Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 2.1e-186 655.6 349 100.0
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 1.9e-105 386.7 238 87.8
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 1.3e-98 364.0 239 83.7
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 1.6e-93 347.1 239 80.3
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 5.8e-59 232.3 245 58.4
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 2.8e-53 213.4 240 55.4
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 4.8e-53 212.6 250 55.2
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 1.8e-52 210.7 246 55.3
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 2.0e-51 207.2 243 54.3
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 2.8e-45 186.8 243 51.9
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 6.5e-42 175.6 251 47.0
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 1.1e-41 174.9 245 50.2
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 2.5e-41 173.7 243 49.4
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 7.2e-41 172.2 240 49.2
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 5.1e-39 166.0 252 48.0
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 8.8e-39 165.2 249 46.6
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 1.3e-37 161.4 252 48.8
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 2.8e-37 160.2 244 47.1
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 2.4e-36 157.1 259 44.0
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 9.1e-36 155.2 243 46.9
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 1.7e-34 151.0 243 46.1
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 1.7e-34 151.0 247 42.9
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 6.5e-34 149.1 241 44.8
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 7.2e-33 145.6 241 44.0
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 8.0e-32 142.1 249 44.6
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 1.5e-30 137.9 253 41.5
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 2.2e-29 134.0 245 44.1
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 2.8e-29 133.7 249 45.4
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 3.7e-29 133.3 259 39.4
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 8.2e-29 132.1 259 42.1
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 1.1e-28 131.7 237 42.2
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 2.4e-28 130.6 240 45.8
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 9.1e-28 128.6 254 40.9
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 1.6e-27 127.9 249 43.8
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 3.5e-27 126.7 261 37.9
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 3.5e-27 126.7 251 40.6
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 4.5e-27 126.3 265 40.0
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 1.0e-26 125.2 245 42.9
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 1.0e-26 125.2 240 44.6
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 1.0e-26 125.2 249 45.0
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 3.8e-26 123.2 255 41.6
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 5.0e-26 122.9 249 40.2
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 1.5e-25 121.3 248 39.5
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 2.5e-25 120.6 258 41.1
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 4.2e-25 119.8 232 41.8
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 7.2e-25 119.0 242 40.5
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 7.2e-25 119.0 242 40.5
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 7.2e-25 119.0 242 40.5
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 2.1e-24 117.5 242 40.5
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 2.7e-24 117.1 243 40.3
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 8.0e-24 115.5 223 46.2
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 4.0e-23 113.2 244 45.1
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 8.8e-23 112.1 240 43.8
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 2.0e-22 110.9 249 38.6
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 2.6e-22 110.5 246 38.6
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 4.4e-22 109.8 242 40.1
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 7.5e-22 109.0 256 36.3
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 7.5e-22 109.0 217 42.9
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 1.3e-21 108.2 249 42.2
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 1.7e-21 107.8 250 36.4
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 4.8e-21 106.3 265 38.1
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 6.3e-21 105.9 251 37.1
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 1.4e-20 104.8 239 40.2
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 1.8e-20 104.4 239 40.2
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 3.1e-20 103.6 242 38.0
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 4.1e-20 103.2 172 44.2
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 5.3e-20 102.8 206 41.3
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 1.2e-19 101.7 245 38.4
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 5.9e-19 99.4 242 40.1
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 5.9e-19 99.4 263 37.3
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 7.7e-19 99.0 182 42.3
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 7.7e-19 99.0 182 43.4
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 7.7e-19 99.0 173 46.8
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 3.8e-18 96.7 249 38.2
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 5.0e-18 96.3 241 39.8
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 1.9e-17 94.4 252 34.5
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 2.5e-17 94.0 262 34.7
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 1.2e-16 91.7 174 44.3
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 2.1e-16 90.9 238 37.4
C08p29830 Brassica napus HOM05D007603 ORTHO05D009604 2.7e-16 90.5 175 41.7
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 3.6e-16 90.1 193 42.0
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 4.7e-16 89.7 264 35.6
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 8.0e-16 89.0 244 37.3
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 1.0e-15 88.6 182 41.8
BolC8t50594H Brassica oleracea HOM05D007603 ORTHO05D009604 9.8e-14 82.0 175 40.6
Hund01003 Selenicereus undatus HOM05D007603 ORTHO05D009604 6.3e-13 79.3 254 33.1
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 9.1e-12 75.5 175 39.4
AUR62036075 Chenopodium quinoa HOM05D007603 ORTHO05D009604 2.7e-11 73.9 126 39.7
AUR62043430 Chenopodium quinoa HOM05D007603 ORTHO05D009604 3.8e-10 70.1 132 40.2
Hund07856 Selenicereus undatus HOM05D007603 ORTHO05D009604 6.5e-10 69.3 105 44.8
FAN09G3062 Fragaria x ananassa HOM05D007603 ORTHO05D009604 8.6e-10 68.9 137 38.7
Rhsim06G0135700 Rhododendron simsii HOM05D007603 ORTHO05D009604 2.3e-07 60.8 111 43.2
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 8.9e-07 58.9 243 30.5
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 2.0e-06 57.8 250 30.4


User provided reference genes

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