Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0104400 Salix brachista HOM05D003796 ORTHO05D004486 8.7e-79 297.0 157 100.0
Potri.013G125600 Populus trichocarpa HOM05D003796 ORTHO05D004486 2.2e-58 229.2 144 87.5
Atru.chr4.1395 Acer truncatum HOM05D003796 ORTHO05D004486 8.5e-26 120.9 119 56.3
Cpa.g.sc9.357 Carica papaya HOM05D003796 ORTHO05D004486 2.7e-24 115.9 78 70.5
MSTRG.22023 Avicennia marina HOM05D003796 ORTHO05D004486 6.1e-24 114.8 121 52.1
Gorai.009G351700 Gossypium raimondii HOM05D003796 ORTHO05D004486 1.8e-23 113.2 146 47.9
Gohir.D05G328000 Gossypium hirsutum HOM05D003796 ORTHO05D004486 2.3e-23 112.8 146 47.9
SGA_v2.0_scaffold25G10998 Striga asiatica HOM05D003796 ORTHO05D004486 6.8e-23 111.3 100 58.0
Oeu021569.1 Olea europaea HOM05D003796 ORTHO05D004486 8.8e-23 110.9 97 54.6
Gohir.A05G327600 Gossypium hirsutum HOM05D003796 ORTHO05D004486 1.2e-22 110.5 144 46.5
QL93p1902_0792 Quercus lobata HOM05D003796 ORTHO05D004486 2.0e-22 109.8 96 60.4
FAN22G2021 Fragaria x ananassa HOM05D003796 ORTHO05D004486 3.4e-22 109.0 78 70.5
Duzib268G1213 Durio zibethinus HOM05D003796 ORTHO05D004486 7.5e-22 107.8 77 66.2
Prupe.1G586900 Prunus persica HOM05D003796 ORTHO05D004486 1.3e-21 107.1 75 69.3
GSVIVG01038135001 Vitis vinifera HOM05D003796 ORTHO05D004486 1.3e-21 107.1 145 47.6
RcHm_v2.0_Chr4g0406061 Rosa chinensis HOM05D003796 ORTHO05D004486 1.7e-21 106.7 77 68.8
TAR362G0252 Trochodendron aralioides HOM05D003796 ORTHO05D004486 1.7e-21 106.7 113 50.4
Ciclev10021832m.g Citrus clementina HOM05D003796 ORTHO05D004486 2.2e-21 106.3 148 49.3
Migut.N03072 Erythranthe guttata HOM05D003796 ORTHO05D004486 3.7e-21 105.5 77 70.1
Hma1.2p1_0150F.1_g066730 Hydrangea macrophylla HOM05D003796 ORTHO05D004486 4.8e-21 105.1 77 64.9
MELO3C022427.2 Cucumis melo HOM05D003796 ORTHO05D004486 1.4e-20 103.6 77 62.3
CsaV3_6G007010 Cucumis sativus L. HOM05D003796 ORTHO05D004486 1.4e-20 103.6 77 63.6
Manes.11G130100 Manihot esculenta HOM05D003796 ORTHO05D004486 1.8e-20 103.2 128 46.9
Nn7g37675 Nelumbo nucifera HOM05D003796 ORTHO05D004486 1.8e-20 103.2 75 68.0
QL10p054554 Quercus lobata HOM05D003796 ORTHO05D004486 2.4e-20 102.8 96 57.3
QL10p054570 Quercus lobata HOM05D003796 ORTHO05D004486 2.4e-20 102.8 96 57.3
CAN.G1432.20 Capsicum annuum HOM05D003796 ORTHO05D004486 7.0e-20 101.3 92 57.6
FAN07G1083 Fragaria x ananassa HOM05D003796 ORTHO05D004486 1.6e-19 100.1 125 51.2
Actinidia28983 Actinidia chinensis HOM05D003796 ORTHO05D004486 2.0e-19 99.8 142 45.1
Lsat_1_v5_gn_3_110880 Lactuca sativa HOM05D003796 ORTHO05D004486 2.0e-19 99.8 135 45.2
TWI63G0811 Tripterygium wilfordii HOM05D003796 ORTHO05D004486 2.0e-19 99.8 92 55.4
Ah.13g073570 Amaranthus hybridus HOM05D003796 ORTHO05D004486 2.7e-19 99.4 89 53.9
EL10Ac3g06067 Beta vulgaris HOM05D003796 ORTHO05D004486 2.7e-19 99.4 114 46.5
Glyma.12G048900 Glycine max HOM05D003796 ORTHO05D004486 2.7e-19 99.4 78 57.7
PGR042G0542 Punica granatum HOM05D003796 ORTHO05D004486 2.7e-19 99.4 77 61.0
Solyc06g074890.1 Solanum lycopersicum HOM05D003796 ORTHO05D004486 2.7e-19 99.4 107 48.6
VMungo1127G1870 Vigna mungo HOM05D003796 ORTHO05D004486 3.5e-19 99.0 76 59.2
Sed0014142 Sechium edule HOM05D003796 ORTHO05D004486 4.5e-19 98.6 70 64.3
MBI08_g25562_MAGBIO Magnolia biondii HOM05D003796 ORTHO05D004486 5.9e-19 98.2 76 60.5
Sopen06g031300 Solanum pennellii HOM05D003796 ORTHO05D004486 5.9e-19 98.2 107 47.7
CDE04G0900 Ceratophyllum demersum HOM05D003796 ORTHO05D004486 7.7e-19 97.8 74 63.5
