Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0065300 Salix brachista HOM05D005356 ORTHO05D006596 1.1e-226 789.6 404 100.0
Potri.013G076100 Populus trichocarpa HOM05D005356 ORTHO05D006596 6.1e-209 730.7 408 92.4
Sabra19G0053800 Salix brachista HOM05D005356 ORTHO05D006596 5.0e-179 631.3 429 79.5
Manes.08G159200 Manihot esculenta HOM05D005356 ORTHO05D006596 2.2e-166 589.3 403 76.4
Thecc.05G227000 Theobroma cacao HOM05D005356 ORTHO05D006596 2.9e-163 578.9 414 74.2
Prupe.2G329800 Prunus persica HOM05D005356 ORTHO05D006596 3.4e-159 565.5 370 76.8
Atru.chr12.1818 Acer truncatum HOM05D005356 ORTHO05D006596 5.7e-159 564.7 410 72.9
CiPaw.05G210900 Carya illinoinensis HOM05D005356 ORTHO05D006596 2.4e-157 559.3 414 71.5
FvH4_7g34281 Fragaria vesca HOM05D005356 ORTHO05D006596 7.8e-156 554.3 370 75.1
Dinv17238 Davidia involucrata HOM05D005356 ORTHO05D006596 1.3e-155 553.5 415 71.1
CiPaw.06G037000 Carya illinoinensis HOM05D005356 ORTHO05D006596 3.9e-155 552.0 413 70.5
COL.COLO4_32921 Corchorus olitorius HOM05D005356 ORTHO05D006596 1.9e-154 549.7 352 77.0
RcHm_v2.0_Chr1g0384641 Rosa chinensis HOM05D005356 ORTHO05D006596 3.3e-154 548.9 389 73.0
MD07G1311300 Malus domestica HOM05D005356 ORTHO05D006596 7.3e-154 547.7 359 75.5
TAR629G3426 Trochodendron aralioides HOM05D005356 ORTHO05D006596 4.7e-153 545.0 408 69.9
Ciclev10031697m.g Citrus clementina HOM05D005356 ORTHO05D006596 6.2e-153 544.7 360 75.8
Gorai.004G255200 Gossypium raimondii HOM05D005356 ORTHO05D006596 6.2e-153 544.7 383 73.1
Gorai.007G246900 Gossypium raimondii HOM05D005356 ORTHO05D006596 1.8e-152 543.1 415 69.4
Nn1g09227 Nelumbo nucifera HOM05D005356 ORTHO05D006596 2.0e-151 539.7 372 73.1
Gohir.D11G234600 Gossypium hirsutum HOM05D005356 ORTHO05D006596 2.6e-151 539.3 415 68.9
Hma1.2p1_0419F.1_g149580 Hydrangea macrophylla HOM05D005356 ORTHO05D006596 5.8e-151 538.1 336 78.9
Gohir.A11G226000 Gossypium hirsutum HOM05D005356 ORTHO05D006596 9.8e-151 537.3 416 69.0
Gohir.A08G221634 Gossypium hirsutum HOM05D005356 ORTHO05D006596 6.4e-150 534.6 383 72.1
Hund11857 Selenicereus undatus HOM05D005356 ORTHO05D006596 9.2e-149 530.8 378 69.6
TAR375G1012 Trochodendron aralioides HOM05D005356 ORTHO05D006596 2.7e-148 529.3 402 69.7
Medtr0172s0020 Medicago truncatula HOM05D005356 ORTHO05D006596 1.1e-146 523.9 378 71.7
arahy.Tifrunner.gnm1.ann1.509DQ1 Arachis hypogaea HOM05D005356 ORTHO05D006596 1.9e-146 523.1 370 73.0
Glyma.12G013400 Glycine max HOM05D005356 ORTHO05D006596 2.5e-146 522.7 375 72.0
THA.LOC104820830 Tarenaya hassleriana HOM05D005356 ORTHO05D006596 3.3e-146 522.3 354 70.1
Lj3g0010653 Lotus japonicus HOM05D005356 ORTHO05D006596 5.6e-146 521.5 393 68.4
Phvul.011G016500 Phaseolus vulgaris HOM05D005356 ORTHO05D006596 1.2e-145 520.4 378 70.6
GSVIVG01024263001 Vitis vinifera HOM05D005356 ORTHO05D006596 2.8e-145 519.2 383 70.2
DCAR_009031 Daucus carota HOM05D005356 ORTHO05D006596 3.6e-145 518.8 346 73.4
Nn3g19190 Nelumbo nucifera HOM05D005356 ORTHO05D006596 4.7e-145 518.5 407 67.1
arahy.Tifrunner.gnm1.ann1.RW14FX Arachis hypogaea HOM05D005356 ORTHO05D006596 1.4e-144 516.9 370 72.4
