp4g26730 Schrenkiella parvula HOM05D005488 ORTHO05D006568 7.6e-22 107.8 145 44.8
unitig_750.g28406 Utricularia gibba HOM05D005488 ORTHO05D006568 9.9e-22 107.5 145 45.5
A05p04790 Brassica napus HOM05D005488 ORTHO05D006568 1.3e-21 107.1 145 44.8
Rhsim01G0143400 Rhododendron simsii HOM05D005488 ORTHO05D006568 4.9e-21 105.1 65 78.5
AagrBONN_evm.TU.Sc2ySwM_117.3656 Anthoceros agrestis HOM05D005488 ORTHO05D006568 4.2e-20 102.1 144 41.7
vmacro21078 Vaccinium macrocarpon HOM05D005488 ORTHO05D006568 1.6e-19 100.1 176 38.6
C04p71170 Brassica napus HOM05D005488 ORTHO05D006568 7.9e-19 97.8 145 44.1
BcaB06g29391 Brassica carinata HOM05D005488 ORTHO05D006568 1.3e-18 97.1 66 74.2
A04p33420 Brassica napus HOM05D005488 ORTHO05D006568 1.3e-18 97.1 145 43.4
Mapoly0181s0002 Marchantia polymorpha HOM05D005488 ORTHO05D006568 1.3e-18 97.1 65 72.3
Zm00001eb071630 Zea mays HOM05D005488 ORTHO05D006568 1.3e-18 97.1 139 44.6
Pp3c2_19170 Physcomitrium patens HOM05D005488 ORTHO05D006568 8.7e-18 94.4 144 37.5
Duzib133G1397 Durio zibethinus HOM05D005488 ORTHO05D006568 8.2e-16 87.8 82 63.4
Pp3c1_20880 Physcomitrium patens HOM05D005488 ORTHO05D006568 1.8e-15 86.7 77 54.5
Gohir.D07G176200 Gossypium hirsutum HOM05D005488 ORTHO05D006568 3.8e-13 79.0 51 76.5
Dinv43589 Davidia involucrata HOM05D005488 ORTHO05D006568 1.2e-11 73.9 40 92.5
MD13G1240800 Malus domestica HOM05D005488 ORTHO05D006568 1.0e-10 70.9 58 67.2
Rhsim03G0098500 Rhododendron simsii HOM05D005488 ORTHO05D006568 2.3e-10 69.7 47 76.6
Glyma.07G120400 Glycine max HOM05D005488 ORTHO05D006568 8.7e-10 67.8 39 82.1
MD00G1150500 Malus domestica HOM05D005488 ORTHO05D006568 1.5e-09 67.0 37 83.8
Gorai.007G266500 Gossypium raimondii HOM05D005488 ORTHO05D006568 7.4e-09 64.7 121 35.5
Phvul.006G055900 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 5.3e-07 58.5 52 63.5


User provided reference genes

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