Nitab4.5_0007977g0020 Nicotiana tabacum HOM05D003796 ORTHO05D004486 7.7e-19 97.8 78 61.5
CiPaw.01G171300 Carya illinoinensis HOM05D003796 ORTHO05D004486 1.0e-18 97.4 147 46.9
FvH4_4g10500 Fragaria vesca HOM05D003796 ORTHO05D004486 1.0e-18 97.4 77 66.2
CANSAT35G0237 Cannabis sativa HOM05D003796 ORTHO05D004486 1.7e-18 96.7 145 43.4
MD08G1249800 Malus domestica HOM05D003796 ORTHO05D004486 1.7e-18 96.7 153 43.1
Phvul.011G051000 Phaseolus vulgaris HOM05D003796 ORTHO05D004486 2.3e-18 96.3 76 59.2
Lj3g0002298 Lotus japonicus HOM05D003796 ORTHO05D004486 2.9e-18 95.9 98 49.0
FAN12G1593 Fragaria x ananassa HOM05D003796 ORTHO05D004486 5.0e-18 95.1 76 65.8
Peaxi162Scf00568g00527 Petunia axillaris HOM05D003796 ORTHO05D004486 6.5e-18 94.7 92 56.5
PGSC0003DMG401007138 Solanum tuberosum HOM05D003796 ORTHO05D004486 6.5e-18 94.7 116 46.6
ECA240G0037 Erigeron canadensis HOM05D003796 ORTHO05D004486 1.1e-17 94.0 144 40.3
Cc06_g21590 Coffea canephora HOM05D003796 ORTHO05D004486 1.9e-17 93.2 148 43.2
FAN12G2909 Fragaria x ananassa HOM05D003796 ORTHO05D004486 1.9e-17 93.2 149 45.6
HanXRQChr13g0418501 Helianthus annuus HOM05D003796 ORTHO05D004486 1.6e-16 90.1 107 43.9
AUR62002376 Chenopodium quinoa HOM05D003796 ORTHO05D004486 2.1e-16 89.7 79 53.2
AUR62023807 Chenopodium quinoa HOM05D003796 ORTHO05D004486 2.8e-16 89.4 79 53.2
Lalb_Chr19g0138481 Lupinus albus HOM05D003796 ORTHO05D004486 2.8e-16 89.4 76 52.6
arahy.Tifrunner.gnm1.ann1.P7R60W Arachis hypogaea HOM05D003796 ORTHO05D004486 3.6e-16 89.0 104 44.2
TPR.G10226 Trifolium pratense HOM05D003796 ORTHO05D004486 1.8e-15 86.7 112 44.6
TWI63G1493 Tripterygium wilfordii HOM05D003796 ORTHO05D004486 2.3e-15 86.3 138 43.5
Os01g0894700 Oryza sativa ssp. japonica HOM05D003796 ORTHO05D004486 3.0e-15 85.9 95 51.6
Solyc06g074900.3 Solanum lycopersicum HOM05D003796 ORTHO05D004486 4.0e-15 85.5 144 41.0
PGSC0003DMG402007138 Solanum tuberosum HOM05D003796 ORTHO05D004486 4.0e-15 85.5 110 46.4
ATR0075G004 Amborella trichopoda HOM05D003796 ORTHO05D004486 1.2e-14 84.0 73 53.4
Medtr4g068280 Medicago truncatula HOM05D003796 ORTHO05D004486 1.2e-14 84.0 113 40.7
Sopen06g031310 Solanum pennellii HOM05D003796 ORTHO05D004486 1.2e-14 84.0 144 41.7
Ca_20812_v3 Cicer arietinum L. HOM05D003796 ORTHO05D004486 1.5e-14 83.6 117 41.0
Dinv33197 Davidia involucrata HOM05D003796 ORTHO05D004486 2.6e-14 82.8 149 42.3
Zm00001eb144880 Zea mays HOM05D003796 ORTHO05D004486 3.4e-14 82.4 77 54.5
Aqoxy2G01069 Aquilegia oxysepala HOM05D003796 ORTHO05D004486 4.4e-14 82.0 117 42.7
PSO832G1541 Papaver somniferum HOM05D003796 ORTHO05D004486 5.7e-14 81.6 143 38.5
arahy.Tifrunner.gnm1.ann1.I4880T Arachis hypogaea HOM05D003796 ORTHO05D004486 4.9e-13 78.6 91 45.1
CAN.G1001.53 Capsicum annuum HOM05D003796 ORTHO05D004486 8.3e-13 77.8 92 50.0
PSO210G4043 Papaver somniferum HOM05D003796 ORTHO05D004486 2.0e-11 73.2 143 36.4
Sc19g0002760 Simmondsia chinensis HOM05D003796 ORTHO05D004486 1.7e-10 70.1 45 71.1
Hund03191 Selenicereus undatus HOM05D003796 ORTHO05D004486 1.5e-09 67.0 132 38.6
CBR_g31497 Chara braunii HOM05D003796 ORTHO05D004486 9.5e-09 64.3 63 44.4
SEGI_15351 Sequoiadendron giganteum HOM05D003796 ORTHO05D004486 9.5e-09 64.3 78 38.5
Pp3c14_20300 Physcomitrium patens HOM05D003796 ORTHO05D004486 3.0e-07 59.3 68 42.6
AagrBONN_evm.TU.Sc2ySwM_117.3751 Anthoceros agrestis HOM05D003796 ORTHO05D004486 4.0e-07 58.9 73 41.1
Psat7g207840 Pisum sativum HOM05D003796 ORTHO05D004486 5.2e-07 58.5 37 64.9


User provided reference genes

Program Settings