Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0051600 Salix brachista HOM05D007032 ORTHO05D008777 8.4e-213 743.4 378 100.0
Potri.013G058100 Populus trichocarpa HOM05D007032 ORTHO05D008777 7.0e-151 537.7 380 77.4
Potri.019G035100 Populus trichocarpa HOM05D007032 ORTHO05D008777 1.9e-127 459.9 383 69.2
Sabra19G0042800 Salix brachista HOM05D007032 ORTHO05D008777 6.2e-123 444.9 380 67.4
Manes.09G141200 Manihot esculenta HOM05D007032 ORTHO05D008777 2.0e-113 413.3 386 62.7
COL.COLO4_13594 Corchorus olitorius HOM05D007032 ORTHO05D008777 5.9e-97 358.6 379 55.1
Cfa016444 Carpinus fangiana HOM05D007032 ORTHO05D008777 6.5e-96 355.1 378 55.3
TWI34G0430 Tripterygium wilfordii HOM05D007032 ORTHO05D008777 1.0e-93 347.8 379 54.6
RcHm_v2.0_Chr3g0497071 Rosa chinensis HOM05D007032 ORTHO05D008777 1.8e-93 347.1 310 61.6
Haze_19421 Corylus avellana HOM05D007032 ORTHO05D008777 2.3e-93 346.7 378 54.8
Prupe.7G004300 Prunus persica HOM05D007032 ORTHO05D008777 2.5e-92 343.2 375 54.4
Thecc.05G294800 Theobroma cacao HOM05D007032 ORTHO05D008777 3.3e-92 342.8 384 53.9
MD12G1003800 Malus domestica HOM05D007032 ORTHO05D008777 7.4e-92 341.7 378 54.0
Cpa.g.sc51.117 Carica papaya HOM05D007032 ORTHO05D008777 2.2e-91 340.1 382 56.3
Dinv37016 Davidia involucrata HOM05D007032 ORTHO05D008777 1.2e-89 334.3 382 53.1
Eucgr.K01499 Eucalyptus grandis HOM05D007032 ORTHO05D008777 1.2e-89 334.3 381 53.3
Gohir.D13G177900 Gossypium hirsutum HOM05D007032 ORTHO05D008777 1.1e-87 327.8 382 52.4
GSVIVG01033405001 Vitis vinifera HOM05D007032 ORTHO05D008777 4.2e-87 325.9 311 59.5
Gohir.A13G172000 Gossypium hirsutum HOM05D007032 ORTHO05D008777 2.1e-86 323.6 382 52.1
Sabra19G0045100 Salix brachista HOM05D007032 ORTHO05D008777 4.6e-86 322.4 207 79.7
CiPaw.10G001100 Carya illinoinensis HOM05D007032 ORTHO05D008777 1.0e-85 321.2 305 58.0
QL07p019479 Quercus lobata HOM05D007032 ORTHO05D008777 1.8e-85 320.5 270 63.7
TAR623G0513 Trochodendron aralioides HOM05D007032 ORTHO05D008777 1.1e-84 317.8 381 52.0
CSS0032159 Camellia sinensis var. sinensis HOM05D007032 ORTHO05D008777 3.3e-84 316.2 379 51.2
Duzib177G0078 Durio zibethinus HOM05D007032 ORTHO05D008777 1.3e-83 314.3 380 51.8
Duzib177G0665 Durio zibethinus HOM05D007032 ORTHO05D008777 1.3e-83 314.3 380 51.8
PGR142G4364 Punica granatum HOM05D007032 ORTHO05D008777 4.8e-83 312.4 350 52.6
Gorai.013G203200 Gossypium raimondii HOM05D007032 ORTHO05D008777 1.8e-82 310.5 382 51.0
Lalb_Chr22g0359131 Lupinus albus HOM05D007032 ORTHO05D008777 1.2e-81 307.8 376 50.5
Ca_08264_v3 Cicer arietinum L. HOM05D007032 ORTHO05D008777 2.0e-81 307.0 305 56.1
MELO3C026886.2 Cucumis melo HOM05D007032 ORTHO05D008777 2.6e-81 306.6 373 48.3
Glyma.19G112100 Glycine max HOM05D007032 ORTHO05D008777 1.3e-80 304.3 375 51.5
ClCG10G013370 Citrullus lanatus HOM05D007032 ORTHO05D008777 3.8e-80 302.8 395 47.3
FvH4_1g28130 Fragaria vesca HOM05D007032 ORTHO05D008777 3.8e-80 302.8 304 56.6
Atru.chr2.1383 Acer truncatum HOM05D007032 ORTHO05D008777 5.0e-80 302.4 227 68.7
Actinidia17303 Actinidia chinensis HOM05D007032 ORTHO05D008777 1.1e-79 301.2 307 53.7
