Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0105500 Salix brachista HOM05D004197 ORTHO05D004975 5.1e-87 324.3 159 100.0
Potri.013G126200 Populus trichocarpa HOM05D004197 ORTHO05D004975 1.9e-44 183.0 169 60.4
TWI34G1638 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 1.2e-40 170.2 169 55.0
Hma1.2p1_0307F.1_g119895 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 2.0e-38 162.9 169 53.8
CDE02G1869 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 3.4e-38 162.2 168 53.0
TWI32G1250 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 4.4e-38 161.8 169 52.7
CSS0039414 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 2.9e-37 159.1 169 52.7
CSS0047181 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 2.9e-37 159.1 169 52.7
Rhsim03G0176800 Rhododendron simsii HOM05D004197 ORTHO05D004975 2.9e-37 159.1 168 52.4
CiPaw.11G096400 Carya illinoinensis HOM05D004197 ORTHO05D004975 4.9e-37 158.3 169 51.5
Duzib151G0052 Durio zibethinus HOM05D004197 ORTHO05D004975 4.9e-37 158.3 169 51.5
Gohir.A10G143100 Gossypium hirsutum HOM05D004197 ORTHO05D004975 6.4e-37 157.9 169 52.1
Gorai.011G136700 Gossypium raimondii HOM05D004197 ORTHO05D004975 6.4e-37 157.9 169 52.1
Gorai.012G053000 Gossypium raimondii HOM05D004197 ORTHO05D004975 6.4e-37 157.9 169 52.1
Duzib212G0574 Durio zibethinus HOM05D004197 ORTHO05D004975 1.1e-36 157.1 169 50.9
Thecc.04G166300 Theobroma cacao HOM05D004197 ORTHO05D004975 1.4e-36 156.8 169 50.9
Gohir.A05G367700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.9e-36 156.4 169 51.5
Gohir.D10G123800 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.4e-36 156.0 169 51.5
Atru.chr12.1293 Acer truncatum HOM05D004197 ORTHO05D004975 3.2e-36 155.6 169 51.5
Gohir.D04G047600 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.2e-36 155.6 169 51.5
PSO832G1844 Papaver somniferum HOM05D004197 ORTHO05D004975 4.1e-36 155.2 168 51.8
Dinv33200 Davidia involucrata HOM05D004197 ORTHO05D004975 5.4e-36 154.8 168 51.8
Eucgr.G02225 Eucalyptus grandis HOM05D004197 ORTHO05D004975 7.1e-36 154.5 169 50.3
Manes.06G021100 Manihot esculenta HOM05D004197 ORTHO05D004975 7.1e-36 154.5 169 52.7
AT3G59650 Arabidopsis thaliana HOM05D004197 ORTHO05D004975 1.2e-35 153.7 169 52.7
PGR142G4086 Punica granatum HOM05D004197 ORTHO05D004975 1.2e-35 153.7 169 50.9
Hund04335 Selenicereus undatus HOM05D004197 ORTHO05D004975 1.2e-35 153.7 169 50.9
GSVIVG01038138001 Vitis vinifera HOM05D004197 ORTHO05D004975 1.2e-35 153.7 169 51.5
AL5G41720 Arabidopsis lyrata HOM05D004197 ORTHO05D004975 1.6e-35 153.3 169 52.1
Carub.0005s2637 Capsella rubella HOM05D004197 ORTHO05D004975 1.6e-35 153.3 169 52.1
Atru.chr4.2919 Acer truncatum HOM05D004197 ORTHO05D004975 2.1e-35 152.9 169 50.9
Glyma.17G164900 Glycine max HOM05D004197 ORTHO05D004975 2.7e-35 152.5 169 49.7
Lalb_Chr04g0253841 Lupinus albus HOM05D004197 ORTHO05D004975 4.6e-35 151.8 169 50.3
