Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0004500 Salix brachista HOM05D001027 ORTHO05D000844 1.6e-41 172.9 130 100.0
Sabra14G0001300 Salix brachista HOM05D001027 ORTHO05D000844 1.5e-39 166.4 128 99.2
Potri.014G004900 Populus trichocarpa HOM05D001027 ORTHO05D000844 1.5e-31 139.8 120 89.2
Potri.007G005000 Populus trichocarpa HOM05D001027 ORTHO05D000844 1.3e-24 116.7 115 87.8
Manes.13G111100 Manihot esculenta HOM05D001027 ORTHO05D000844 6.0e-17 91.3 119 78.2
Manes.12G115100 Manihot esculenta HOM05D001027 ORTHO05D000844 1.9e-15 86.3 120 75.8
Duzib264G0181 Durio zibethinus HOM05D001027 ORTHO05D000844 4.4e-12 75.1 68 63.2
Cpa.g.sc6.10 Carica papaya HOM05D001027 ORTHO05D000844 8.4e-11 70.9 118 68.6
Thecc.01G073300 Theobroma cacao HOM05D001027 ORTHO05D000844 1.9e-10 69.7 68 61.8
Duzib147G1283 Durio zibethinus HOM05D001027 ORTHO05D000844 4.2e-10 68.6 67 61.2
MD15G1298000 Malus domestica HOM05D001027 ORTHO05D000844 4.2e-10 68.6 84 53.6
TAR628G1060 Trochodendron aralioides HOM05D001027 ORTHO05D000844 9.3e-10 67.4 73 54.8
RcHm_v2.0_Chr2g0108241 Rosa chinensis HOM05D001027 ORTHO05D000844 2.7e-09 65.9 72 55.6
TAR625G1229 Trochodendron aralioides HOM05D001027 ORTHO05D000844 3.5e-09 65.5 68 57.4
COL.COLO4_11583 Corchorus olitorius HOM05D001027 ORTHO05D000844 4.6e-09 65.1 68 57.4
Prupe.6G219800 Prunus persica HOM05D001027 ORTHO05D000844 4.6e-09 65.1 84 52.4
Sed0014323 Sechium edule HOM05D001027 ORTHO05D000844 6.0e-09 64.7 73 57.5
Gohir.A02G151200 Gossypium hirsutum HOM05D001027 ORTHO05D000844 7.8e-09 64.3 67 58.2
Gohir.D03G029100 Gossypium hirsutum HOM05D001027 ORTHO05D000844 7.8e-09 64.3 67 58.2
Rhsim10G0099200 Rhododendron simsii HOM05D001027 ORTHO05D000844 1.0e-08 63.9 72 50.0
Lalb_Chr15g0088961 Lupinus albus HOM05D001027 ORTHO05D000844 1.3e-08 63.5 69 50.7
MD02G1186900 Malus domestica HOM05D001027 ORTHO05D000844 1.3e-08 63.5 84 50.0
PGR102G1507 Punica granatum HOM05D001027 ORTHO05D000844 1.3e-08 63.5 73 49.3
Thecc.02G118200 Theobroma cacao HOM05D001027 ORTHO05D000844 3.0e-08 62.4 69 50.7
CsaV3_6G044170 Cucumis sativus L. HOM05D001027 ORTHO05D000844 3.9e-08 62.0 73 54.8
Glyma.01G194600 Glycine max HOM05D001027 ORTHO05D000844 3.9e-08 62.0 73 50.7
Glyma.11G047300 Glycine max HOM05D001027 ORTHO05D000844 3.9e-08 62.0 73 50.7
Gohir.A11G214400 Gossypium hirsutum HOM05D001027 ORTHO05D000844 3.9e-08 62.0 67 55.2
Gohir.D11G209000 Gossypium hirsutum HOM05D001027 ORTHO05D000844 3.9e-08 62.0 68 54.4
TAR376G0109 Trochodendron aralioides HOM05D001027 ORTHO05D000844 5.1e-08 61.6 73 50.7
CANSAT01G3285 Cannabis sativa HOM05D001027 ORTHO05D000844 6.6e-08 61.2 84 52.4
MELO3C007640.2 Cucumis melo HOM05D001027 ORTHO05D000844 6.6e-08 61.2 73 54.8
Dinv26937 Davidia involucrata HOM05D001027 ORTHO05D000844 6.6e-08 61.2 73 53.4
Gorai.007G224200 Gossypium raimondii HOM05D001027 ORTHO05D000844 6.6e-08 61.2 67 55.2
Phvul.002G010300 Phaseolus vulgaris HOM05D001027 ORTHO05D000844 6.6e-08 61.2 73 50.7
ClCG01G017630 Citrullus lanatus HOM05D001027 ORTHO05D000844 8.7e-08 60.8 74 52.7
Nn8g41043 Nelumbo nucifera HOM05D001027 ORTHO05D000844 1.1e-07 60.5 73 52.1
GSVIVG01004303001 Vitis vinifera HOM05D001027 ORTHO05D000844 1.1e-07 60.5 69 53.6
Manes.10G082400 Manihot esculenta HOM05D001027 ORTHO05D000844 1.5e-07 60.1 73 49.3
Duzib248G0855 Durio zibethinus HOM05D001027 ORTHO05D000844 1.9e-07 59.7 69 50.7
vmacro05413 Vaccinium macrocarpon HOM05D001027 ORTHO05D000844 1.9e-07 59.7 70 51.4
