Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0096100 Salix brachista HOM05D004490 ORTHO05D005353 9.9e-103 376.7 180 100.0
Potri.019G083700 Populus trichocarpa HOM05D004490 ORTHO05D005353 2.9e-38 162.5 183 54.6
Sabra19G0095100 Salix brachista HOM05D004490 ORTHO05D005353 7.5e-34 147.9 225 44.9
CiPaw.16G061300 Carya illinoinensis HOM05D004490 ORTHO05D005353 6.8e-27 124.8 175 46.9
vmacro11670 Vaccinium macrocarpon HOM05D004490 ORTHO05D005353 2.6e-26 122.9 173 44.5
Hma1.2p1_0363F.1_g136650 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 2.4e-24 116.3 181 42.5
Hma1.2p1_0363F.1_g136660 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 2.4e-24 116.3 181 42.5
Dinv41710 Davidia involucrata HOM05D004490 ORTHO05D005353 9.2e-24 114.4 175 44.0
Haze_17934 Corylus avellana HOM05D004490 ORTHO05D005353 1.2e-23 114.0 168 47.0
Atru.chr12.1269 Acer truncatum HOM05D004490 ORTHO05D005353 2.0e-23 113.2 177 42.4
CSS0029963 Camellia sinensis var. sinensis HOM05D004490 ORTHO05D005353 2.7e-23 112.8 174 42.5
Cfa018184 Carpinus fangiana HOM05D004490 ORTHO05D005353 3.5e-23 112.5 169 46.2
Manes.02G191800 Manihot esculenta HOM05D004490 ORTHO05D005353 5.0e-22 108.6 182 42.9
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 2.5e-21 106.3 170 41.8
GSVIVG01034483001 Vitis vinifera HOM05D004490 ORTHO05D005353 5.6e-21 105.1 169 44.4
TWI63G0531 Tripterygium wilfordii HOM05D004490 ORTHO05D005353 7.3e-21 104.8 177 39.0
Rhsim11G0059700 Rhododendron simsii HOM05D004490 ORTHO05D005353 6.1e-20 101.7 169 38.5
Lj5g0002115 Lotus japonicus HOM05D004490 ORTHO05D005353 8.0e-20 101.3 176 40.9
arahy.Tifrunner.gnm1.ann1.2Y7GNB Arachis hypogaea HOM05D004490 ORTHO05D005353 1.4e-19 100.5 180 36.7
arahy.Tifrunner.gnm1.ann1.90XUFN Arachis hypogaea HOM05D004490 ORTHO05D005353 1.8e-19 100.1 180 36.7
MELO3C024104.2 Cucumis melo HOM05D004490 ORTHO05D005353 3.0e-19 99.4 183 36.6
Thecc.08G183200 Theobroma cacao HOM05D004490 ORTHO05D005353 3.0e-19 99.4 177 40.1
CsaV3_7G024020 Cucumis sativus L. HOM05D004490 ORTHO05D005353 6.8e-19 98.2 182 37.4
Glyma.20G175700 Glycine max HOM05D004490 ORTHO05D005353 1.5e-18 97.1 184 39.1
Gorai.013G140400 Gossypium raimondii HOM05D004490 ORTHO05D005353 2.0e-18 96.7 177 39.5
Lalb_Chr21g0305821 Lupinus albus HOM05D004490 ORTHO05D005353 2.0e-18 96.7 183 38.3
TAR208G0002 Trochodendron aralioides HOM05D004490 ORTHO05D005353 2.0e-18 96.7 177 39.5
Gohir.D13G125400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 3.4e-18 95.9 177 39.0
Aqoxy2G03181 Aquilegia oxysepala HOM05D004490 ORTHO05D005353 5.7e-18 95.1 175 36.6
Glyma.10G216200 Glycine max HOM05D004490 ORTHO05D005353 5.7e-18 95.1 172 40.7
Cc10_g11460 Coffea canephora HOM05D004490 ORTHO05D005353 7.5e-18 94.7 170 38.8
AL2G20400 Arabidopsis lyrata HOM05D004490 ORTHO05D005353 9.8e-18 94.4 179 39.1