Aqoxy1G01762 Aquilegia oxysepala HOM05D005356 ORTHO05D006596 1.8e-144 516.5 387 68.5
Hma1.2p1_0564F.1_g179310 Hydrangea macrophylla HOM05D005356 ORTHO05D006596 1.8e-144 516.5 406 69.5
Eucgr.A02993 Eucalyptus grandis HOM05D005356 ORTHO05D006596 8.9e-144 514.2 378 69.6
TPR.G9827 Trifolium pratense HOM05D005356 ORTHO05D006596 8.9e-144 514.2 372 70.7
CANSAT21G1742 Cannabis sativa HOM05D005356 ORTHO05D006596 1.5e-143 513.5 341 75.4
CAN.G2009.1 Capsicum annuum HOM05D005356 ORTHO05D006596 7.5e-143 511.1 412 64.1
Lalb_Chr01g0000721 Lupinus albus HOM05D005356 ORTHO05D006596 7.5e-143 511.1 386 67.6
Cc10_g12920 Coffea canephora HOM05D005356 ORTHO05D006596 9.9e-143 510.8 345 70.7
THA.LOC104802905 Tarenaya hassleriana HOM05D005356 ORTHO05D006596 1.3e-142 510.4 354 71.2
Psat0s2502g0200 Pisum sativum HOM05D005356 ORTHO05D006596 2.9e-142 509.2 367 69.8
Aqoxy3G04210 Aquilegia oxysepala HOM05D005356 ORTHO05D006596 3.7e-142 508.8 388 67.8
C02p09120 Brassica napus HOM05D005356 ORTHO05D006596 3.7e-142 508.8 351 70.9
BolC2t06824H Brassica oleracea HOM05D005356 ORTHO05D006596 6.4e-142 508.1 351 70.7
EL10Ac3g05893 Beta vulgaris HOM05D005356 ORTHO05D006596 1.1e-141 507.3 351 71.2
Peaxi162Scf00263g00323 Petunia axillaris HOM05D005356 ORTHO05D006596 1.9e-141 506.5 410 63.2
BcaC03g13524 Brassica carinata HOM05D005356 ORTHO05D006596 2.4e-141 506.1 351 70.7
A02p04240 Brassica napus HOM05D005356 ORTHO05D006596 2.4e-141 506.1 381 67.5
BraA02t05387Z Brassica rapa HOM05D005356 ORTHO05D006596 2.4e-141 506.1 381 67.5
PGR119G0933 Punica granatum HOM05D005356 ORTHO05D006596 2.4e-141 506.1 315 79.0
PGR008G0003 Punica granatum HOM05D005356 ORTHO05D006596 7.1e-141 504.6 315 78.7
PGR131G0008 Punica granatum HOM05D005356 ORTHO05D006596 7.1e-141 504.6 315 78.7
CARHR195670 Cardamine hirsuta HOM05D005356 ORTHO05D006596 9.2e-141 504.2 346 69.4
Solyc04g064720.3 Solanum lycopersicum HOM05D005356 ORTHO05D006596 9.2e-141 504.2 410 62.9
Sopen04g026680 Solanum pennellii HOM05D005356 ORTHO05D006596 9.2e-141 504.2 410 62.9
Nitab4.5_0000299g0040 Nicotiana tabacum HOM05D005356 ORTHO05D006596 1.2e-140 503.8 410 63.7
Nitab4.5_0002990g0020 Nicotiana tabacum HOM05D005356 ORTHO05D006596 1.2e-140 503.8 410 63.2
PSO782G1515 Papaver somniferum HOM05D005356 ORTHO05D006596 2.7e-140 502.7 354 70.9
Aa31LG11G12150 Aethionema arabicum HOM05D005356 ORTHO05D006596 6.0e-140 501.5 348 71.0
Oeu030531.2 Olea europaea HOM05D005356 ORTHO05D006596 1.0e-139 500.7 355 68.2
PGSC0003DMG400024812 Solanum tuberosum HOM05D005356 ORTHO05D006596 1.3e-139 500.4 410 63.2
CsaV3_2G035860 Cucumis sativus L. HOM05D005356 ORTHO05D006596 1.7e-139 500.0 357 69.5
AL6G28610 Arabidopsis lyrata HOM05D005356 ORTHO05D006596 2.3e-139 499.6 350 70.6
Sp6g26700 Schrenkiella parvula HOM05D005356 ORTHO05D006596 1.9e-138 496.5 351 69.2
MELO3C024754.2 Cucumis melo HOM05D005356 ORTHO05D006596 7.3e-138 494.6 357 68.6
Sed0019262 Sechium edule HOM05D005356 ORTHO05D006596 9.5e-138 494.2 357 68.6
AT5G17520 Arabidopsis thaliana HOM05D005356 ORTHO05D006596 1.6e-137 493.4 352 68.8
