Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 1.5e-95 352.8 177 100.0
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 3.6e-41 172.2 97 88.7
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 7.1e-37 157.9 98 82.7
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 6.0e-36 154.8 98 81.6
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 6.9e-32 141.4 98 75.5
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 1.5e-31 140.2 97 76.3
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 2.2e-30 136.3 97 71.1
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 6.4e-30 134.8 96 71.9
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 1.1e-29 134.0 95 73.7
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 1.9e-29 133.3 97 70.1
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 1.9e-29 133.3 96 70.8
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 1.9e-29 133.3 140 53.6
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 7.1e-29 131.3 97 71.1
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 7.1e-29 131.3 97 71.1
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 7.1e-29 131.3 97 71.1
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 3.5e-28 129.0 96 71.9
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 4.6e-28 128.6 97 71.1
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 1.3e-27 127.1 96 66.7
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 1.8e-27 126.7 97 70.1
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 1.8e-27 126.7 97 69.1
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 2.3e-27 126.3 97 68.0
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 3.0e-27 125.9 104 62.5
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 3.9e-27 125.6 90 70.0
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 8.7e-27 124.4 98 68.4
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 8.7e-27 124.4 97 67.0
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 8.7e-27 124.4 97 70.1
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 1.5e-26 123.6 97 68.0
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 1.5e-26 123.6 97 69.1
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.9e-26 123.2 97 66.0
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 4.3e-26 122.1 99 69.7
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 5.6e-26 121.7 97 67.0
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 5.6e-26 121.7 96 67.7
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 5.6e-26 121.7 93 67.7
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 9.6e-26 120.9 92 68.5
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 9.6e-26 120.9 97 67.0
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 9.6e-26 120.9 97 66.0
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 1.3e-25 120.6 97 66.0
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 1.6e-25 120.2 97 66.0
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 4.8e-25 118.6 94 67.0
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 4.8e-25 118.6 97 64.9
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 6.2e-25 118.2 87 67.8
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 1.4e-24 117.1 93 66.7
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 1.8e-24 116.7 94 66.0
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 2.4e-24 116.3 97 64.9
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 2.4e-24 116.3 97 66.0
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 4.0e-24 115.5 94 64.9
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 5.3e-24 115.2 98 65.3
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 9.0e-24 114.4 93 65.6
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 1.2e-23 114.0 93 67.7
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 1.5e-23 113.6 99 64.6
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 1.5e-23 113.6 97 68.0
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 2.0e-23 113.2 98 66.3
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 3.4e-23 112.5 87 64.4
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 3.4e-23 112.5 93 66.7
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 3.4e-23 112.5 98 62.2
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 7.6e-23 111.3 93 65.6
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 7.6e-23 111.3 93 65.6
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 1.7e-22 110.2 98 61.2
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 2.2e-22 109.8 99 60.6
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 3.8e-22 109.0 90 65.6
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 3.8e-22 109.0 96 65.6
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 3.8e-22 109.0 97 62.9
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 4.9e-22 108.6 90 65.6
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 4.9e-22 108.6 99 59.6
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 4.9e-22 108.6 96 62.5
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 6.5e-22 108.2 97 61.9
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 1.1e-21 107.5 99 59.6
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 1.4e-21 107.1 87 62.1
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 1.9e-21 106.7 95 61.1
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 3.2e-21 105.9 94 63.8
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 4.2e-21 105.5 90 63.3
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 5.5e-21 105.1 94 63.8
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 5.5e-21 105.1 94 63.8
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 7.1e-21 104.8 90 63.3
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 9.3e-21 104.4 100 59.0
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 2.7e-20 102.8 94 62.8
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 2.7e-20 102.8 98 58.2
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 2.7e-20 102.8 96 60.4
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 6.0e-20 101.7 94 61.7
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.3e-19 100.5 89 60.7
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 2.3e-19 99.8 95 55.8
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 1.9e-18 96.7 93 62.4
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 1.9e-18 96.7 93 62.4
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 2.5e-18 96.3 93 62.4
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 7.4e-18 94.7 93 61.3
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 1.3e-17 94.0 84 58.3
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 2.8e-17 92.8 90 60.0
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 6.2e-17 91.7 93 60.2
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 6.9e-16 88.2 112 43.8
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 7.6e-15 84.7 83 60.2
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 1.3e-14 84.0 97 48.5
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 3.8e-14 82.4 87 50.6
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 2.5e-13 79.7 75 60.0
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 4.2e-13 79.0 101 51.5
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 9.3e-13 77.8 56 71.4
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 2.7e-12 76.3 68 60.3
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 4.6e-12 75.5 88 53.4
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 4.6e-12 75.5 88 50.0
Hund16811 Selenicereus undatus HOM05D007473 ORTHO05D009459 3.1e-08 62.8 61 55.7
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 1.7e-06 57.0 95 44.2


User provided reference genes

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