PSO017G5565 Papaver somniferum HOM05D004197 ORTHO05D004975 4.6e-35 151.8 168 50.6
PSO675G0737 Papaver somniferum HOM05D004197 ORTHO05D004975 4.6e-35 151.8 168 50.6
Aa31LG10G13940 Aethionema arabicum HOM05D004197 ORTHO05D004975 7.8e-35 151.0 169 52.1
Ah.13g073520 Amaranthus hybridus HOM05D004197 ORTHO05D004975 7.8e-35 151.0 169 49.7
CARHR170020 Cardamine hirsuta HOM05D004197 ORTHO05D004975 1.0e-34 150.6 169 50.9
Cpa.g.sc10.180 Carica papaya HOM05D004197 ORTHO05D004975 1.0e-34 150.6 169 49.7
Cfa015042 Carpinus fangiana HOM05D004197 ORTHO05D004975 1.0e-34 150.6 169 49.7
AUR62023799 Chenopodium quinoa HOM05D004197 ORTHO05D004975 1.0e-34 150.6 169 49.1
VMungo0251G3068 Vigna mungo HOM05D004197 ORTHO05D004975 1.0e-34 150.6 169 49.7
Ca_23424_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 1.3e-34 150.2 169 49.7
Nn1g09691 Nelumbo nucifera HOM05D004197 ORTHO05D004975 1.3e-34 150.2 169 49.1
HPP92_007604 Vanilla planifolia HOM05D004197 ORTHO05D004975 1.3e-34 150.2 169 49.7
arahy.Tifrunner.gnm1.ann1.4JR04K Arachis hypogaea HOM05D004197 ORTHO05D004975 1.7e-34 149.8 169 50.3
arahy.Tifrunner.gnm1.ann1.5DCW4K Arachis hypogaea HOM05D004197 ORTHO05D004975 1.7e-34 149.8 169 50.3
arahy.Tifrunner.gnm1.ann1.E9H45Q Arachis hypogaea HOM05D004197 ORTHO05D004975 2.3e-34 149.4 168 50.0
QL10p055721 Quercus lobata HOM05D004197 ORTHO05D004975 2.3e-34 149.4 168 51.8
Phvul.003G238300 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 3.0e-34 149.1 169 49.1
Ciclev10022904m.g Citrus clementina HOM05D004197 ORTHO05D004975 3.9e-34 148.7 169 49.1
Oeu016610.1 Olea europaea HOM05D004197 ORTHO05D004975 3.9e-34 148.7 169 50.9
Psat1g223520 Pisum sativum HOM05D004197 ORTHO05D004975 3.9e-34 148.7 169 49.7
CiPaw.12G066300 Carya illinoinensis HOM05D004197 ORTHO05D004975 5.1e-34 148.3 169 47.9
Ca_10539_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 5.1e-34 148.3 169 48.5
PSO591G0183 Papaver somniferum HOM05D004197 ORTHO05D004975 5.1e-34 148.3 168 49.4
EL10Ac6g15364 Beta vulgaris HOM05D004197 ORTHO05D004975 1.1e-33 147.1 169 49.7
AUR62002389 Chenopodium quinoa HOM05D004197 ORTHO05D004975 1.1e-33 147.1 218 42.2
Glyma.05G102000 Glycine max HOM05D004197 ORTHO05D004975 1.1e-33 147.1 169 49.1
BcaC07g40496 Brassica carinata HOM05D004197 ORTHO05D004975 1.5e-33 146.7 169 50.3
A09p51920 Brassica napus HOM05D004197 ORTHO05D004975 1.5e-33 146.7 169 50.3
C08p34650 Brassica napus HOM05D004197 ORTHO05D004975 1.5e-33 146.7 169 50.3
BolC8t51067H Brassica oleracea HOM05D004197 ORTHO05D004975 1.5e-33 146.7 169 50.3
BraA09t40628Z Brassica rapa HOM05D004197 ORTHO05D004975 1.5e-33 146.7 169 50.3
Lj1g0017974 Lotus japonicus HOM05D004197 ORTHO05D004975 1.5e-33 146.7 169 48.5
Lalb_Chr10g0101191 Lupinus albus HOM05D004197 ORTHO05D004975 1.5e-33 146.7 169 48.5
BcaC08g44998 Brassica carinata HOM05D004197 ORTHO05D004975 1.9e-33 146.4 169 50.9
A07p24720 Brassica napus HOM05D000455 ORTHO05D000434 1.9e-33 146.4 169 50.9