Sed0017544 Sechium edule HOM05D005356 ORTHO05D006596 8.1e-137 491.1 357 68.6
AUR62002252 Chenopodium quinoa HOM05D005356 ORTHO05D006596 2.4e-136 489.6 421 61.8
Lsat_1_v5_gn_9_47941 Lactuca sativa HOM05D005356 ORTHO05D006596 4.0e-136 488.8 350 70.3
BcaB08g36764 Brassica carinata HOM05D005356 ORTHO05D006596 6.8e-136 488.0 352 69.9
BraA10t44246Z Brassica rapa HOM05D005356 ORTHO05D006596 8.9e-136 487.6 350 70.3
MD01G1240200 Malus domestica HOM05D005356 ORTHO05D006596 2.0e-135 486.5 387 65.6
A10p21870 Brassica napus HOM05D005356 ORTHO05D006596 3.4e-135 485.7 348 69.8
BcaC04g18781 Brassica carinata HOM05D005356 ORTHO05D006596 9.9e-135 484.2 353 68.6
C09p59620 Brassica napus HOM05D005356 ORTHO05D006596 1.3e-134 483.8 353 68.8
BolC9t58801H Brassica oleracea HOM05D005356 ORTHO05D006596 1.3e-134 483.8 353 68.8
Migut.C01041 Erythranthe guttata HOM05D005356 ORTHO05D006596 1.7e-134 483.4 395 61.5
FAN03G1362 Fragaria x ananassa HOM05D005356 ORTHO05D006596 1.7e-134 483.4 352 70.7
Manes.09G130400 Manihot esculenta HOM05D005356 ORTHO05D006596 2.2e-134 483.0 410 63.7
VMungo0647G2360 Vigna mungo HOM05D005356 ORTHO05D006596 2.2e-134 483.0 305 77.0
AUR62015463 Chenopodium quinoa HOM05D005356 ORTHO05D006596 2.4e-133 479.6 411 62.0
ATR0369G003 Amborella trichopoda HOM05D005356 ORTHO05D006596 3.2e-133 479.2 343 68.5
HanXRQChr05g0139001 Helianthus annuus HOM05D005356 ORTHO05D006596 3.2e-133 479.2 344 70.3
Os04g0602400 Oryza sativa ssp. japonica HOM05D005356 ORTHO05D006596 4.6e-132 475.3 354 68.1
ECA232G1465 Erigeron canadensis HOM05D005356 ORTHO05D006596 1.3e-131 473.8 376 64.9
SalBow7G2700 Salvia bowleyana HOM05D005356 ORTHO05D006596 3.9e-131 472.2 345 65.8
Migut.N03237 Erythranthe guttata HOM05D005356 ORTHO05D006596 6.6e-131 471.5 408 60.5
MSTRG.24194 Avicennia marina HOM05D005356 ORTHO05D006596 1.5e-130 470.3 347 65.7
Actinidia33804 Actinidia chinensis HOM05D005356 ORTHO05D006596 9.6e-130 467.6 385 64.7
Oeu015013.2 Olea europaea HOM05D005356 ORTHO05D006596 1.2e-129 467.2 430 57.0
SalBow6G3313 Salvia bowleyana HOM05D005356 ORTHO05D006596 4.4e-127 458.8 341 65.4
Cpa.g.sc43.152 Carica papaya HOM05D005356 ORTHO05D006596 2.5e-122 443.0 284 77.8
Duzib177G1190 Durio zibethinus HOM05D005356 ORTHO05D006596 2.5e-122 443.0 348 70.4
Ca_19620_v3 Cicer arietinum L. HOM05D005356 ORTHO05D006596 7.3e-122 441.4 293 74.4
Gohir.D08G239900 Gossypium hirsutum HOM05D005356 ORTHO05D006596 9.6e-122 441.0 383 63.2
A10p21860 Brassica napus HOM05D005356 ORTHO05D006596 1.6e-121 440.3 321 69.8
Rhsim09G0214300 Rhododendron simsii HOM05D005356 ORTHO05D006596 2.8e-121 439.5 620 45.0
PSO063G2098 Papaver somniferum HOM05D005356 ORTHO05D006596 1.7e-118 430.3 315 70.5
MSTRG.22381 Avicennia marina HOM05D005356 ORTHO05D006596 4.9e-118 428.7 347 59.9
Haze_00348 Corylus avellana HOM05D005356 ORTHO05D006596 4.2e-117 425.6 361 65.9
Lj3A883T53 Lonicera japonica HOM05D005356 ORTHO05D006596 5.4e-117 425.2 281 76.9
unitig_744.g24563 Utricularia gibba HOM05D005356 ORTHO05D006596 4.6e-116 422.2 339 61.1