CSS0029061 Camellia sinensis var. sinensis HOM05D001027 ORTHO05D000844 2.5e-07 59.3 73 47.9
FvH4_1g17790 Fragaria vesca HOM05D001027 ORTHO05D000844 2.5e-07 59.3 72 51.4
FAN19G1449 Fragaria x ananassa HOM05D001027 ORTHO05D000844 2.5e-07 59.3 72 51.4
FAN23G2844 Fragaria x ananassa HOM05D001027 ORTHO05D000844 2.5e-07 59.3 72 51.4
FAN26G1448 Fragaria x ananassa HOM05D001027 ORTHO05D000844 2.5e-07 59.3 72 51.4
FAN28G0636 Fragaria x ananassa HOM05D001027 ORTHO05D000844 2.5e-07 59.3 72 51.4
Gohir.D02G203700 Gossypium hirsutum HOM05D001027 ORTHO05D000844 2.5e-07 59.3 69 47.8
Gorai.005G230800 Gossypium raimondii HOM05D001027 ORTHO05D000844 2.5e-07 59.3 69 47.8
Medtr5g015340 Medicago truncatula HOM05D001027 ORTHO05D000844 2.5e-07 59.3 86 47.7
QL06p039525 Quercus lobata HOM05D001027 ORTHO05D000844 2.5e-07 59.3 85 45.9
CSS0022401 Camellia sinensis var. sinensis HOM05D001027 ORTHO05D000844 3.3e-07 58.9 73 47.9
MBI18_g10585_MAGBIO Magnolia biondii HOM05D001027 ORTHO05D000844 3.3e-07 58.9 71 50.7
Actinidia34532 Actinidia chinensis HOM05D001027 ORTHO05D000844 4.3e-07 58.5 72 50.0
Gohir.A03G182000 Gossypium hirsutum HOM05D001027 ORTHO05D000844 5.6e-07 58.2 69 46.4
Aqoxy6G02593 Aquilegia oxysepala HOM05D001027 ORTHO05D000844 9.6e-07 57.4 72 48.6
CiPaw.02G001900 Carya illinoinensis HOM05D001027 ORTHO05D000844 9.6e-07 57.4 68 54.4
Lalb_Chr20g0120231 Lupinus albus HOM05D001027 ORTHO05D000844 1.3e-06 57.0 73 43.8
Phvul.006G123700 Phaseolus vulgaris HOM05D001027 ORTHO05D000844 1.3e-06 57.0 73 43.8
Psat2g171680 Pisum sativum HOM05D001027 ORTHO05D000844 1.3e-06 57.0 86 46.5
TPR.G36162 Trifolium pratense HOM05D001027 ORTHO05D000844 1.3e-06 57.0 68 51.5
VMungo0540G1626 Vigna mungo HOM05D001027 ORTHO05D000844 1.6e-06 56.6 73 43.8
Ca_24682_v3 Cicer arietinum L. HOM05D001027 ORTHO05D000844 2.1e-06 56.2 74 45.9
Duzib187G1596 Durio zibethinus HOM05D001027 ORTHO05D000844 2.1e-06 56.2 63 55.6
Os12g0613300 Oryza sativa ssp. japonica HOM05D001027 ORTHO05D000844 2.1e-06 56.2 72 48.6
Rhsim11G0152500 Rhododendron simsii HOM05D001027 ORTHO05D000844 2.1e-06 56.2 74 48.6
Manes.10G083455 Manihot esculenta HOM05D001027 ORTHO05D000844 2.8e-06 55.8 73 46.6
Sed0009800 Sechium edule HOM05D001027 ORTHO05D000844 2.8e-06 55.8 85 45.9
HPP92_017715 Vanilla planifolia HOM05D001027 ORTHO05D000844 2.8e-06 55.8 74 44.6
Actinidia11978 Actinidia chinensis HOM05D001027 ORTHO05D000844 3.6e-06 55.5 72 47.2
CSS0034494 Camellia sinensis var. sinensis HOM05D001027 ORTHO05D000844 3.6e-06 55.5 73 46.6
Glyma.09G029300 Glycine max HOM05D001027 ORTHO05D000844 3.6e-06 55.5 73 45.2
Lalb_Chr16g0378881 Lupinus albus HOM05D001027 ORTHO05D000844 3.6e-06 55.5 85 44.7
RhsimUnG0124200 Rhododendron simsii HOM05D001027 ORTHO05D000844 3.6e-06 55.5 74 47.3
CiPaw.01G004100 Carya illinoinensis HOM05D001027 ORTHO05D000844 4.8e-06 55.1 84 41.7
Nn1g04540 Nelumbo nucifera HOM05D001027 ORTHO05D000844 4.8e-06 55.1 73 46.6
GSVIVG01037816001 Vitis vinifera HOM05D001027 ORTHO05D000844 4.8e-06 55.1 71 49.3
arahy.Tifrunner.gnm1.ann1.1Y2NXV Arachis hypogaea HOM05D001027 ORTHO05D000844 6.2e-06 54.7 72 44.4
arahy.Tifrunner.gnm1.ann1.4L6GWX Arachis hypogaea HOM05D001027 ORTHO05D000844 6.2e-06 54.7 72 44.4
Hma1.2p1_0661F.1_g198170 Hydrangea macrophylla HOM05D001027 ORTHO05D000844 6.2e-06 54.7 69 47.8
Glyma.15G135100 Glycine max HOM05D001027 ORTHO05D000844 8.1e-06 54.3 73 43.8
TWI14G1140 Tripterygium wilfordii HOM05D001027 ORTHO05D000844 8.1e-06 54.3 76 46.1


User provided reference genes

Program Settings