Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0004400 Salix brachista HOM05D007087 ORTHO05D008968 5.0e-42 174.1 93 100.0
Potri.014G010000 Populus trichocarpa HOM05D007087 ORTHO05D008968 9.5e-33 143.3 80 96.2
Sabra14G0001400 Salix brachista HOM05D007087 ORTHO05D008968 1.2e-32 142.9 78 100.0
Cfa006833 Carpinus fangiana HOM05D007087 ORTHO05D008968 4.6e-27 124.4 73 84.9
Hma1.2p1_0080F.1_g042080 Hydrangea macrophylla HOM05D007087 ORTHO05D008968 4.6e-27 124.4 73 84.9
Aqoxy5G01405 Aquilegia oxysepala HOM05D007087 ORTHO05D008968 1.0e-26 123.2 73 84.9
ECA232G4432 Erigeron canadensis HOM05D007087 ORTHO05D008968 1.0e-26 123.2 71 85.9
HanXRQChr09g0262861 Helianthus annuus HOM05D007087 ORTHO05D008968 1.0e-26 123.2 71 85.9
Hund16615 Selenicereus undatus HOM05D007087 ORTHO05D008968 1.0e-26 123.2 71 87.3
Sc16g0000740 Simmondsia chinensis HOM05D007087 ORTHO05D008968 1.0e-26 123.2 71 87.3
TAR376G1208 Trochodendron aralioides HOM05D007087 ORTHO05D008968 1.0e-26 123.2 72 86.1
CSS0037594 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 1.3e-26 122.9 73 83.6
CSS0044951 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 1.3e-26 122.9 73 83.6
QL06p037367 Quercus lobata HOM05D007087 ORTHO05D008968 1.3e-26 122.9 73 83.6
AL4G12190 Arabidopsis lyrata HOM05D007087 ORTHO05D008968 1.7e-26 122.5 73 83.6
AT2G22640 Arabidopsis thaliana HOM05D007087 ORTHO05D008968 1.7e-26 122.5 73 83.6
EL10Ac6g13306 Beta vulgaris HOM05D007087 ORTHO05D008968 1.7e-26 122.5 71 85.9
BcaB06g27810 Brassica carinata HOM05D007087 ORTHO05D008968 1.7e-26 122.5 73 83.6
BcaC02g08628 Brassica carinata HOM05D007087 ORTHO05D008968 1.7e-26 122.5 73 83.6
A04p17120 Brassica napus HOM05D007087 ORTHO05D008968 1.7e-26 122.5 73 83.6
C04p51930 Brassica napus HOM05D007087 ORTHO05D008968 1.7e-26 122.5 73 83.6
BolC4t26765H Brassica oleracea HOM05D007087 ORTHO05D008968 1.7e-26 122.5 73 83.6
BraA04t17341Z Brassica rapa HOM05D007087 ORTHO05D008968 1.7e-26 122.5 73 83.6
Carub.0004s0180 Capsella rubella HOM05D007087 ORTHO05D008968 1.7e-26 122.5 73 83.6
Thhalv10000402m.g Eutrema salsugineum HOM05D007087 ORTHO05D008968 1.7e-26 122.5 73 83.6
AUR62005889 Chenopodium quinoa HOM05D007087 ORTHO05D008968 2.3e-26 122.1 71 85.9
COL.COLO4_11683 Corchorus olitorius HOM05D007087 ORTHO05D008968 3.0e-26 121.7 73 82.2
Dinv27003 Davidia involucrata HOM05D007087 ORTHO05D008968 3.0e-26 121.7 73 82.2
FvH4_1g19040 Fragaria vesca HOM05D007087 ORTHO05D008968 3.0e-26 121.7 71 84.5
FAN23G1122 Fragaria x ananassa HOM05D007087 ORTHO05D008968 3.0e-26 121.7 71 84.5
FAN26G0060 Fragaria x ananassa HOM05D007087 ORTHO05D008968 3.0e-26 121.7 71 84.5
FAN28G2302 Fragaria x ananassa HOM05D007087 ORTHO05D008968 3.0e-26 121.7 71 84.5
HanXRQChr11g0324431 Helianthus annuus HOM05D007087 ORTHO05D008968 3.0e-26 121.7 71 84.5
Oeu024989.2 Olea europaea HOM05D007087 ORTHO05D008968 3.0e-26 121.7 73 80.8
PGR102G1803 Punica granatum HOM05D007087 ORTHO05D008968 3.0e-26 121.7 73 82.2
RcHm_v2.0_Chr2g0110041 Rosa chinensis HOM05D007087 ORTHO05D008968 3.0e-26 121.7 71 84.5
Gohir.A11G208700 Gossypium hirsutum HOM05D007087 ORTHO05D008968 3.9e-26 121.3 73 82.2