SEGI_37553 Sequoiadendron giganteum HOM05D005356 ORTHO05D006596 7.4e-114 414.8 324 63.3
SGA_v2.0_scaffold19G08642 Striga asiatica HOM05D005356 ORTHO05D006596 1.4e-112 410.6 361 59.3
Carub.0006s1575 Capsella rubella HOM05D005356 ORTHO05D006596 1.9e-106 390.2 261 71.6
ClCG02G007870 Citrullus lanatus HOM05D005356 ORTHO05D006596 4.8e-105 385.6 299 65.6
MBI04_g30781_MAGBIO Magnolia biondii HOM05D005356 ORTHO05D006596 5.5e-93 345.5 251 71.3
Pp3c6_18710 Physcomitrium patens HOM05D005356 ORTHO05D006596 1.6e-92 344.0 340 51.2
CDE11G1065 Ceratophyllum demersum HOM05D005356 ORTHO05D006596 2.1e-92 343.6 353 52.7
Mapoly0051s0014 Marchantia polymorpha HOM05D005356 ORTHO05D006596 3.9e-91 339.3 327 52.0
Pp3c24_890 Physcomitrium patens HOM05D005356 ORTHO05D006596 3.3e-90 336.3 327 52.3
CANSAT21G0168 Cannabis sativa HOM05D005356 ORTHO05D006596 7.4e-90 335.1 218 75.7
SMO012G0030 Selaginella moellendorffii HOM05D005356 ORTHO05D006596 4.8e-89 332.4 329 51.1
AagrBONN_evm.TU.Sc2ySwM_228.477 Anthoceros agrestis HOM05D005356 ORTHO05D006596 1.4e-88 330.9 314 53.2
HPP92_022764 Vanilla planifolia HOM05D005356 ORTHO05D006596 3.6e-84 316.2 220 64.5
Sopen04g026690 Solanum pennellii HOM05D005356 ORTHO05D006596 1.8e-83 313.9 288 57.6
vmacro22188 Vaccinium macrocarpon HOM05D005356 ORTHO05D006596 2.4e-80 303.5 642 34.4
CSS0033101 Camellia sinensis var. sinensis HOM05D005356 ORTHO05D006596 5.3e-80 302.4 211 74.9
CANSAT21G1370 Cannabis sativa HOM05D005356 ORTHO05D006596 5.0e-78 295.8 173 82.7
Sc03g0005650 Simmondsia chinensis HOM05D005356 ORTHO05D006596 2.3e-75 287.0 260 62.7
SMO118G0252 Selaginella moellendorffii HOM05D005356 ORTHO05D006596 2.2e-73 280.4 266 54.9
Zm00001eb071770 Zea mays HOM05D005356 ORTHO05D006596 3.3e-66 256.5 190 68.4
Pp3c23_14070 Physcomitrium patens HOM05D005356 ORTHO05D006596 7.0e-64 248.8 245 52.2
Actinidia04557 Actinidia chinensis HOM05D005356 ORTHO05D006596 1.7e-57 227.6 224 57.6
Thhalv10016106m.g Eutrema salsugineum HOM05D005356 ORTHO05D006596 7.0e-48 195.7 117 72.6
AT5G17523 Arabidopsis thaliana HOM05D005356 ORTHO05D006596 1.0e-46 191.8 160 63.8
MCO10G093 Micromonas commoda HOM05D005356 ORTHO05D006596 2.7e-39 167.2 307 34.5
Pp3c24_840 Physcomitrium patens HOM05D005356 ORTHO05D006596 2.7e-39 167.2 148 54.1
Glyma.09G223400 Glycine max HOM05D005356 ORTHO05D006596 1.9e-37 161.0 93 77.4
Cre12.g486600 Chlamydomonas reinhardtii HOM05D005356 ORTHO05D006596 3.4e-34 150.2 307 31.3
CSS0037967 Camellia sinensis var. sinensis HOM05D005356 ORTHO05D006596 6.4e-33 146.0 75 90.7
PRCOL_00004977 Prasinoderma coloniale HOM05D005356 ORTHO05D006596 1.6e-28 131.3 292 32.2
CBR_g17686 Chara braunii HOM05D005356 ORTHO05D006596 1.6e-23 114.8 97 51.5
Zm00001eb003380 Zea mays HOM05D001522 ORTHO05D001547 2.4e-19 100.9 78 69.2
CBR_g17688 Chara braunii HOM05D005356 ORTHO05D006596 2.1e-15 87.8 104 43.3
Pp3c21_10850 Physcomitrium patens HOM05D005356 ORTHO05D310352 2.4e-11 74.3 184 26.6
HPP92_022763 Vanilla planifolia HOM05D005356 ORTHO05D006596 5.3e-11 73.2 47 68.1


User provided reference genes

Program Settings