Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0088400 Salix brachista HOM05D008742 ORTHO05D010377 2.5e-203 711.8 345 100.0
Potri.013G102300 Populus trichocarpa HOM05D008742 ORTHO05D010377 6.5e-135 484.6 344 74.7
Cfa008115 Carpinus fangiana HOM05D008742 ORTHO05D010377 3.7e-58 229.6 336 46.7
Manes.18G121000 Manihot esculenta HOM05D008742 ORTHO05D010377 8.3e-58 228.4 350 43.1
TAR628G0950 Trochodendron aralioides HOM05D008742 ORTHO05D010377 3.5e-56 223.0 350 40.9
GSVIVG01025912001 Vitis vinifera HOM05D008742 ORTHO05D010377 2.5e-54 216.9 255 50.6
QL10p026828 Quercus lobata HOM05D008742 ORTHO05D010377 9.5e-54 214.9 352 42.0
CiPaw.03G017300 Carya illinoinensis HOM05D008742 ORTHO05D010377 2.1e-53 213.8 342 42.4
Aqoxy6G00073 Aquilegia oxysepala HOM05D008742 ORTHO05D010377 2.6e-51 206.8 306 40.8
Gohir.D13G122200 Gossypium hirsutum HOM05D008742 ORTHO05D010377 2.6e-51 206.8 347 41.2
Gorai.013G136900 Gossypium raimondii HOM05D008742 ORTHO05D010377 2.9e-50 203.4 347 40.3
Ciclev10021221m.g Citrus clementina HOM05D008742 ORTHO05D010377 1.1e-49 201.4 381 38.3
CANSAT25G0509 Cannabis sativa HOM05D008742 ORTHO05D010377 5.4e-49 199.1 346 39.6
Thecc.08G171700 Theobroma cacao HOM05D008742 ORTHO05D010377 1.3e-47 194.5 348 38.5
Gohir.A13G118401 Gossypium hirsutum HOM05D008742 ORTHO05D010377 1.9e-46 190.7 352 39.2
Eucgr.F02959 Eucalyptus grandis HOM05D008742 ORTHO05D010377 3.4e-43 179.9 330 37.0
PGR042G1068 Punica granatum HOM05D008742 ORTHO05D010377 4.9e-42 176.0 315 37.8
Solyc11g031970.2 Solanum lycopersicum HOM05D008742 ORTHO05D010377 6.0e-40 169.1 315 36.5
MSTRG.25490 Avicennia marina HOM05D008742 ORTHO05D010377 2.5e-38 163.7 300 37.7
Sopen11g014500 Solanum pennellii HOM05D008742 ORTHO05D010377 4.3e-38 162.9 319 36.7
PGSC0003DMG400031182 Solanum tuberosum HOM05D008742 ORTHO05D010377 9.6e-38 161.8 319 37.0
Nitab4.5_0001359g0010 Nicotiana tabacum HOM05D008742 ORTHO05D010377 2.8e-37 160.2 350 37.1
Nitab4.5_0001278g0110 Nicotiana tabacum HOM05D008742 ORTHO05D010377 4.8e-37 159.5 348 35.3
PSO170G1705 Papaver somniferum HOM05D008742 ORTHO05D010377 1.1e-36 158.3 306 38.2
PSO782G1932 Papaver somniferum HOM05D008742 ORTHO05D010377 1.1e-36 158.3 306 37.3
Cc10_g16420 Coffea canephora HOM05D008742 ORTHO05D010377 5.8e-35 152.5 244 41.8
MBI03_g14517_MAGBIO Magnolia biondii HOM05D008742 ORTHO05D010377 1.7e-34 151.0 321 36.1
Dinv41793 Davidia involucrata HOM05D008742 ORTHO05D010377 5.4e-33 146.0 185 47.6
Peaxi162Scf00688g00019 Petunia axillaris HOM05D008742 ORTHO05D010377 5.4e-33 146.0 345 31.9
Cpa.g.sc21.53 Carica papaya HOM05D008742 ORTHO05D010377 4.6e-32 142.9 266 38.0
SalBow7G3290 Salvia bowleyana HOM05D008742 ORTHO05D010377 7.9e-32 142.1 344 33.4
MELO3C022199.2 Cucumis melo HOM05D008742 ORTHO05D010377 1.3e-29 134.8 343 30.3
CsaV3_5G040230 Cucumis sativus L. HOM05D008742 ORTHO05D010377 2.1e-29 134.0 346 32.1
Migut.C01345 Erythranthe guttata HOM05D008742 ORTHO05D010377 6.2e-29 132.5 343 33.5
ATR1136G217 Amborella trichopoda HOM05D008742 ORTHO05D010377 1.8e-28 131.0 287 34.8
ClCG08G000630 Citrullus lanatus HOM05D008742 ORTHO05D010377 4.0e-28 129.8 300 31.7
TWI59G0981 Tripterygium wilfordii HOM05D008742 ORTHO05D010377 1.1e-25 121.7 201 38.3
Haze_13917 Corylus avellana HOM05D008742 ORTHO05D010377 2.6e-19 100.5 154 44.8
THA.LOC104815909 Tarenaya hassleriana HOM05D012304 ORTHO05D010377 1.9e-17 94.4 322 26.7
Sed0018339 Sechium edule HOM05D008742 ORTHO05D010377 3.3e-14 83.6 322 26.1
Sp6g07500 Schrenkiella parvula HOM05D012304 ORTHO05D010377 9.0e-12 75.5 325 22.8
AL6G43670 Arabidopsis lyrata HOM05D012304 ORTHO05D010377 1.3e-10 71.6 298 24.5
Thhalv10028904m.g Eutrema salsugineum HOM05D012304 ORTHO05D010377 3.8e-10 70.1 297 25.6
Mapoly0060s0075 Marchantia polymorpha HOM05D020309 ORTHO05D010377 3.8e-10 70.1 289 24.2
AT4G09970 Arabidopsis thaliana HOM05D012304 ORTHO05D010377 6.5e-10 69.3 295 25.4
Duzib177G0864 Durio zibethinus HOM05D008742 ORTHO05D010377 6.5e-10 69.3 57 57.9
CDE07G1611 Ceratophyllum demersum HOM05D008742 ORTHO05D010377 1.9e-09 67.8 293 25.9
Carub.0006s2851 Capsella rubella HOM05D012304 ORTHO05D010377 6.1e-08 62.8 295 24.4
Aa31LG9G12020 Aethionema arabicum HOM05D012304 ORTHO05D010377 1.8e-07 61.2 296 25.0
Duzib177G0721 Durio zibethinus HOM05D008742 ORTHO05D010377 1.1e-06 58.5 127 33.9
Migut.C01342 Erythranthe guttata HOM05D008742 ORTHO05D010377 4.3e-06 56.6 113 43.4
Pp3c3_11780 Physcomitrium patens HOM05D020309 ORTHO05D010377 5.7e-06 56.2 286 22.7


User provided reference genes

Program Settings