C06p26290 Brassica napus HOM05D000455 ORTHO05D000434 1.9e-33 146.4 169 50.9
BolC6t37793H Brassica oleracea HOM05D004197 ORTHO05D004975 1.9e-33 146.4 169 50.9
BraA07t30117Z Brassica rapa HOM05D004197 ORTHO05D004975 1.9e-33 146.4 169 50.9
Sp5g03530 Schrenkiella parvula HOM05D004197 ORTHO05D004975 1.9e-33 146.4 169 50.3
Aqoxy7G00569 Aquilegia oxysepala HOM05D004197 ORTHO05D004975 2.5e-33 146.0 169 49.7
BcaB02g07455 Brassica carinata HOM05D004197 ORTHO05D004975 2.5e-33 146.0 169 50.3
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 2.5e-33 146.0 159 52.2
Thhalv10006316m.g Eutrema salsugineum HOM05D004197 ORTHO05D004975 2.5e-33 146.0 169 49.7
Medtr8g022770 Medicago truncatula HOM05D004197 ORTHO05D004975 2.5e-33 146.0 169 49.1
ATR0733G162 Amborella trichopoda HOM05D004197 ORTHO05D004975 3.3e-33 145.6 169 49.1
TPR.G16667 Trifolium pratense HOM05D004197 ORTHO05D004975 4.3e-33 145.2 168 48.8
HanXRQChr10g0286001 Helianthus annuus HOM05D004197 ORTHO05D004975 7.3e-33 144.4 169 49.1
Os03g0207250 Oryza sativa ssp. japonica HOM05D004197 ORTHO05D004975 7.3e-33 144.4 169 49.1
Sed0002539 Sechium edule HOM05D004197 ORTHO05D004975 9.5e-33 144.1 169 49.1
Cc02_g26370 Coffea canephora HOM05D004197 ORTHO05D004975 1.2e-32 143.7 169 48.5
Sp2g07880 Schrenkiella parvula HOM05D004197 ORTHO05D004975 1.2e-32 143.7 169 49.7
CANSAT80G2644 Cannabis sativa HOM05D004197 ORTHO05D004975 1.6e-32 143.3 169 48.5
CAN.G525.23 Capsicum annuum HOM05D004197 ORTHO05D004975 1.6e-32 143.3 169 49.1
Lsat_1_v5_gn_6_33001 Lactuca sativa HOM05D004197 ORTHO05D004975 1.6e-32 143.3 169 49.1
Psat4g166320 Pisum sativum HOM05D004197 ORTHO05D004975 1.6e-32 143.3 169 48.5
MSTRG.27564 Avicennia marina HOM05D004197 ORTHO05D004975 2.1e-32 142.9 169 47.9
ECA247G1539 Erigeron canadensis HOM05D004197 ORTHO05D004975 2.8e-32 142.5 169 49.1
Nitab4.5_0007872g0010 Nicotiana tabacum HOM05D004197 ORTHO05D004975 2.8e-32 142.5 169 47.9
ECA240G1468 Erigeron canadensis HOM05D004197 ORTHO05D004975 3.6e-32 142.1 169 48.5
Lsat_1_v5_gn_5_190681 Lactuca sativa HOM05D004197 ORTHO05D004975 6.2e-32 141.4 169 49.1
RcHm_v2.0_Chr1g0333831 Rosa chinensis HOM05D004197 ORTHO05D004975 6.2e-32 141.4 169 49.1
ClCG07G015230 Citrullus lanatus HOM05D004197 ORTHO05D004975 1.1e-31 140.6 169 49.1
MELO3C017759.2 Cucumis melo HOM05D004197 ORTHO05D004975 1.1e-31 140.6 169 48.5
FAN01G1948 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.1e-31 140.6 169 49.1
FAN06G1493 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.1e-31 140.6 169 49.1
Peaxi162Scf00196g00222 Petunia axillaris HOM05D004197 ORTHO05D004975 1.1e-31 140.6 169 47.9
Prupe.1G206900 Prunus persica HOM05D004197 ORTHO05D004975 1.1e-31 140.6 169 48.5
Nitab4.5_0000902g0310 Nicotiana tabacum HOM05D004197 ORTHO05D004975 1.4e-31 140.2 169 47.3
SalBow6G6028 Salvia bowleyana HOM05D004197 ORTHO05D004975 1.4e-31 140.2 167 49.1