Gohir.D11G214800 Gossypium hirsutum HOM05D007087 ORTHO05D008968 3.9e-26 121.3 73 82.2
Duzib264G0202 Durio zibethinus HOM05D007087 ORTHO05D008968 5.1e-26 120.9 71 84.5
Migut.L00449 Erythranthe guttata HOM05D007087 ORTHO05D008968 5.1e-26 120.9 71 83.1
Lsat_1_v5_gn_4_156341 Lactuca sativa HOM05D007087 ORTHO05D008968 5.1e-26 120.9 71 83.1
TAR625G1164 Trochodendron aralioides HOM05D007087 ORTHO05D008968 5.1e-26 120.9 72 84.7
CiPaw.08G145100 Carya illinoinensis HOM05D007087 ORTHO05D008968 6.6e-26 120.6 73 80.8
Gorai.007G230500 Gossypium raimondii HOM05D007087 ORTHO05D008968 8.6e-26 120.2 77 79.2
TWI77G0839 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 8.6e-26 120.2 73 80.8
MELO3C007697.2 Cucumis melo HOM05D007087 ORTHO05D008968 1.1e-25 119.8 73 80.8
MD01G1044400 Malus domestica HOM05D007087 ORTHO05D008968 1.1e-25 119.8 71 83.1
Prupe.6G209300 Prunus persica HOM05D007087 ORTHO05D008968 1.1e-25 119.8 71 83.1
Actinidia16395 Actinidia chinensis HOM05D007087 ORTHO05D008968 1.5e-25 119.4 73 80.8
arahy.Tifrunner.gnm1.ann1.6G1T2R Arachis hypogaea HOM05D007087 ORTHO05D008968 1.5e-25 119.4 73 80.8
arahy.Tifrunner.gnm1.ann1.NU08EI Arachis hypogaea HOM05D007087 ORTHO05D008968 1.5e-25 119.4 73 80.8
Manes.12G121500 Manihot esculenta HOM05D007087 ORTHO05D008968 1.5e-25 119.4 73 80.8
PSO017G4672 Papaver somniferum HOM05D007087 ORTHO05D008968 1.5e-25 119.4 72 83.3
PSO478G0358 Papaver somniferum HOM05D007087 ORTHO05D008968 1.5e-25 119.4 72 83.3
TPR.G37071 Trifolium pratense HOM05D007087 ORTHO05D008968 1.5e-25 119.4 73 80.8
Atru.chr3.1157 Acer truncatum HOM05D007087 ORTHO05D008968 1.9e-25 119.0 72 81.9
Atru.chr3.1173 Acer truncatum HOM05D007087 ORTHO05D008968 1.9e-25 119.0 72 81.9
CiPaw.07G042900 Carya illinoinensis HOM05D007087 ORTHO05D008968 1.9e-25 119.0 73 82.2
Ca_13466_v3 Cicer arietinum L. HOM05D007087 ORTHO05D008968 1.9e-25 119.0 73 80.8
Ciclev10027006m.g Citrus clementina HOM05D007087 ORTHO05D008968 1.9e-25 119.0 73 80.8
Duzib147G0219 Durio zibethinus HOM05D007087 ORTHO05D008968 1.9e-25 119.0 71 83.1
Glyma.01G020200 Glycine max HOM05D007087 ORTHO05D008968 1.9e-25 119.0 73 80.8
Lj2g0010143 Lotus japonicus HOM05D007087 ORTHO05D008968 1.9e-25 119.0 73 80.8
Medtr5g030935 Medicago truncatula HOM05D007087 ORTHO05D008968 1.9e-25 119.0 73 80.8
Phvul.002G143500 Phaseolus vulgaris HOM05D007087 ORTHO05D008968 1.9e-25 119.0 73 80.8
Psat2g134040 Pisum sativum HOM05D007087 ORTHO05D008968 1.9e-25 119.0 73 80.8
Thecc.01G084300 Theobroma cacao HOM05D007087 ORTHO05D008968 2.5e-25 118.6 73 80.8
THA.LOC104807661 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 3.3e-25 118.2 71 81.7
TWI53G1267 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 3.3e-25 118.2 73 80.8
vmacro18037 Vaccinium macrocarpon HOM05D007087 ORTHO05D008968 3.3e-25 118.2 73 79.5
Eucgr.I00598 Eucalyptus grandis HOM05D007087 ORTHO05D008968 5.6e-25 117.5 73 79.5
Eucgr.I00599 Eucalyptus grandis HOM05D007087 ORTHO05D008968 5.6e-25 117.5 73 79.5
THA.LOC104824923 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 5.6e-25 117.5 73 78.1
Glyma.09G202200 Glycine max HOM05D007087 ORTHO05D008968 7.3e-25 117.1 73 79.5