CsaV3_3G043260 Cucumis sativus L. HOM05D007032 ORTHO05D008777 7.2e-79 298.5 378 46.3
FAN19G2553 Fragaria x ananassa HOM05D007032 ORTHO05D008777 1.0e-77 294.7 320 54.4
CANSAT78G2258 Cannabis sativa HOM05D007032 ORTHO05D008777 1.4e-77 294.3 303 55.1
VMungo1383G0477 Vigna mungo HOM05D007032 ORTHO05D008777 1.4e-77 294.3 311 55.0
Lj1g0006283 Lotus japonicus HOM05D007032 ORTHO05D008777 1.8e-77 293.9 310 56.1
PGSC0003DMG400008355 Solanum tuberosum HOM05D007032 ORTHO05D008777 5.2e-77 292.4 312 51.9
Sopen10g029210 Solanum pennellii HOM05D007032 ORTHO05D008777 6.7e-77 292.0 315 51.7
arahy.Tifrunner.gnm1.ann1.U2PEBB Arachis hypogaea HOM05D007032 ORTHO05D008777 8.8e-77 291.6 302 55.0
Phvul.001G110800 Phaseolus vulgaris HOM05D007032 ORTHO05D008777 1.1e-76 291.2 320 54.4
FAN26G0126 Fragaria x ananassa HOM05D007032 ORTHO05D008777 2.6e-76 290.0 311 54.3
Solyc10g078560.3 Solanum lycopersicum HOM05D007032 ORTHO05D008777 3.3e-76 289.7 312 51.6
Nitab4.5_0002769g0070 Nicotiana tabacum HOM05D007032 ORTHO05D008777 5.7e-76 288.9 383 47.0
Sed0015080 Sechium edule HOM05D007032 ORTHO05D008777 5.7e-76 288.9 379 48.3
Aqoxy1G00484 Aquilegia oxysepala HOM05D007032 ORTHO05D008777 2.8e-75 286.6 311 52.4
FAN28G1183 Fragaria x ananassa HOM05D007032 ORTHO05D008777 4.8e-75 285.8 342 50.3
Nn7g35853 Nelumbo nucifera HOM05D007032 ORTHO05D008777 8.2e-75 285.0 330 50.9
Medtr7g085600 Medicago truncatula HOM05D007032 ORTHO05D008777 5.3e-74 282.3 299 52.8
AT5G18140 Arabidopsis thaliana HOM05D007032 ORTHO05D008777 7.0e-74 282.0 382 46.3
Ciclev10021147m.g Citrus clementina HOM05D007032 ORTHO05D008777 9.1e-74 281.6 378 48.7
Peaxi162Scf00463g00017 Petunia axillaris HOM05D007032 ORTHO05D008777 9.1e-74 281.6 313 52.1
TPR.G5887 Trifolium pratense HOM05D007032 ORTHO05D008777 4.5e-73 279.3 297 53.5
THA.LOC104820772 Tarenaya hassleriana HOM05D007032 ORTHO05D008777 1.0e-72 278.1 386 47.7
Sc23g0006440 Simmondsia chinensis HOM05D007032 ORTHO05D008777 2.9e-72 276.6 305 51.8
Cc06_g22990 Coffea canephora HOM05D007032 ORTHO05D008777 3.8e-72 276.2 304 51.6
CAN.G960.47 Capsicum annuum HOM05D007032 ORTHO05D008777 6.5e-72 275.4 312 50.6
Nitab4.5_0004844g0030 Nicotiana tabacum HOM05D007032 ORTHO05D008777 1.5e-71 274.2 314 50.6
Carub.0006s1643 Capsella rubella HOM05D007032 ORTHO05D008777 4.2e-71 272.7 308 50.3
Sp6g26170 Schrenkiella parvula HOM05D007032 ORTHO05D008777 9.4e-71 271.6 396 44.7
Thhalv10014046m.g Eutrema salsugineum HOM05D007032 ORTHO05D008777 2.1e-70 270.4 392 44.6
vmacro09138 Vaccinium macrocarpon HOM05D007032 ORTHO05D008777 2.1e-70 270.4 337 48.4
DCAR_017051 Daucus carota HOM05D007032 ORTHO05D008777 4.7e-70 269.2 303 48.2
BolC9t58727H Brassica oleracea HOM05D007032 ORTHO05D008777 8.0e-70 268.5 310 48.4
MBI04_g38346_MAGBIO Magnolia biondii HOM05D007032 ORTHO05D008777 8.0e-70 268.5 315 50.5
BcaB08g36702 Brassica carinata HOM05D007032 ORTHO05D008777 2.0e-68 263.8 387 45.5
ECA233G0049 Erigeron canadensis HOM05D007032 ORTHO05D008777 2.0e-68 263.8 371 44.5
A10p21360 Brassica napus HOM05D007032 ORTHO05D008777 3.3e-68 263.1 307 49.2