Oeu039613.1 Olea europaea HOM05D004490 ORTHO05D005353 1.7e-17 93.6 179 36.9
ClCG09G010540 Citrullus lanatus HOM05D004490 ORTHO05D005353 2.9e-17 92.8 185 36.2
PGR102G0893 Punica granatum HOM05D004490 ORTHO05D005353 2.9e-17 92.8 183 39.3
Gohir.A13G121400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 3.7e-17 92.4 177 39.5
Aa31LG9G14890 Aethionema arabicum HOM05D004490 ORTHO05D005353 4.9e-17 92.0 184 35.9
Ah.05g178090 Amaranthus hybridus HOM05D004490 ORTHO05D005353 4.9e-17 92.0 172 40.1
Migut.C01248 Erythranthe guttata HOM05D004490 ORTHO05D005353 4.9e-17 92.0 177 36.7
Sp6g08010 Schrenkiella parvula HOM05D004490 ORTHO05D005353 8.3e-17 91.3 180 38.3
AUR62022689 Chenopodium quinoa HOM05D004490 ORTHO05D005353 1.1e-16 90.9 172 38.4
MSTRG.1522 Avicennia marina HOM05D004490 ORTHO05D005353 1.4e-16 90.5 175 38.9
EL10Ac1g00080 Beta vulgaris HOM05D004490 ORTHO05D005353 1.4e-16 90.5 177 36.2
CANSAT64G2929 Cannabis sativa HOM05D004490 ORTHO05D005353 1.8e-16 90.1 171 38.6
AT1G65280 Arabidopsis thaliana HOM05D004490 ORTHO05D005353 2.4e-16 89.7 180 36.7
Carub.0002s1095 Capsella rubella HOM05D004490 ORTHO05D005353 2.4e-16 89.7 179 37.4
Lj7A289G25 Lonicera japonica HOM05D004490 ORTHO05D005353 2.4e-16 89.7 178 37.1
Sed0010515 Sechium edule HOM05D004490 ORTHO05D005353 2.4e-16 89.7 183 37.2
AUR62004649 Chenopodium quinoa HOM05D004490 ORTHO05D005353 4.1e-16 89.0 171 38.0
BcaC04g20957 Brassica carinata HOM05D004490 ORTHO05D005353 5.4e-16 88.6 177 36.2
BolC9t56586H Brassica oleracea HOM05D004490 ORTHO05D005353 5.4e-16 88.6 177 36.2
VMungo0720G0360 Vigna mungo HOM05D004490 ORTHO05D005353 5.4e-16 88.6 181 35.4
Duzib177G0006 Durio zibethinus HOM05D004490 ORTHO05D005353 7.0e-16 88.2 177 39.5
Ciclev10000724m.g Citrus clementina HOM05D004490 ORTHO05D005353 9.2e-16 87.8 193 37.3
A09p29500 Brassica napus HOM05D004490 ORTHO05D005353 1.2e-15 87.4 179 38.0
Phvul.007G089700 Phaseolus vulgaris HOM05D004490 ORTHO05D005353 1.2e-15 87.4 171 38.0
SalBow4G3000 Salvia bowleyana HOM05D004490 ORTHO05D005353 2.0e-15 86.7 178 33.1
SalBow7G0993 Salvia bowleyana HOM05D004490 ORTHO05D005353 2.0e-15 86.7 178 33.1
CARHR056930 Cardamine hirsuta HOM05D004490 ORTHO05D005353 3.5e-15 85.9 177 35.6
Hund27085 Selenicereus undatus HOM05D004490 ORTHO05D005353 5.9e-15 85.1 184 35.9
BraA09t38516Z Brassica rapa HOM05D004490 ORTHO05D005353 7.8e-15 84.7 177 35.6
MD04G1003500 Malus domestica HOM05D004490 ORTHO05D005353 1.0e-14 84.3 182 37.4
Eucgr.F04124 Eucalyptus grandis HOM05D004490 ORTHO05D005353 1.3e-14 84.0 185 35.7
DCAR_014360 Daucus carota HOM05D004490 ORTHO05D005353 3.0e-14 82.8 185 37.3
Oeu021013.3 Olea europaea HOM05D004490 ORTHO05D005353 5.0e-14 82.0 183 33.3
Sc23g0001210 Simmondsia chinensis HOM05D004490 ORTHO05D005353 5.0e-14 82.0 103 46.6
Ca_10614_v3 Cicer arietinum L. HOM05D004490 ORTHO05D005353 6.6e-14 81.6 170 38.2
