Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 2.6e-172 608.6 308 100.0
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 2.3e-155 552.4 308 90.9
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 4.6e-124 448.4 309 74.8
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 1.1e-122 443.7 308 74.0
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 2.5e-122 442.6 310 74.5
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 5.8e-119 431.4 306 72.5
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 1.1e-117 427.2 308 73.4
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 2.4e-117 426.0 257 82.1
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 4.1e-117 425.2 260 79.6
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 1.6e-116 423.3 274 78.1
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 6.6e-115 417.9 305 69.8
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 6.6e-115 417.9 311 70.1
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 1.1e-114 417.2 314 68.2
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 1.5e-114 416.8 289 73.7
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 3.6e-113 412.1 285 72.6
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 1.2e-111 407.1 309 68.0
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 3.4e-111 405.6 310 69.4
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 1.9e-109 399.8 302 68.9
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 1.9e-109 399.8 319 68.0
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 2.4e-109 399.4 273 72.2
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 2.4e-109 399.4 260 77.3
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 4.2e-109 398.7 310 68.1
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 4.2e-109 398.7 286 69.9
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 9.3e-109 397.5 295 69.2
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 3.0e-107 392.5 281 69.4
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 3.9e-107 392.1 257 76.7
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 8.7e-107 391.0 314 67.2
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 2.5e-106 389.4 260 75.0
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 3.3e-106 389.0 277 69.0
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 5.6e-106 388.3 308 66.6
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 5.6e-106 388.3 243 77.0
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 7.3e-106 387.9 313 67.1
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.3e-105 387.1 277 68.6
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 2.8e-105 386.0 235 80.4
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 2.8e-105 386.0 302 67.5
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 2.8e-105 386.0 263 73.0
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 4.8e-105 385.2 232 81.0
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 4.8e-105 385.2 257 73.5
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 6.2e-105 384.8 302 64.9
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 1.1e-104 384.0 305 65.6
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 1.8e-104 383.3 257 74.7
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 1.8e-104 383.3 261 75.5
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 3.1e-104 382.5 313 67.1
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 3.1e-104 382.5 303 65.3
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 3.1e-104 382.5 308 64.6
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 1.2e-103 380.6 313 64.9
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 1.2e-103 380.6 309 66.0
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 2.6e-103 379.4 325 65.2
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 4.5e-103 378.6 316 62.7
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 4.5e-103 378.6 266 71.1
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 7.6e-103 377.9 300 64.7
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 1.3e-102 377.1 266 70.3
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 4.9e-102 375.2 301 62.8
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 4.9e-102 375.2 276 67.8
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 6.4e-102 374.8 266 70.3
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 6.4e-102 374.8 257 72.0
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 1.9e-101 373.2 248 73.8
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 2.4e-101 372.9 293 65.9
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 3.2e-101 372.5 278 70.5
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 5.4e-101 371.7 272 68.0
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 1.6e-100 370.2 268 71.3
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 1.6e-100 370.2 227 78.9
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 2.7e-100 369.4 251 74.1
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 6.7e-99 364.8 285 66.0
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 6.7e-99 364.8 304 64.5
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 1.5e-98 363.6 272 68.0
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 5.6e-98 361.7 277 67.5
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 9.6e-98 360.9 298 64.8
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 6.2e-97 358.2 292 62.7
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 1.4e-96 357.1 256 69.1
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 1.4e-96 357.1 318 59.7
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 3.1e-96 355.9 256 68.8
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 3.1e-96 355.9 308 63.0
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 6.9e-96 354.8 316 62.7
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 6.9e-96 354.8 272 65.8
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 1.2e-95 354.0 296 62.5
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 2.6e-95 352.8 253 69.2
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 5.8e-95 351.7 269 66.2
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 7.6e-95 351.3 295 61.4
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 9.9e-95 350.9 224 75.4
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 3.8e-94 349.0 239 71.5
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 3.2e-93 345.9 251 67.3
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 9.3e-93 344.4 255 67.1
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 9.3e-93 344.4 246 68.3
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 2.1e-92 343.2 276 64.5
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 2.7e-92 342.8 300 60.3
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 7.9e-92 341.3 275 63.3
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 1.3e-91 340.5 267 64.0
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 3.9e-91 339.0 246 67.5
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 8.7e-91 337.8 308 60.1
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 8.7e-91 337.8 308 60.1
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 4.8e-89 332.0 314 58.3
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 4.8e-89 332.0 303 59.7
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 1.4e-88 330.5 302 60.3
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 6.9e-88 328.2 225 71.1
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 1.7e-86 323.6 265 63.4
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 2.7e-84 316.2 264 62.5
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 2.4e-80 303.1 289 59.9
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 5.9e-79 298.5 217 69.1
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 5.9e-79 298.5 269 58.0
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 1.1e-72 277.7 249 53.4
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 4.1e-72 275.8 272 57.0
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 3.4e-71 272.7 260 54.2
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 1.3e-70 270.8 229 61.1
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 1.3e-65 254.2 253 51.8
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 5.2e-59 232.3 239 51.5
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 2.0e-58 230.3 269 47.2
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 7.4e-58 228.4 148 76.4
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 1.6e-55 220.7 196 56.1
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 3.1e-48 196.4 238 45.8
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 2.0e-26 124.0 221 36.7
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 1.1e-24 118.2 122 54.1
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 5.0e-22 109.4 139 48.9
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 2.1e-15 87.4 256 28.9
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 3.0e-14 83.6 64 59.4
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 3.0e-14 83.6 64 59.4
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 3.7e-09 66.6 233 29.6


User provided reference genes

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