Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0079500 Salix brachista HOM05D009064 ORTHO05D010640 7.5e-62 240.4 122 100.0
Potri.013G083500 Populus trichocarpa HOM05D009064 ORTHO05D010640 2.0e-46 189.1 122 78.7
Manes.07G140000 Manihot esculenta HOM05D009064 ORTHO05D010640 2.7e-19 99.0 127 50.4
QL08p064693 Quercus lobata HOM05D026914 ORTHO05D010640 4.8e-16 88.2 111 50.5
Glyma.06G144000 Glycine max HOM05D009064 ORTHO05D010640 1.1e-15 87.0 110 53.6
COL.COLO4_19449 Corchorus olitorius HOM05D009064 ORTHO05D010640 1.4e-15 86.7 125 45.6
CiPaw.01G305700 Carya illinoinensis HOM05D009064 ORTHO05D010640 2.4e-15 85.9 114 43.0
Duzib114G0015 Durio zibethinus HOM05D009064 ORTHO05D010640 2.4e-15 85.9 117 45.3
Cfa001215 Carpinus fangiana HOM05D009064 ORTHO05D010640 4.0e-15 85.1 127 49.6
TAR623G0979 Trochodendron aralioides HOM05D009064 ORTHO05D010640 4.0e-15 85.1 109 47.7
Haze_17348 Corylus avellana HOM05D009064 ORTHO05D010640 1.2e-14 83.6 125 44.8
Thecc.10G183500 Theobroma cacao HOM05D009064 ORTHO05D010640 2.6e-14 82.4 120 45.0
Phvul.009G142200 Phaseolus vulgaris HOM05D009064 ORTHO05D010640 4.5e-14 81.6 124 41.9
Hma1.2p1_2086F.1_g313715 Hydrangea macrophylla HOM05D009064 ORTHO05D010640 2.2e-13 79.3 128 40.6
QL08p064726 Quercus lobata HOM05D026914 ORTHO05D010640 1.9e-12 76.3 115 42.6
QL08p064688 Quercus lobata HOM05D005830 ORTHO05D007212 4.2e-12 75.1 111 44.1
QL08p064721 Quercus lobata HOM05D026914 ORTHO05D010640 1.2e-11 73.6 110 42.7
Rhsim03G0151100 Rhododendron simsii HOM05D009064 ORTHO05D010640 2.1e-11 72.8 112 44.6
Prupe.2G262900 Prunus persica HOM05D025368 ORTHO05D010640 3.5e-11 72.0 124 40.3
QL02p068966 Quercus lobata HOM05D026914 ORTHO05D010640 3.5e-11 72.0 111 44.1
Ciclev10033100m.g Citrus clementina HOM05D009064 ORTHO05D010640 3.0e-10 68.9 125 40.0
Cpa.g.sc19.77 Carica papaya HOM05D009064 ORTHO05D010640 5.1e-10 68.2 112 38.4
Nn2g10339 Nelumbo nucifera HOM05D009064 ORTHO05D010640 5.1e-10 68.2 122 36.9
FAN03G3397 Fragaria x ananassa HOM05D025368 ORTHO05D010640 1.5e-09 66.6 78 43.6
Gohir.A13G007400 Gossypium hirsutum HOM05D009064 ORTHO05D010640 5.6e-09 64.7 128 38.3
FAN06G3295 Fragaria x ananassa HOM05D025368 ORTHO05D010640 7.4e-09 64.3 128 35.9
FAN10G4130 Fragaria x ananassa HOM05D025368 ORTHO05D010640 1.3e-08 63.5 78 43.6
CSS0028995 Camellia sinensis var. sinensis HOM05D020056 ORTHO05D010640 2.1e-08 62.8 112 42.9
Eucgr.G03127 Eucalyptus grandis HOM05D009064 ORTHO05D010640 2.1e-08 62.8 128 41.4
Gohir.D13G007500 Gossypium hirsutum HOM05D009064 ORTHO05D010640 3.7e-08 62.0 121 38.0
Aqoxy4G02368 Aquilegia oxysepala HOM05D009064 ORTHO05D010640 4.8e-08 61.6 111 36.9
Glyma.04G221450 Glycine max HOM05D009064 ORTHO05D010640 4.8e-08 61.6 85 44.7
Dinv26058 Davidia involucrata HOM05D009064 ORTHO05D010640 6.2e-08 61.2 80 45.0
Gorai.009G292900 Gossypium raimondii HOM05D009064 ORTHO05D010640 6.2e-08 61.2 108 39.8
Medtr3g094130 Medicago truncatula HOM05D009064 ORTHO05D010640 6.2e-08 61.2 115 41.7
CSS0018674 Camellia sinensis var. sinensis HOM05D020056 ORTHO05D010640 8.1e-08 60.8 112 42.0
Gohir.D05G279400 Gossypium hirsutum HOM05D009064 ORTHO05D010640 1.4e-07 60.1 108 39.8
Manes.10G000157 Manihot esculenta HOM05D051481 ORTHO05D010640 4.0e-07 58.5 90 40.0
Gorai.013G007900 Gossypium raimondii HOM05D009064 ORTHO05D010640 6.9e-07 57.8 121 36.4
Lsat_1_v5_gn_2_125281 Lactuca sativa HOM05D020056 ORTHO05D010640 6.9e-07 57.8 118 37.3
Lalb_Chr23g0272261 Lupinus albus HOM05D009064 ORTHO05D010640 6.9e-07 57.8 88 39.8
Atru.chr12.161 Acer truncatum HOM05D009064 ORTHO05D010640 2.0e-06 56.2 106 34.0
Potri.016G134100 Populus trichocarpa HOM05D038816 ORTHO05D019287 3.4e-06 55.5 106 32.1
Aa31LG3G3960 Aethionema arabicum HOM05D009611 ORTHO05D011750 5.8e-06 54.7 77 45.5


User provided reference genes

Program Settings