Psat6g187400 Pisum sativum HOM05D004490 ORTHO05D005353 8.6e-14 81.3 183 37.7
Thhalv10028527m.g Eutrema salsugineum HOM05D004490 ORTHO05D005353 1.1e-13 80.9 183 35.5
THA.LOC104816311 Tarenaya hassleriana HOM05D004490 ORTHO05D005353 1.9e-13 80.1 173 36.4
QL02p033840 Quercus lobata HOM05D004490 ORTHO05D005353 2.5e-13 79.7 259 29.3
RcHm_v2.0_Chr4g0398261 Rosa chinensis HOM05D004490 ORTHO05D005353 2.5e-13 79.7 186 35.5
Prupe.8G058000 Prunus persica HOM05D004490 ORTHO05D005353 5.6e-13 78.6 188 35.6
Medtr1g096410 Medicago truncatula HOM05D004490 ORTHO05D005353 7.3e-13 78.2 183 36.1
Nitab4.5_0002074g0010 Nicotiana tabacum HOM05D004490 ORTHO05D005353 7.3e-13 78.2 206 32.0
Nn5g27710 Nelumbo nucifera HOM05D004490 ORTHO05D005353 9.5e-13 77.8 175 37.7
PSO017G7136 Papaver somniferum HOM05D004490 ORTHO05D005353 9.5e-13 77.8 176 33.5
PSO063G0599 Papaver somniferum HOM05D004490 ORTHO05D005353 1.2e-12 77.4 176 33.5
HanXRQChr10g0290501 Helianthus annuus HOM05D004490 ORTHO05D005353 1.6e-12 77.0 183 33.3
ECA234G1973 Erigeron canadensis HOM05D004490 ORTHO05D005353 3.6e-12 75.9 174 35.1
CiPaw.15G081800 Carya illinoinensis HOM05D004490 ORTHO05D005353 8.0e-12 74.7 105 39.0
Cc00_g05790 Coffea canephora HOM05D004490 ORTHO05D005353 1.1e-11 74.3 103 40.8
Peaxi162Scf00848g00115 Petunia axillaris HOM05D004490 ORTHO05D005353 1.1e-11 74.3 172 33.7
FvH4_4g06470 Fragaria vesca HOM05D004490 ORTHO05D005353 1.4e-11 73.9 105 43.8
FAN12G1529 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.4e-11 73.9 105 43.8
BcaB01g01408 Brassica carinata HOM05D004490 ORTHO05D005353 2.3e-11 73.2 184 32.6
CAN.G905.35 Capsicum annuum HOM05D004490 ORTHO05D005353 3.1e-11 72.8 206 30.6
Lsat_1_v5_gn_5_105541 Lactuca sativa HOM05D004490 ORTHO05D005353 5.2e-11 72.0 102 44.1
TPR.G8816 Trifolium pratense HOM05D004490 ORTHO05D005353 6.8e-11 71.6 184 35.9
SGA_v2.0_scaffold118G32473 Striga asiatica HOM05D004490 ORTHO05D005353 2.6e-10 69.7 179 32.4
FAN07G2233 Fragaria x ananassa HOM05D004490 ORTHO05D005353 3.4e-10 69.3 105 41.9
Nitab4.5_0018466g0010 Nicotiana tabacum HOM05D004490 ORTHO05D005353 4.4e-10 68.9 129 35.7
Solyc11g018670.3 Solanum lycopersicum HOM05D004490 ORTHO05D005353 4.4e-10 68.9 206 29.6
Sopen11g009650 Solanum pennellii HOM05D004490 ORTHO05D005353 3.7e-09 65.9 206 29.1
ATR1098G081 Amborella trichopoda HOM05D004490 ORTHO05D008312 4.9e-09 65.5 184 31.0
Cpa.g.sc66.44 Carica papaya HOM05D004490 ORTHO05D005353 4.9e-09 65.5 92 48.9
CDE08G1471 Ceratophyllum demersum HOM05D004490 ORTHO05D005353 4.9e-09 65.5 171 34.5
FAN17G1649 Fragaria x ananassa HOM05D004490 ORTHO05D005353 5.4e-08 62.0 123 39.0
Cpa.g.sc66.45 Carica papaya HOM05D004490 ORTHO05D005353 1.7e-06 57.0 78 42.3
FvH4_3g44966 Fragaria vesca HOM05D004490 ORTHO05D005353 2.3e-06 56.6 184 32.6


User provided reference genes

Program Settings