Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 1.1e-195 686.4 327 100.0
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 1.8e-163 579.3 322 82.6
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 9.1e-163 577.0 326 80.4
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 2.0e-162 575.9 323 83.0
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 2.9e-161 572.0 322 81.4
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 1.1e-160 570.1 326 80.7
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 3.2e-160 568.5 323 81.4
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 1.0e-158 563.5 323 82.0
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 7.4e-157 557.4 320 79.7
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 1.1e-155 553.5 321 79.4
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 1.1e-155 553.5 326 78.5
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 3.1e-155 552.0 322 77.3
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 2.5e-152 542.3 326 75.8
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 5.5e-152 541.2 323 77.1
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 9.4e-152 540.4 322 77.0
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 2.7e-151 538.9 323 77.4
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 6.1e-151 537.7 322 77.0
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 1.0e-150 537.0 326 76.4
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.4e-150 536.6 322 75.5
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 1.4e-150 536.6 326 75.8
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 1.4e-150 536.6 326 75.2
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 1.1e-149 533.5 323 74.6
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.3e-148 530.0 326 74.8
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 1.1e-147 526.9 286 84.3
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 3.5e-146 521.9 326 73.9
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 1.7e-145 519.6 326 73.6
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.7e-145 519.6 325 73.8
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 2.2e-145 519.2 326 73.9
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 6.5e-145 517.7 326 73.3
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 1.1e-144 516.9 326 73.0
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 1.6e-143 513.1 326 73.3
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 1.4e-142 510.0 286 80.8
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 9.7e-141 503.8 326 72.1
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 7.0e-139 497.7 320 73.4
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 2.9e-137 492.3 326 71.2
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 2.5e-136 489.2 324 68.5
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 3.6e-135 485.3 325 70.5
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 4.7e-135 485.0 326 70.2
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 6.1e-135 484.6 326 69.9
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 8.0e-135 484.2 323 69.7
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 1.0e-134 483.8 325 69.8
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 1.0e-134 483.8 319 69.6
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 1.0e-134 483.8 320 69.1
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 2.3e-134 482.6 326 70.9
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 4.0e-134 481.9 333 70.9
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 5.2e-134 481.5 322 70.2
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 5.2e-134 481.5 324 70.7
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 6.8e-134 481.1 322 71.1
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 8.8e-134 480.7 325 70.2
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 8.8e-134 480.7 320 68.4
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 1.5e-133 479.9 324 71.6
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 5.7e-133 478.0 321 70.4
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 1.3e-132 476.9 326 69.9
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 3.7e-132 475.3 326 69.6
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 4.8e-132 474.9 321 69.5
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 6.3e-132 474.6 326 67.5
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.4e-131 473.4 324 69.4
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.8e-131 473.0 324 69.1
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 1.8e-131 473.0 326 68.1
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 3.1e-131 472.2 286 75.5
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 3.1e-131 472.2 324 69.1
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 4.1e-131 471.9 326 68.7
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 7.0e-131 471.1 325 68.6
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 9.1e-131 470.7 326 68.1
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 2.7e-130 469.2 321 68.8
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 3.5e-130 468.8 316 70.3
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 4.5e-130 468.4 326 67.5
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 7.7e-130 467.6 326 66.6
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 7.7e-130 467.6 326 66.9
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 1.3e-129 466.8 326 67.5
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 1.3e-129 466.8 322 67.4
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 2.3e-129 466.1 325 68.6
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 1.9e-128 463.0 366 61.7
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 3.3e-128 462.2 322 68.0
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 4.2e-128 461.8 326 66.0
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 5.5e-128 461.5 325 66.5
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 1.2e-127 460.3 322 66.5
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 2.1e-127 459.5 322 66.8
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 2.8e-127 459.1 326 67.5
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 6.1e-127 458.0 327 67.3
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 8.0e-127 457.6 250 82.4
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 1.0e-126 457.2 326 68.1
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 1.0e-126 457.2 326 65.3
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 1.1e-123 447.2 322 65.5
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 1.8e-123 446.4 320 64.1
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.4e-123 446.0 320 64.4
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 3.2e-123 445.7 320 64.1
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 7.0e-123 444.5 320 64.4
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 1.6e-122 443.4 324 62.7
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 2.7e-122 442.6 329 64.1
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 2.3e-121 439.5 332 63.0
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 3.9e-121 438.7 260 79.2
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 6.6e-121 438.0 326 63.8
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 4.7e-119 431.8 320 62.2
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 8.0e-119 431.0 235 83.0
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 1.0e-113 414.1 263 78.3
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 2.3e-113 412.9 246 80.9
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 2.0e-109 399.8 317 59.6
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 5.8e-109 398.3 311 61.7
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 4.0e-102 375.6 326 56.1
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 3.0e-97 359.4 320 53.1
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 3.3e-96 355.9 321 52.6
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 3.3e-96 355.9 263 66.2
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 4.9e-92 342.0 279 62.7
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 3.2e-91 339.3 228 70.6
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 1.3e-89 334.0 374 44.1
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 4.2e-83 312.4 249 62.2
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 4.8e-79 298.9 247 59.5
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 3.8e-68 262.7 328 38.1
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 3.9e-65 252.7 247 48.6
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 2.0e-61 240.4 191 61.8
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 2.7e-58 229.9 189 57.1
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 3.3e-56 223.0 138 75.4
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 7.2e-51 205.3 124 72.6
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 5.1e-49 199.1 130 70.8
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 6.1e-42 175.6 94 84.0
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 7.2e-27 125.6 150 44.7
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 3.7e-23 113.2 113 51.3
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 4.7e-18 96.3 87 60.9
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 6.8e-17 92.4 85 50.6
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 4.9e-15 86.3 53 67.9
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 6.8e-09 65.9 55 63.6
Psat3g177400 Pisum sativum HOM05D002893 ORTHO05D003387 1.1e-06 58.5 105 36.2
FAN17G2054 Fragaria x ananassa HOM05D002893 ORTHO05D003387 2.4e-06 57.4 108 33.3
Actinidia30889 Actinidia chinensis HOM05D002893 ORTHO05D003387 4.1e-06 56.6 104 29.8
Nn4g22385 Nelumbo nucifera HOM05D002893 ORTHO05D003387 9.2e-06 55.5 106 33.0


User provided reference genes

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