THA.LOC104804007 Tarenaya hassleriana HOM05D004197 ORTHO05D004975 1.8e-31 139.8 169 47.3
EL10Ac3g06082 Beta vulgaris HOM05D004197 ORTHO05D004975 2.3e-31 139.4 169 46.2
FAN03G3355 Fragaria x ananassa HOM05D004197 ORTHO05D004975 2.3e-31 139.4 169 48.5
Migut.F01587 Erythranthe guttata HOM05D004197 ORTHO05D004975 3.1e-31 139.0 169 47.9
FvH4_7g06200 Fragaria vesca HOM05D004197 ORTHO05D004975 3.1e-31 139.0 169 48.5
MD08G1230600 Malus domestica HOM05D004197 ORTHO05D004975 3.1e-31 139.0 166 48.8
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 4.0e-31 138.7 159 49.7
unitig_899.g14470 Utricularia gibba HOM05D004197 ORTHO05D004975 4.0e-31 138.7 169 46.7
Solyc04g014390.3 Solanum lycopersicum HOM05D004197 ORTHO05D004975 5.2e-31 138.3 169 47.3
Sopen04g006520 Solanum pennellii HOM05D004197 ORTHO05D004975 5.2e-31 138.3 169 47.3
TAR362G0244 Trochodendron aralioides HOM05D000090 ORTHO05D001584 5.2e-31 138.3 160 49.4
Zm00001eb400580 Zea mays HOM05D004197 ORTHO05D004975 8.9e-31 137.5 169 47.3
Cc03_g14030 Coffea canephora HOM05D004197 ORTHO05D004975 1.2e-30 137.1 169 47.9
CsaV3_4G002820 Cucumis sativus L. HOM05D004197 ORTHO05D004975 1.5e-30 136.7 169 47.9
Phvul.010G124900 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 2.0e-30 136.3 160 48.1
PGSC0003DMG401023624 Solanum tuberosum HOM05D004197 ORTHO05D004975 7.6e-30 134.4 169 46.7
QL04p073242 Quercus lobata HOM05D004197 ORTHO05D004975 1.7e-29 133.3 168 46.4
TAR629G0957 Trochodendron aralioides HOM05D004197 ORTHO05D004975 3.7e-29 132.1 159 48.4
Gorai.004G083000 Gossypium raimondii HOM05D004197 ORTHO05D004975 8.4e-29 131.0 94 71.3
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 1.1e-28 130.6 93 72.0
Lj3g0000340 Lotus japonicus HOM05D004197 ORTHO05D004975 9.2e-28 127.5 169 44.4
Gohir.D08G078000 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.2e-27 127.1 95 68.4
BcaC02g10824 Brassica carinata HOM05D004197 ORTHO05D004975 2.1e-27 126.3 150 50.0
C04p24770 Brassica napus HOM05D004197 ORTHO05D004975 2.1e-27 126.3 150 50.0
BolC4t23981H Brassica oleracea HOM05D004197 ORTHO05D004975 2.1e-27 126.3 150 50.0
Atru.chr12.1301 Acer truncatum HOM05D004197 ORTHO05D004975 4.6e-27 125.2 91 69.2
Gohir.D10G075200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.0e-26 124.0 91 69.2
Atru.chr12.1273 Acer truncatum HOM05D004197 ORTHO05D004975 1.3e-26 123.6 93 67.7
Gorai.011G081000 Gossypium raimondii HOM05D004197 ORTHO05D004975 3.0e-26 122.5 91 69.2
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 5.1e-26 121.7 159 45.3
Gohir.D02G135200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 6.6e-26 121.3 91 68.1
Rhsim02G0084000 Rhododendron simsii HOM05D004197 ORTHO05D004975 8.6e-26 120.9 86 68.6
Gorai.005G151300 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.1e-25 120.6 91 67.0
HanXRQChr09g0264591 Helianthus annuus HOM05D004197 ORTHO05D004975 1.1e-25 120.6 94 68.1
