Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0113800 Salix brachista HOM05D007014 ORTHO05D008894 3.7e-85 318.2 158 100.0
Potri.013G134102 Populus trichocarpa HOM05D007014 ORTHO05D008894 1.9e-78 295.8 158 93.0
Potri.013G134000 Populus trichocarpa HOM05D007014 ORTHO05D008894 9.7e-78 293.5 158 92.4
Haze_13147 Corylus avellana HOM05D007014 ORTHO05D008894 5.5e-65 251.1 158 75.9
Cfa014594 Carpinus fangiana HOM05D007014 ORTHO05D008894 7.2e-65 250.8 158 75.9
CAN.G486.11 Capsicum annuum HOM05D007014 ORTHO05D008894 2.7e-64 248.8 158 75.9
Nitab4.5_0003022g0100 Nicotiana tabacum HOM05D007014 ORTHO05D008894 2.7e-64 248.8 154 77.9
Oeu029922.1 Olea europaea HOM05D007014 ORTHO05D008894 2.7e-64 248.8 153 77.1
Rhsim04G0068000 Rhododendron simsii HOM05D007014 ORTHO05D008894 4.7e-64 248.1 153 76.5
vmacro09278 Vaccinium macrocarpon HOM05D007014 ORTHO05D008894 1.4e-63 246.5 158 74.1
Dinv02170 Davidia involucrata HOM05D007014 ORTHO05D008894 2.3e-63 245.7 158 74.1
Manes.12G090900 Manihot esculenta HOM05D007014 ORTHO05D008894 2.3e-63 245.7 154 76.6
Peaxi162Scf02133g00022 Petunia axillaris HOM05D007014 ORTHO05D008894 3.0e-63 245.4 153 77.1
PGSC0003DMG400007866 Solanum tuberosum HOM05D007014 ORTHO05D008894 3.9e-63 245.0 153 77.1
GSVIVG01030373001 Vitis vinifera HOM05D007014 ORTHO05D008894 1.1e-62 243.4 155 77.4
RcHm_v2.0_Chr6g0277731 Rosa chinensis HOM05D007014 ORTHO05D008894 2.0e-62 242.7 153 77.1
PGSC0003DMG400007868 Solanum tuberosum HOM05D007014 ORTHO05D008894 2.0e-62 242.7 153 76.5
QL08p038417 Quercus lobata HOM05D007014 ORTHO05D008894 3.3e-62 241.9 153 75.8
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla HOM05D007014 ORTHO05D008894 5.7e-62 241.1 154 75.3
ClCG02G017580 Citrullus lanatus HOM05D007014 ORTHO05D008894 7.4e-62 240.7 148 77.0
Prupe.3G155400 Prunus persica HOM05D007014 ORTHO05D008894 1.3e-61 240.0 156 74.4
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 1.7e-61 239.6 148 77.0
Nn1g06593 Nelumbo nucifera HOM05D007014 ORTHO05D008894 4.8e-61 238.0 153 73.2
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 8.2e-61 237.3 154 72.7
Thecc.02G177900 Theobroma cacao HOM05D007014 ORTHO05D008894 8.2e-61 237.3 153 77.1
MSTRG.12316 Avicennia marina HOM05D007014 ORTHO05D008894 1.1e-60 236.9 153 74.5
SalBow1G7232 Salvia bowleyana HOM05D007014 ORTHO05D008894 2.4e-60 235.7 157 72.6
Sed0017748 Sechium edule HOM05D007014 ORTHO05D008894 3.1e-60 235.3 153 74.5
Cc05_g06870 Coffea canephora HOM05D007014 ORTHO05D008894 4.1e-60 235.0 154 74.0
MD09G1249800 Malus domestica HOM05D007014 ORTHO05D008894 4.1e-60 235.0 158 74.7
COL.COLO4_07554 Corchorus olitorius HOM05D007014 ORTHO05D008894 5.3e-60 234.6 149 77.2
Sopen12g005310 Solanum pennellii HOM05D007014 ORTHO05D008894 7.0e-60 234.2 153 75.2
TAR629G1268 Trochodendron aralioides HOM05D007014 ORTHO05D008894 1.2e-59 233.4 158 71.5
Ciclev10022606m.g Citrus clementina HOM05D007014 ORTHO05D008894 1.6e-59 233.0 151 72.8
Carub.0001s0276 Capsella rubella HOM05D007014 ORTHO05D008894 2.0e-59 232.6 149 73.2
Solyc12g010680.3 Solanum lycopersicum HOM05D007014 ORTHO05D008894 2.0e-59 232.6 153 74.5
FAN27G2134 Fragaria x ananassa HOM05D007014 ORTHO05D008894 2.6e-59 232.3 154 75.3
AL1G13150 Arabidopsis lyrata HOM05D007014 ORTHO05D008894 3.5e-59 231.9 149 73.8
AT1G03650 Arabidopsis thaliana HOM05D007014 ORTHO05D008894 3.5e-59 231.9 149 73.2
FvH4_2g15130 Fragaria vesca HOM05D007014 ORTHO05D008894 3.5e-59 231.9 154 74.7
