Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 9.8e-52 206.5 100 100.0
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 6.6e-24 114.0 100 59.0
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 3.6e-22 108.2 99 57.6
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 4.8e-22 107.8 99 56.6
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 1.1e-21 106.7 98 57.1
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 1.1e-21 106.7 100 56.0
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.4e-21 106.3 101 54.5
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 1.8e-21 105.9 118 50.8
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 2.4e-21 105.5 100 55.0
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.1e-21 105.1 98 56.1
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 3.1e-21 105.1 99 55.6
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 4.0e-21 104.8 99 55.6
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 9.0e-21 103.6 95 57.9
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 9.0e-21 103.6 98 54.1
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-20 103.2 98 55.1
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-20 103.2 98 55.1
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 1.2e-20 103.2 120 47.5
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 1.5e-20 102.8 100 53.0
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 2.0e-20 102.4 98 54.1
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.0e-20 102.4 85 61.2
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 2.6e-20 102.1 98 54.1
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.6e-20 102.1 96 55.2
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 2.6e-20 102.1 98 54.1
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 2.6e-20 102.1 99 53.5
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 3.4e-20 101.7 99 53.5
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 5.8e-20 100.9 113 47.8
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 7.6e-20 100.5 94 54.3
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 7.6e-20 100.5 100 53.0
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 9.9e-20 100.1 98 54.1
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 9.9e-20 100.1 96 54.2
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 1.7e-19 99.4 94 56.4
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 2.2e-19 99.0 100 51.0
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 2.9e-19 98.6 97 54.6
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 3.8e-19 98.2 95 55.8
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 3.8e-19 98.2 97 54.6
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 3.8e-19 98.2 101 51.5
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 3.8e-19 98.2 90 58.9
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 3.8e-19 98.2 99 51.5
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 4.9e-19 97.8 101 51.5
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 4.9e-19 97.8 101 51.5
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 6.4e-19 97.4 96 55.2
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.4e-19 97.4 110 47.3
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 6.4e-19 97.4 98 53.1
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 6.4e-19 97.4 96 52.1
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.4e-19 97.1 96 53.1
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 8.4e-19 97.1 98 51.0
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 1.1e-18 96.7 98 52.0
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 1.1e-18 96.7 96 53.1
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 1.1e-18 96.7 98 52.0
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 1.1e-18 96.7 96 52.1
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 1.4e-18 96.3 93 50.5
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 1.4e-18 96.3 98 51.0
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 1.4e-18 96.3 96 53.1
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 1.9e-18 95.9 97 53.6
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 3.2e-18 95.1 93 49.5
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 4.2e-18 94.7 95 51.6
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 5.4e-18 94.4 98 51.0
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 9.3e-18 93.6 97 49.5
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 1.2e-17 93.2 100 51.0
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 1.6e-17 92.8 105 46.7
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.6e-17 92.8 78 60.3
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 1.6e-17 92.8 92 52.2
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 1.6e-17 92.8 95 52.6
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 3.5e-17 91.7 98 51.0
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 4.6e-17 91.3 100 52.0
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 4.6e-17 91.3 94 50.0
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 7.9e-17 90.5 90 53.3
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 2.3e-16 89.0 100 51.0
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 2.3e-16 89.0 103 47.6
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 3.9e-16 88.2 99 48.5
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 3.9e-16 88.2 113 46.0
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 6.7e-16 87.4 113 46.0
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.7e-16 87.4 98 49.0
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 6.7e-16 87.4 97 47.4
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 8.7e-16 87.0 97 47.4
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 1.5e-15 86.3 97 48.5
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 1.5e-15 86.3 100 50.0
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 1.5e-15 86.3 100 46.0
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 1.5e-15 86.3 91 50.5
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 1.9e-15 85.9 99 50.5
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 1.9e-15 85.9 100 50.0
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 1.9e-15 85.9 101 49.5
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 1.9e-15 85.9 108 44.4
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 1.9e-15 85.9 99 50.5
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 5.6e-15 84.3 97 46.4
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.6e-14 82.8 98 48.0
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 2.8e-14 82.0 97 44.3
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 4.8e-14 81.3 115 40.9
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 4.8e-14 81.3 101 47.5
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 4.0e-13 78.2 102 46.1
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.6e-12 73.9 77 51.9
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 1.0e-11 73.6 87 44.8
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 2.9e-11 72.0 88 44.3
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 4.9e-11 71.2 99 40.4
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.5e-11 70.9 82 45.1
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 6.5e-11 70.9 95 40.0
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 1.9e-10 69.3 68 57.4
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-09 66.6 85 45.9
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 6.7e-08 60.8 81 46.9
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 8.7e-08 60.5 95 34.7


User provided reference genes

Program Settings