arahy.Tifrunner.gnm1.ann1.XY21PC Arachis hypogaea HOM05D004197 ORTHO05D004975 3.3e-25 119.0 171 42.7
FAN24G1973 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.6e-24 116.7 159 45.9
QL04p093649 Quercus lobata HOM05D004197 ORTHO05D004975 2.1e-24 116.3 160 44.4
FvH4_2g13530 Fragaria vesca HOM05D004197 ORTHO05D004975 3.6e-24 115.5 161 46.0
Mapoly0027s0066 Marchantia polymorpha HOM05D004197 ORTHO05D004975 8.1e-24 114.4 169 43.8
TPR.G31074 Trifolium pratense HOM05D004197 ORTHO05D006502 1.1e-23 114.0 114 50.9
SHI24203 Sapria himalayana HOM05D004197 ORTHO05D004975 1.4e-23 113.6 163 42.3
SEGI_18755 Sequoiadendron giganteum HOM05D004197 ORTHO05D004975 2.4e-23 112.8 169 39.6
TAR493G0004 Trochodendron aralioides HOM05D004197 ORTHO05D004975 4.0e-23 112.1 156 44.9
arahy.Tifrunner.gnm1.ann1.60591L Arachis hypogaea HOM05D004197 ORTHO05D004975 5.2e-23 111.7 101 59.4
Zm00001eb007240 Zea mays HOM05D004197 ORTHO05D004975 8.9e-23 110.9 91 63.7
SalBow2G3321 Salvia bowleyana HOM05D004197 ORTHO05D004975 9.9e-22 107.5 86 66.3
DCAR_029674 Daucus carota HOM05D004197 ORTHO05D004975 1.7e-21 106.7 91 63.7
DCAR_009572 Daucus carota HOM05D004197 ORTHO05D004975 8.4e-21 104.4 91 62.6
CARHR099320 Cardamine hirsuta HOM05D004197 ORTHO05D004975 1.1e-20 104.0 83 65.1
Lsat_1_v5_gn_2_131080 Lactuca sativa HOM05D004197 ORTHO05D004975 1.6e-19 100.1 72 70.8
Peaxi162Scf00474g00723 Petunia axillaris HOM05D004197 ORTHO05D004975 2.7e-19 99.4 159 42.1
Gohir.D08G220700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 4.6e-19 98.6 77 67.5
Gorai.004G076200 Gossypium raimondii HOM05D004197 ORTHO05D004975 7.3e-17 91.3 159 36.5
Pp3c1_20100 Physcomitrium patens HOM05D004197 ORTHO05D004975 1.3e-16 90.5 169 35.5
Gohir.D04G172540 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.1e-15 87.4 60 75.0
Glyma.07G044001 Glycine max HOM05D004197 ORTHO05D004975 5.3e-15 85.1 82 57.3
Gorai.012G161800 Gossypium raimondii HOM05D004197 ORTHO05D004975 5.3e-15 85.1 60 73.3
unitig_736.g22525 Utricularia gibba HOM05D000398 ORTHO05D000551 9.9e-14 80.9 135 37.0
Hma1.2p1_0150F.1_g066800 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 3.2e-12 75.9 101 43.6
SMO347G0376 Selaginella moellendorffii HOM05D004197 ORTHO05D004975 5.4e-12 75.1 163 30.7
Gorai.004G234500 Gossypium raimondii HOM05D004197 ORTHO05D004975 9.3e-12 74.3 44 79.5
Lsat_1_v5_gn_6_23540 Lactuca sativa HOM05D004197 ORTHO05D004975 9.3e-12 74.3 69 60.9
vmacro16589 Vaccinium macrocarpon HOM05D004197 ORTHO05D004975 2.1e-11 73.2 101 42.6
COL.COLO4_08144 Corchorus olitorius HOM05D004197 ORTHO05D004975 1.0e-10 70.9 101 41.6
arahy.Tifrunner.gnm1.ann1.GGUP18 Arachis hypogaea HOM05D004197 ORTHO05D004975 5.1e-10 68.6 101 39.6
Cre06.g270650 Chlamydomonas reinhardtii HOM05D004197 ORTHO05D004975 3.6e-08 62.4 157 29.3
arahy.Tifrunner.gnm1.ann1.HJ8Q1I Arachis hypogaea HOM05D004197 ORTHO05D004975 5.3e-07 58.5 99 35.4


User provided reference genes

Program Settings