Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 1.5e-214 749.2 363 100.0
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 5.6e-198 694.1 354 95.2
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 5.2e-135 485.0 379 67.8
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 1.5e-134 483.4 376 67.6
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 2.9e-133 479.2 372 66.1
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 4.1e-132 475.3 372 65.6
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 2.0e-131 473.0 367 66.2
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 7.8e-131 471.1 374 64.7
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 1.3e-130 470.3 372 65.3
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 3.0e-130 469.2 369 64.0
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 8.0e-128 461.1 360 64.4
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 2.3e-127 459.5 362 66.9
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 8.9e-127 457.6 375 62.7
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 2.0e-126 456.4 376 62.5
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 7.5e-126 454.5 380 61.8
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 5.4e-124 448.4 380 60.5
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 7.0e-124 448.0 374 62.8
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 8.6e-122 441.0 382 58.6
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 3.3e-121 439.1 376 61.4
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 2.8e-120 436.0 369 61.2
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 6.2e-120 434.9 373 60.1
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 5.2e-119 431.8 377 60.7
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 4.4e-118 428.7 396 56.1
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 7.5e-118 427.9 377 59.7
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 9.9e-118 427.6 372 58.9
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 1.3e-117 427.2 375 60.5
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 2.4e-116 422.9 375 58.1
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 2.4e-116 422.9 367 60.2
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 4.1e-116 422.2 376 57.4
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 9.2e-116 421.0 368 58.2
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 1.2e-115 420.6 375 59.5
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 2.1e-115 419.9 371 58.8
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 3.5e-115 419.1 349 62.8
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 7.8e-115 417.9 366 59.3
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 1.0e-114 417.5 373 57.9
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 1.7e-114 416.8 378 56.9
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 3.0e-114 416.0 373 57.6
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 4.3e-113 412.1 374 58.8
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 1.6e-112 410.2 375 56.5
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 2.1e-112 409.8 377 56.8
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 2.8e-112 409.5 387 56.6
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 3.6e-112 409.1 329 63.5
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 8.1e-112 407.9 366 57.9
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 1.1e-111 407.5 373 56.3
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 5.2e-111 405.2 371 55.5
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 1.2e-110 404.1 365 57.3
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 2.6e-110 402.9 368 56.8
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 4.4e-110 402.1 373 56.6
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 7.6e-110 401.4 360 57.2
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 7.6e-110 401.4 373 59.0
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 9.9e-110 401.0 375 58.1
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 1.3e-109 400.6 359 57.1
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 4.9e-109 398.7 400 55.0
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 4.9e-109 398.7 400 55.0
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 1.4e-108 397.1 361 57.3
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 1.4e-108 397.1 495 47.7
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 1.9e-108 396.7 372 55.4
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 2.4e-108 396.4 380 54.2
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 7.1e-108 394.8 379 55.4
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 4.6e-107 392.1 365 56.2
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 7.8e-107 391.3 364 56.9
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 7.8e-107 391.3 393 54.7
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 1.0e-106 391.0 365 56.2
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 1.0e-106 391.0 375 54.7
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 1.0e-106 391.0 372 54.3
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 2.3e-106 389.8 366 56.0
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 6.6e-106 388.3 370 57.0
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 3.3e-105 386.0 376 54.5
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 7.3e-105 384.8 367 55.9
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 1.2e-104 384.0 361 56.0
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.6e-104 383.6 401 52.4
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 2.8e-104 382.9 367 55.9
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 3.6e-104 382.5 384 52.9
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 6.2e-104 381.7 380 51.8
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 4.4e-102 375.6 346 56.4
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 1.3e-101 374.0 362 54.4
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 1.3e-101 374.0 371 54.4
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 1.7e-101 373.6 377 52.0
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 1.1e-100 370.9 389 50.9
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 7.1e-100 368.2 365 53.4
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 5.1e-98 362.1 360 53.3
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 1.9e-97 360.1 372 51.3
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 7.3e-97 358.2 351 55.6
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 1.3e-96 357.5 374 51.1
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 9.9e-94 347.8 397 48.4
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 1.6e-88 330.5 369 46.3
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 2.4e-87 326.6 306 56.2
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 6.9e-87 325.1 374 51.1
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.8e-82 310.5 331 52.9
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 1.6e-80 303.9 369 44.2
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 2.8e-80 303.1 389 46.0
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 2.4e-79 300.1 338 50.0
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 2.4e-79 300.1 364 46.2
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 6.5e-77 292.0 362 43.9
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 2.5e-68 263.5 379 39.8
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 3.0e-66 256.5 390 40.3
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 1.2e-62 244.6 222 60.8
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 1.1e-60 238.0 241 48.1
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 1.6e-59 234.2 162 67.9
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 1.7e-53 214.2 221 55.7
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 7.0e-47 192.2 261 42.9
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 5.9e-46 189.1 157 54.1
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 3.6e-43 179.9 220 43.6
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 8.8e-42 175.3 147 52.4
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 2.3e-34 150.6 154 55.2
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 1.1e-28 131.7 145 55.2
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 1.8e-26 124.4 155 49.0
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 5.4e-23 112.8 82 64.6
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 4.7e-11 73.2 92 47.8
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 8.9e-10 68.9 60 58.3


User provided reference genes

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