CANSAT78G1474 Cannabis sativa HOM05D007014 ORTHO05D008894 5.9e-59 231.1 148 74.3
TWI36G0686 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 7.7e-59 230.7 153 71.9
Thhalv10008981m.g Eutrema salsugineum HOM05D007014 ORTHO05D008894 1.0e-58 230.3 149 73.2
HanXRQChr17g0553541 Helianthus annuus HOM05D007014 ORTHO05D008894 1.0e-58 230.3 157 68.2
Gohir.D13G066000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 1.3e-58 229.9 154 74.7
Gorai.013G075300 Gossypium raimondii HOM05D007014 ORTHO05D008894 1.3e-58 229.9 154 74.7
CARHR002980 Cardamine hirsuta HOM05D007014 ORTHO05D008894 1.7e-58 229.6 149 73.2
Nitab4.5_0002575g0020 Nicotiana tabacum HOM05D007014 ORTHO05D008894 2.2e-58 229.2 171 67.8
Sp1g02550 Schrenkiella parvula HOM05D007014 ORTHO05D008894 2.2e-58 229.2 149 71.8
CSS0024097 Camellia sinensis var. sinensis HOM05D007014 ORTHO05D008894 2.9e-58 228.8 155 74.2
Duzib052G1001 Durio zibethinus HOM05D007014 ORTHO05D008894 5.0e-58 228.0 156 73.7
Ciclev10022631m.g Citrus clementina HOM05D007014 ORTHO05D008894 8.5e-58 227.3 151 70.9
FAN15G2141 Fragaria x ananassa HOM05D007014 ORTHO05D008894 8.5e-58 227.3 152 74.3
BcaC07g42241 Brassica carinata HOM05D007014 ORTHO05D008894 1.1e-57 226.9 149 72.5
Gohir.A13G056000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 7.2e-57 224.2 154 72.1
Sc21g0002660 Simmondsia chinensis HOM05D007014 ORTHO05D008894 7.2e-57 224.2 158 69.0
PSO210G2618 Papaver somniferum HOM05D007014 ORTHO05D008894 9.4e-57 223.8 153 69.9
SGA_v2.0_scaffold307G48064 Striga asiatica HOM05D007014 ORTHO05D008894 9.4e-57 223.8 156 70.5
Aa31LG1G20970 Aethionema arabicum HOM05D007014 ORTHO05D008894 1.2e-56 223.4 148 71.6
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 2.1e-56 222.6 160 68.1
Aqoxy4G01010 Aquilegia oxysepala HOM05D007014 ORTHO05D008894 4.7e-56 221.5 153 66.7
THA.LOC104801176 Tarenaya hassleriana HOM05D007014 ORTHO05D008894 4.7e-56 221.5 148 70.3
Cpa.g.sc34.144 Carica papaya HOM05D007014 ORTHO05D008894 6.1e-56 221.1 146 74.0
Ca_28202_v3 Cicer arietinum L. HOM05D007014 ORTHO05D008894 6.1e-56 221.1 156 71.2
BcaC07g42236 Brassica carinata HOM05D007014 ORTHO05D008894 1.0e-55 220.3 149 70.5
PSO832G4125 Papaver somniferum HOM05D007014 ORTHO05D008894 1.0e-55 220.3 153 69.3
TPR.G21768 Trifolium pratense HOM05D007014 ORTHO05D008894 1.4e-55 219.9 153 73.9
Glyma.12G111800 Glycine max HOM05D007014 ORTHO05D008894 1.8e-55 219.5 153 73.9
unitig_21.g20401 Utricularia gibba HOM05D007014 ORTHO05D008894 1.8e-55 219.5 157 65.6
Lj3g0024821 Lotus japonicus HOM05D007014 ORTHO05D008894 2.3e-55 219.2 153 73.2
MBI17_g43194_MAGBIO Magnolia biondii HOM05D007014 ORTHO05D008894 2.0e-54 216.1 153 70.6
Medtr4g046047 Medicago truncatula HOM05D007014 ORTHO05D008894 2.6e-54 215.7 153 71.9
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea HOM05D007014 ORTHO05D008894 4.4e-54 214.9 154 67.5
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea HOM05D007014 ORTHO05D008894 4.4e-54 214.9 154 67.5
BcaC07g42250 Brassica carinata HOM05D007014 ORTHO05D008894 5.7e-54 214.5 153 67.3
C08p52830 Brassica napus HOM05D007014 ORTHO05D008894 5.7e-54 214.5 153 67.3
Psat7g157760 Pisum sativum HOM05D007014 ORTHO05D008894 7.5e-54 214.2 153 71.9
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea HOM05D007014 ORTHO05D008894 9.7e-54 213.8 154 67.5
BolC8t52799H Brassica oleracea HOM05D007014 ORTHO05D008894 1.3e-53 213.4 150 70.0
