Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 1.9e-121 439.1 210 100.0
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 2.2e-101 372.5 210 85.7
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 2.1e-96 355.9 210 82.9
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 4.0e-71 271.9 213 61.0
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 2.0e-70 269.6 209 63.6
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 1.1e-68 263.8 209 65.1
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 5.4e-68 261.5 209 65.6
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 5.4e-68 261.5 209 65.6
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 1.2e-67 260.4 212 63.7
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 2.1e-67 259.6 209 62.7
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 8.6e-66 254.2 211 61.1
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 3.3e-65 252.3 215 58.1
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 4.7e-64 248.4 213 62.4
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 4.7e-64 248.4 214 60.7
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 1.1e-60 237.3 211 59.2
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 1.4e-60 236.9 210 59.5
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 1.4e-60 236.9 210 59.5
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 5.4e-60 235.0 216 55.1
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.6e-59 233.4 216 54.6
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 1.6e-59 233.4 216 54.6
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 1.3e-58 230.3 213 60.1
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 5.1e-58 228.4 219 56.6
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.1e-57 227.3 219 56.2
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 4.3e-57 225.3 213 56.8
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 9.6e-57 224.2 222 57.7
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 1.3e-56 223.8 213 57.3
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 2.8e-56 222.6 227 52.9
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 4.8e-56 221.9 212 52.8
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 4.8e-56 221.9 213 57.3
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 6.2e-56 221.5 212 55.7
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 8.1e-56 221.1 209 55.0
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 8.1e-56 221.1 214 56.1
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 2.4e-55 219.5 210 53.3
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 3.1e-55 219.2 213 58.7
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 3.1e-55 219.2 212 52.4
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 9.0e-55 217.6 209 54.1
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 4.4e-54 215.3 223 52.9
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 5.8e-54 214.9 212 51.4
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 4.9e-53 211.8 213 57.7
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 4.9e-53 211.8 206 53.9
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 4.9e-53 211.8 209 52.6
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 6.4e-53 211.5 204 52.5
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 6.4e-53 211.5 216 52.3
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 1.1e-52 210.7 210 52.9
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 3.2e-52 209.1 205 53.7
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 3.2e-52 209.1 211 53.1
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 5.4e-52 208.4 213 55.4
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 2.1e-51 206.5 213 57.3
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.3e-50 203.8 207 53.1
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 1.7e-50 203.4 198 54.0
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 2.3e-50 203.0 204 51.0
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 8.7e-50 201.1 212 53.8
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 1.1e-49 200.7 208 52.4
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 3.3e-49 199.1 211 51.2
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 4.3e-49 198.7 207 50.2
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 7.3e-49 198.0 160 61.9
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 1.3e-48 197.2 211 53.1
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 1.3e-48 197.2 206 51.0
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.6e-48 196.8 207 50.7
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 2.8e-48 196.1 204 52.0
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 2.8e-48 196.1 214 48.1
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 6.2e-48 194.9 211 51.7
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 3.1e-47 192.6 210 51.0
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 4.0e-47 192.2 208 51.9
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 6.9e-47 191.4 199 50.3
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 3.4e-46 189.1 208 51.0
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 1.4e-44 183.7 209 46.4
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.9e-44 183.3 204 49.5
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 4.2e-44 182.2 196 48.5
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 5.4e-44 181.8 207 49.3
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 9.3e-44 181.0 204 49.5
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 1.2e-43 180.6 237 45.1
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 3.9e-42 175.6 210 47.1
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 2.5e-41 172.9 217 46.1
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 5.6e-41 171.8 218 46.8
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 9.6e-41 171.0 225 42.2
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 6.2e-40 168.3 219 43.8
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 9.0e-39 164.5 195 49.2
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.5e-38 163.7 222 44.1
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 2.6e-38 162.9 221 42.5
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 1.3e-37 160.6 211 45.0
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 1.7e-37 160.2 211 42.7
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 1.9e-36 156.8 204 44.1
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 5.5e-36 155.2 191 47.1
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 9.3e-36 154.5 215 44.2
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 2.3e-34 149.8 212 44.8
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 6.7e-34 148.3 207 40.6
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 5.7e-33 145.2 209 45.0
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 7.4e-33 144.8 140 52.1
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 2.1e-32 143.3 152 50.7
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 2.8e-32 142.9 199 43.7
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.4e-31 140.6 169 49.7
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 1.8e-31 140.2 203 42.4
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 1.8e-31 140.2 195 46.7
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 3.1e-31 139.4 213 45.1
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 2.6e-30 136.3 199 43.7
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 2.6e-30 136.3 199 43.7
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 4.5e-30 135.6 192 44.8
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 2.2e-29 133.3 201 45.3
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 6.5e-29 131.7 203 41.9
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 8.4e-29 131.3 197 43.1
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 8.4e-29 131.3 203 42.4
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 1.4e-28 130.6 214 40.2
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 2.5e-28 129.8 203 41.4
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 9.3e-28 127.9 227 39.6
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 4.6e-27 125.6 200 42.0
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 2.3e-26 123.2 200 41.0
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 3.0e-26 122.9 213 36.6
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 4.3e-25 119.0 219 39.3
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.6e-24 117.1 159 43.4
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 2.8e-24 116.3 109 52.3
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 2.4e-23 113.2 219 38.4
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 2.4e-23 113.2 219 38.4
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 1.4e-20 104.0 101 55.4
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 9.4e-20 101.3 196 38.3
CSS0005922 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 2.7e-19 99.8 144 41.0
FvH4_2g34701 Fragaria vesca HOM05D006157 ORTHO05D007826 1.3e-16 90.9 116 47.4
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 2.5e-12 76.6 235 28.1
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 5.5e-12 75.5 164 32.9
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 3.6e-11 72.8 164 33.5
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 1.4e-10 70.9 166 36.7
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 4.4e-09 65.9 153 33.3
SalBow8G4867 Salvia bowleyana HOM05D006157 ORTHO05D007826 2.8e-08 63.2 92 41.3
Os09g0460100 Oryza sativa ssp. japonica HOM05D006157 ORTHO05D007826 1.5e-06 57.4 217 24.0
Zm00001eb100900 Zea mays HOM05D006157 ORTHO05D007826 4.5e-06 55.8 229 21.4


User provided reference genes

Program Settings