Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 1.9e-110 402.5 202 100.0
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 1.7e-82 309.7 208 80.8
Potri.019G084500 Populus trichocarpa HOM05D007935 ORTHO05D007393 9.8e-67 257.3 204 71.1
Sabra19G0095700 Salix brachista HOM05D007935 ORTHO05D007393 2.3e-60 236.1 205 65.9
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 3.0e-31 139.4 210 46.7
Manes.18G100400 Manihot esculenta HOM05D007935 ORTHO05D007393 1.1e-28 131.0 200 45.0
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 1.4e-28 130.6 174 46.6
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 4.2e-25 119.0 186 45.2
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 4.2e-25 119.0 187 44.4
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 2.3e-23 113.2 186 44.6
Gorai.006G131900 Gossypium raimondii HOM05D007935 ORTHO05D007393 1.9e-22 110.2 186 44.6
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 5.6e-22 108.6 185 46.5
Gohir.D09G114200 Gossypium hirsutum HOM05D007935 ORTHO05D007393 1.6e-21 107.1 186 44.1
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 4.5e-19 99.0 185 38.4
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 3.8e-18 95.9 184 41.8
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 2.5e-17 93.2 185 36.2
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 7.1e-17 91.7 168 42.9
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 9.3e-17 91.3 175 41.7
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 9.3e-17 91.3 196 38.8
CiPaw.16G062200 Carya illinoinensis HOM05D007935 ORTHO05D007393 4.6e-16 89.0 188 39.4
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 4.6e-16 89.0 186 38.2
Rhsim06G0096700 Rhododendron simsii HOM05D007935 ORTHO05D007393 4.6e-16 89.0 182 40.1
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 3.0e-15 86.3 189 36.0
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 2.5e-14 83.2 183 37.2
FvH4_4g19940 Fragaria vesca HOM05D007935 ORTHO05D007393 9.6e-14 81.3 189 35.4
FAN12G0476 Fragaria x ananassa HOM05D007935 ORTHO05D007393 9.6e-14 81.3 189 36.0
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 1.6e-13 80.5 190 35.3
Ciclev10003091m.g Citrus clementina HOM05D007935 ORTHO05D007393 6.2e-13 78.6 164 36.6
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 6.2e-13 78.6 170 34.7
Nitab4.5_0000560g0100 Nicotiana tabacum HOM05D007935 ORTHO05D007393 1.8e-12 77.0 186 32.8
FAN07G1822 Fragaria x ananassa HOM05D007935 ORTHO05D007393 9.0e-12 74.7 180 36.1
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 1.5e-11 73.9 176 36.4
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 3.4e-11 72.8 173 32.4
Eucgr.F04128 Eucalyptus grandis HOM05D007935 ORTHO05D007393 1.7e-10 70.5 194 33.0
Atru.chr13.1798 Acer truncatum HOM05D007935 ORTHO05D007393 2.9e-10 69.7 185 39.5
Glyma.20G176200 Glycine max HOM05D007935 ORTHO05D007393 5.0e-10 68.9 173 34.7
Hma1.2p1_0363F.1_g136610 Hydrangea macrophylla HOM05D007935 ORTHO05D007393 8.4e-10 68.2 187 32.1
AUR62004654 Chenopodium quinoa HOM05D007935 ORTHO05D007393 1.1e-09 67.8 180 33.9
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 1.1e-09 67.8 185 31.4
SalBow7G1894 Salvia bowleyana HOM05D007935 ORTHO05D007393 1.1e-09 67.8 186 33.3
Migut.C01245 Erythranthe guttata HOM05D007935 ORTHO05D007393 4.2e-09 65.9 185 29.7
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 7.1e-09 65.1 171 33.3
Solyc11g017390.2 Solanum lycopersicum HOM05D007935 ORTHO05D007393 7.1e-09 65.1 167 32.3
Nitab4.5_0000422g0110 Nicotiana tabacum HOM05D007935 ORTHO05D007393 1.2e-08 64.3 209 29.2
Dinv41698 Davidia involucrata HOM05D007935 ORTHO05D007393 1.6e-08 63.9 161 36.6
Glyma.10G215500 Glycine max HOM05D007935 ORTHO05D007393 2.1e-08 63.5 171 33.9
Oeu039600.1 Olea europaea HOM05D007935 ORTHO05D007393 2.1e-08 63.5 175 32.6
RcHm_v2.0_Chr6g0272051 Rosa chinensis HOM05D007935 ORTHO05D007393 2.7e-08 63.2 93 44.1
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 2.7e-08 63.2 168 32.7
Manes.12G081400 Manihot esculenta HOM05D009958 ORTHO05D007393 6.1e-08 62.0 185 31.4
ClCG09G010460 Citrullus lanatus HOM05D029613 ORTHO05D007393 1.0e-07 61.2 182 31.9
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 1.8e-07 60.5 179 33.0
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 2.3e-07 60.1 168 32.7
CiPaw.15G082200 Carya illinoinensis HOM05D007935 ORTHO05D007393 6.7e-07 58.5 178 36.0
SGA_v2.0_scaffold118G32471 Striga asiatica HOM05D007935 ORTHO05D007393 6.7e-07 58.5 82 42.7
CiPaw.15G082300 Carya illinoinensis HOM05D007935 ORTHO05D007393 8.7e-07 58.2 174 32.8
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 8.7e-07 58.2 172 31.4
Manes.13G153300 Manihot esculenta HOM05D009958 ORTHO05D007393 1.1e-06 57.8 77 42.9
Oeu017878.1 Olea europaea HOM05D007935 ORTHO05D007393 1.5e-06 57.4 172 32.0
Lj4P507T35 Lonicera japonica HOM05D007935 ORTHO05D007393 3.3e-06 56.2 131 35.9
arahy.Tifrunner.gnm1.ann1.QZIQ5C Arachis hypogaea HOM05D007935 ORTHO05D007393 4.3e-06 55.8 178 32.0
CSS0018652 Camellia sinensis var. sinensis HOM05D007935 ORTHO05D007393 7.4e-06 55.1 181 34.3
THA.LOC104810516 Tarenaya hassleriana HOM05D010479 ORTHO05D007393 7.4e-06 55.1 91 41.8
EL10Ac1g00075 Beta vulgaris HOM05D007935 ORTHO05D007393 9.7e-06 54.7 147 35.4
Sc23g0001170 Simmondsia chinensis HOM05D007935 ORTHO05D007393 9.7e-06 54.7 154 35.7


User provided reference genes

Program Settings