Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0027900 Salix brachista HOM05D008210 ORTHO05D010078 8.0e-49 196.8 103 100.0
Potri.014G038500 Populus trichocarpa HOM05D008210 ORTHO05D010078 5.4e-37 157.5 104 82.7
Potri.002G130500 Populus trichocarpa HOM05D008210 ORTHO05D010078 2.1e-28 129.0 103 66.0
Manes.05G166500 Manihot esculenta HOM05D008210 ORTHO05D010078 3.9e-19 98.2 104 57.7
Atru.chr13.581 Acer truncatum HOM05D008210 ORTHO05D010078 6.9e-16 87.4 97 50.5
Haze_17600 Corylus avellana HOM05D008210 ORTHO05D010078 1.2e-15 86.7 105 52.4
Cfa018466 Carpinus fangiana HOM05D008210 ORTHO05D010078 2.6e-15 85.5 110 51.8
QL02p006968 Quercus lobata HOM05D008210 ORTHO05D010078 5.8e-15 84.3 80 58.8
Atru.chr13.582 Acer truncatum HOM05D008210 ORTHO05D010078 9.9e-15 83.6 97 47.4
Aqoxy2G03320 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 1.9e-13 79.3 92 47.8
Aqoxy6G00952 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 1.9e-13 79.3 92 47.8
Rhsim06G0039800 Rhododendron simsii HOM05D008210 ORTHO05D010078 3.2e-13 78.6 107 47.7
Thecc.08G019400 Theobroma cacao HOM05D008210 ORTHO05D010078 4.2e-13 78.2 73 56.2
Gorai.010G013900 Gossypium raimondii HOM05D008210 ORTHO05D010078 9.3e-13 77.0 91 47.3
Ciclev10002912m.g Citrus clementina HOM05D008210 ORTHO05D010078 4.6e-12 74.7 80 53.8
TAR381G1599 Trochodendron aralioides HOM05D008210 ORTHO05D010078 6.0e-12 74.3 105 41.9
Prupe.1G386500 Prunus persica HOM05D008210 ORTHO05D010078 7.8e-12 73.9 98 49.0
FAN15G3542 Fragaria x ananassa HOM05D008210 ORTHO05D010078 2.3e-11 72.4 100 49.0
Nn5g29422 Nelumbo nucifera HOM05D008210 ORTHO05D010078 5.1e-11 71.2 101 42.6
FvH4_2g40530 Fragaria vesca HOM05D008210 ORTHO05D010078 6.6e-11 70.9 98 45.9
Hma1.2p1_0023F.1_g015200 Hydrangea macrophylla HOM05D008210 ORTHO05D010078 6.6e-11 70.9 108 47.2
Cpa.g.sc64.23 Carica papaya HOM05D008210 ORTHO05D010078 8.7e-11 70.5 96 45.8
CiPaw.15G068700 Carya illinoinensis HOM05D008210 ORTHO05D010078 8.7e-11 70.5 104 45.2
COL.COLO4_26398 Corchorus olitorius HOM05D008210 ORTHO05D010078 1.1e-10 70.1 74 55.4
RcHm_v2.0_Chr6g0300191 Rosa chinensis HOM05D008210 ORTHO05D010078 1.1e-10 70.1 99 47.5
Gohir.D06G011200 Gossypium hirsutum HOM05D008210 ORTHO05D010078 1.5e-10 69.7 92 43.5
Gohir.A06G013600 Gossypium hirsutum HOM05D008210 ORTHO05D010078 2.5e-10 68.9 91 42.9
Aqoxy6G00950 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 4.3e-10 68.2 76 50.0
SGA_v2.0_scaffold14G07009 Striga asiatica HOM05D008210 ORTHO05D010078 4.3e-10 68.2 104 43.3
GSVIVG01009614001 Vitis vinifera HOM05D008210 ORTHO05D010078 4.3e-10 68.2 103 44.7
Nitab4.5_0000110g0010 Nicotiana tabacum HOM05D008210 ORTHO05D010078 7.3e-10 67.4 97 43.3
VMungo1309G3066 Vigna mungo HOM05D008210 ORTHO05D010078 3.1e-08 62.0 108 38.9
MSTRG.22279 Avicennia marina HOM05D008210 ORTHO05D010078 5.3e-08 61.2 98 39.8
Cc10_g03600 Coffea canephora HOM05D008210 ORTHO05D010078 1.2e-07 60.1 103 41.7
Dinv36022 Davidia involucrata HOM05D000260 ORTHO05D002276 1.2e-07 60.1 89 47.2
Glyma.04G035200 Glycine max HOM05D008210 ORTHO05D010078 1.2e-07 60.1 89 47.2
Phvul.009G061375 Phaseolus vulgaris HOM05D008210 ORTHO05D010078 1.2e-07 60.1 109 40.4
Medtr3g111460 Medicago truncatula HOM05D008210 ORTHO05D010078 1.5e-07 59.7 80 45.0
Ah.09g236870 Amaranthus hybridus HOM05D008210 ORTHO05D010078 2.0e-07 59.3 90 38.9
Ah.09g236890 Amaranthus hybridus HOM05D008210 ORTHO05D010078 2.0e-07 59.3 90 38.9
AL1G53960 Arabidopsis lyrata HOM05D015684 ORTHO05D010078 2.6e-07 58.9 76 42.1
Lsat_1_v5_gn_1_19601 Lactuca sativa HOM05D008210 ORTHO05D010078 3.4e-07 58.5 81 39.5
Eucgr.F01503 Eucalyptus grandis HOM05D008210 ORTHO05D010078 4.5e-07 58.2 101 38.6
TPR.G12346 Trifolium pratense HOM05D008210 ORTHO05D010078 4.5e-07 58.2 110 43.6
MBI16_g31333_MAGBIO Magnolia biondii HOM05D008210 ORTHO05D010078 5.8e-07 57.8 88 37.5
Lj1g0017592 Lotus japonicus HOM05D008210 ORTHO05D010078 9.9e-07 57.0 77 45.5
Nn6g32154 Nelumbo nucifera HOM05D008210 ORTHO05D010078 1.3e-06 56.6 67 47.8
arahy.Tifrunner.gnm1.ann1.KBQ6U1 Arachis hypogaea HOM05D008210 ORTHO05D010078 1.7e-06 56.2 75 46.7
Nn7g37755 Nelumbo nucifera HOM05D008210 ORTHO05D010078 2.9e-06 55.5 86 38.4
Dinv26771 Davidia involucrata HOM05D004524 ORTHO05D005477 6.4e-06 54.3 87 46.0
Psat0s3268g0120 Pisum sativum HOM05D008210 ORTHO05D010078 8.4e-06 53.9 104 44.2


User provided reference genes

Program Settings