MBI16_g36494_MAGBIO Magnolia biondii HOM05D007087 ORTHO05D008968 7.3e-25 117.1 72 79.2
Actinidia22784 Actinidia chinensis HOM05D007087 ORTHO05D008968 1.6e-24 115.9 73 78.1
Lalb_Chr05g0216201 Lupinus albus HOM05D007087 ORTHO05D008968 2.1e-24 115.5 73 78.1
Lalb_Chr09g0325791 Lupinus albus HOM05D007087 ORTHO05D008968 6.2e-24 114.0 73 78.1
Cpa.g.sc129.16 Carica papaya HOM05D007087 ORTHO05D008968 8.1e-24 113.6 73 76.7
CDE01G0651 Ceratophyllum demersum HOM05D007087 ORTHO05D008968 4.0e-23 111.3 73 75.3
Zm00001eb259430 Zea mays HOM05D007087 ORTHO05D008968 5.2e-23 110.9 71 76.1
A09p57350 Brassica napus HOM05D007087 ORTHO05D008968 1.3e-21 106.3 73 75.3
BraA09t41128Z Brassica rapa HOM05D007087 ORTHO05D008968 1.3e-21 106.3 73 75.3
CAN.G11.24 Capsicum annuum HOM05D007087 ORTHO05D008968 1.7e-21 105.9 71 73.2
Os02g0829900 Oryza sativa ssp. japonica HOM05D007087 ORTHO05D008968 6.4e-21 104.0 83 65.1
CsaV3_6G044750 Cucumis sativus L. HOM05D007087 ORTHO05D008968 1.4e-20 102.8 60 81.7
Sp4g01675 Schrenkiella parvula HOM05D007087 ORTHO05D008968 1.4e-20 102.8 60 83.3
ATR0800G005 Amborella trichopoda HOM05D007087 ORTHO05D008968 7.1e-20 100.5 66 77.3
Dinv36975 Davidia involucrata HOM05D007087 ORTHO05D008968 7.1e-20 100.5 61 80.3
Solyc03g043720.4 Solanum lycopersicum HOM05D007087 ORTHO05D008968 3.5e-19 98.2 71 69.0
Sopen03g007570 Solanum pennellii HOM05D007087 ORTHO05D008968 3.5e-19 98.2 71 69.0
PGSC0003DMG400016688 Solanum tuberosum HOM05D007087 ORTHO05D008968 3.5e-19 98.2 71 69.0
Cc07_g07910 Coffea canephora HOM05D007087 ORTHO05D008968 4.6e-19 97.8 72 68.1
Peaxi162Scf00118g00061 Petunia axillaris HOM05D007087 ORTHO05D008968 6.0e-19 97.4 71 69.0
ClCG01G018190 Citrullus lanatus HOM05D007087 ORTHO05D008968 1.0e-18 96.7 61 78.7
COL.COLO4_02760 Corchorus olitorius HOM05D007087 ORTHO05D008968 1.3e-18 96.3 71 71.8
Nitab4.5_0000465g0110 Nicotiana tabacum HOM05D007087 ORTHO05D008968 3.9e-18 94.7 71 66.2
BcaB08g35111 Brassica carinata HOM05D007087 ORTHO05D008968 1.5e-17 92.8 80 62.5
Sed0015245 Sechium edule HOM05D007087 ORTHO05D008968 3.3e-17 91.7 73 65.8
Pp3c8_2740 Physcomitrium patens HOM05D007087 ORTHO05D008968 1.1e-15 86.7 64 65.6
Mapoly0132s0041 Marchantia polymorpha HOM05D007087 ORTHO05D008968 1.8e-15 85.9 66 63.6
AagrBONN_evm.TU.Sc2ySwM_344.2813 Anthoceros agrestis HOM05D007087 ORTHO05D008968 2.0e-14 82.4 70 55.7
SMO144G0170 Selaginella moellendorffii HOM05D007087 ORTHO05D008968 3.4e-14 81.6 66 59.1
FAN19G2569 Fragaria x ananassa HOM05D007087 ORTHO05D008968 8.4e-13 77.0 48 81.2
Nitab4.5_0008656g0010 Nicotiana tabacum HOM05D007087 ORTHO05D008968 5.1e-10 67.8 71 53.5
Aa31LG7G14170 Aethionema arabicum HOM05D007087 ORTHO05D008968 5.6e-09 64.3 32 87.5
Nn5g29785 Nelumbo nucifera HOM05D007087 ORTHO05D008968 5.6e-09 64.3 32 87.5
unitig_32.g10648 Utricularia gibba HOM05D007087 ORTHO05D008968 8.1e-08 60.5 35 74.3
Actinidia36375 Actinidia chinensis HOM05D007087 ORTHO05D008968 1.1e-07 60.1 32 81.2
SEGI_40703 Sequoiadendron giganteum HOM05D007087 ORTHO05D008968 3.1e-07 58.5 64 39.1


User provided reference genes

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