BraA09t42163Z Brassica rapa HOM05D007014 ORTHO05D008894 1.3e-53 213.4 150 69.3
Phvul.011G117200 Phaseolus vulgaris HOM05D007014 ORTHO05D008894 1.3e-53 213.4 153 71.2
Migut.H01076 Erythranthe guttata HOM05D007014 ORTHO05D008894 1.7e-53 213.0 148 68.2
EL10Ac9g20747 Beta vulgaris HOM05D007014 ORTHO05D008894 3.7e-53 211.8 149 67.1
CDE02G4296 Ceratophyllum demersum HOM05D007014 ORTHO05D008894 1.1e-52 210.3 148 66.2
BcaC07g42259 Brassica carinata HOM05D007014 ORTHO05D008894 2.4e-52 209.1 153 67.3
CiPaw.03G175500 Carya illinoinensis HOM05D007014 ORTHO05D008894 9.1e-52 207.2 134 73.1
FAN24G2354 Fragaria x ananassa HOM05D007014 ORTHO05D008894 2.2e-50 202.6 153 67.3
Glyma.06G293600 Glycine max HOM05D007014 ORTHO05D008894 2.2e-50 202.6 153 68.0
Lsat_1_v5_gn_8_133041 Lactuca sativa HOM05D007014 ORTHO05D008894 2.5e-49 199.1 154 59.7
ATR0680G283 Amborella trichopoda HOM05D007014 ORTHO05D008894 2.1e-48 196.1 151 62.3
HPP92_002954 Vanilla planifolia HOM05D007014 ORTHO05D008894 1.0e-47 193.7 156 62.8
Zm00001eb044470 Zea mays HOM05D007014 ORTHO05D008894 1.8e-47 193.0 151 62.3
Zm00001eb044400 Zea mays HOM05D007014 ORTHO05D008894 4.0e-47 191.8 151 62.3
ECA233G3399 Erigeron canadensis HOM05D007880 ORTHO05D003386 6.8e-47 191.0 134 67.2
VMungo1127G0420 Vigna mungo HOM05D007014 ORTHO05D008894 1.5e-46 189.9 177 58.2
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea HOM05D007014 ORTHO05D008894 2.0e-46 189.5 134 68.7
TWI36G1550 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 1.1e-44 183.7 154 57.8
Os10g0500400 Oryza sativa ssp. japonica HOM05D007014 ORTHO05D008894 3.6e-40 168.7 164 52.4
Actinidia30478 Actinidia chinensis HOM05D007014 ORTHO05D008894 1.0e-39 167.2 98 82.7
Sabra11G0072100 Salix brachista HOM05D000036 ORTHO05D000095 1.1e-36 157.1 81 95.1
Sabra15G0066900 Salix brachista HOM05D000036 ORTHO05D000095 1.1e-36 157.1 81 95.1
Mapoly0101s0002 Marchantia polymorpha HOM05D007014 ORTHO05D008894 4.1e-36 155.2 152 54.6
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 4.5e-35 151.8 104 70.2
A09p68280 Brassica napus HOM05D001041 ORTHO05D000846 1.3e-34 150.2 103 69.9
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 1.5e-33 146.7 81 91.4
Lsat_1_v5_gn_8_132641 Lactuca sativa HOM05D007014 ORTHO05D008894 5.6e-33 144.8 93 74.2
Lalb_Chr01g0005301 Lupinus albus HOM05D007014 ORTHO05D008894 1.8e-31 139.8 88 77.3
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis HOM05D007014 ORTHO05D008894 4.0e-31 138.7 146 51.4
Ciclev10023600m.g Citrus clementina HOM05D007014 ORTHO05D008894 4.6e-27 125.2 76 76.3
QL12p004320 Quercus lobata HOM05D007014 ORTHO05D008894 1.1e-25 120.6 78 71.8
Hund01169 Selenicereus undatus HOM05D007014 ORTHO05D008894 4.3e-25 118.6 78 74.4
DCAR_013001 Daucus carota HOM05D007014 ORTHO05D008894 2.6e-22 109.4 86 66.3
AUR62037369 Chenopodium quinoa HOM05D007014 ORTHO05D008894 2.3e-18 96.3 67 68.7
MELO3C013609.2 Cucumis melo HOM05D007014 ORTHO05D008894 2.5e-17 92.8 65 66.2
PRCOL_00005877 Prasinoderma coloniale HOM05D007014 ORTHO05D008894 2.8e-16 89.4 97 49.5
SalBow1G7442 Salvia bowleyana HOM05D007014 ORTHO05D008894 3.2e-12 75.9 53 60.4
Pp3c2_27490 Physcomitrium patens HOM05D007014 ORTHO05D008894 6.6e-10 68.2 78 46.2
Os01g0610400 Oryza sativa ssp. japonica HOM05D004398 ORTHO05D005268 2.0e-06 56.6 124 29.0


User provided reference genes

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