BraA10t44199Z Brassica rapa HOM05D007032 ORTHO05D008777 3.3e-68 263.1 307 49.2
arahy.Tifrunner.gnm1.ann1.TEV0AS Arachis hypogaea HOM05D007032 ORTHO05D008777 4.4e-68 262.7 290 52.4
Psat0s1971g0040 Pisum sativum HOM05D007032 ORTHO05D008777 5.7e-68 262.3 306 51.3
Aa31LG11G11460 Aethionema arabicum HOM05D007032 ORTHO05D008777 2.8e-67 260.0 388 42.8
AL6G29340 Arabidopsis lyrata HOM05D007032 ORTHO05D008777 1.1e-66 258.1 383 46.0
EL10Ac3g06823 Beta vulgaris HOM05D007032 ORTHO05D008777 1.4e-66 257.7 326 47.2
C09p58830 Brassica napus HOM05D007032 ORTHO05D008777 1.4e-66 257.7 314 47.1
CDE10G0774 Ceratophyllum demersum HOM05D007032 ORTHO05D008777 3.5e-65 253.1 301 47.8
MSTRG.26067 Avicennia marina HOM05D007032 ORTHO05D008777 1.0e-64 251.5 311 48.9
PSO339G2173 Papaver somniferum HOM05D007032 ORTHO05D008777 6.5e-64 248.8 364 44.0
Lsat_1_v5_gn_6_37021 Lactuca sativa HOM05D007032 ORTHO05D008777 7.2e-63 245.4 385 42.6
AUR62032696 Chenopodium quinoa HOM05D007032 ORTHO05D008777 1.4e-58 231.1 229 53.3
Atru.chr2.1387 Acer truncatum HOM05D007032 ORTHO05D008777 5.4e-58 229.2 250 52.8
Oeu024503.1 Olea europaea HOM05D007032 ORTHO05D008777 5.4e-58 229.2 206 58.7
SalBow1G8415 Salvia bowleyana HOM05D007032 ORTHO05D008777 2.0e-57 227.3 313 46.0
Migut.K00006 Erythranthe guttata HOM05D007032 ORTHO05D008777 3.5e-57 226.5 313 45.0
Actinidia38613 Actinidia chinensis HOM05D007032 ORTHO05D008777 5.9e-57 225.7 274 46.7
SGA_v2.0_scaffold94G28401 Striga asiatica HOM05D007032 ORTHO05D008777 1.1e-55 221.5 310 45.2
Ah.04g153180 Amaranthus hybridus HOM05D002059 ORTHO05D002210 6.1e-54 215.7 311 44.1
ATR0737G130 Amborella trichopoda HOM05D007032 ORTHO05D008777 3.0e-53 213.4 305 43.6
CARHR194930 Cardamine hirsuta HOM05D007032 ORTHO05D008777 7.8e-49 198.7 208 53.8
HPP92_018484 Vanilla planifolia HOM05D007032 ORTHO05D008777 1.0e-48 198.4 300 42.0
HPP92_018478 Vanilla planifolia HOM05D007032 ORTHO05D008777 1.3e-48 198.0 299 42.1
HanXRQChr02g0054241 Helianthus annuus HOM05D007032 ORTHO05D008777 3.4e-44 183.3 205 51.7
SEGI_34502 Sequoiadendron giganteum HOM05D007032 ORTHO05D008777 2.2e-43 180.6 306 37.3
CDE10G1270 Ceratophyllum demersum HOM05D007032 ORTHO05D008777 2.8e-38 163.7 301 37.5
Nitab4.5_0000394g0040 Nicotiana tabacum HOM05D007032 ORTHO05D008777 8.4e-19 99.0 100 61.0
Nitab4.5_0000394g0030 Nicotiana tabacum HOM05D007032 ORTHO05D008777 4.1e-18 96.7 175 34.9
C08p30760 Brassica napus HOM05D004126 ORTHO05D004818 6.0e-17 92.8 144 38.9
Pp3c25_13250 Physcomitrium patens HOM05D007032 ORTHO05D008777 1.1e-15 88.6 328 25.9
Glyma.16G041000 Glycine max HOM05D007032 ORTHO05D008777 1.5e-15 88.2 160 35.6
SMO111G0210 Selaginella moellendorffii HOM05D007032 ORTHO05D008777 8.1e-14 82.4 317 24.9
Pp3c6_3480 Physcomitrium patens HOM05D007032 ORTHO05D008777 2.4e-13 80.9 326 24.2
AUR62032051 Chenopodium quinoa HOM05D007032 ORTHO05D008777 9.0e-13 79.0 84 42.9
Nitab4.5_0000626g0040 Nicotiana tabacum HOM05D007032 ORTHO05D008777 5.8e-12 76.3 131 42.0
Haze_18900 Corylus avellana HOM05D000367 ORTHO05D001438 5.6e-07 59.7 122 35.2
FAN09G1569 Fragaria x ananassa HOM05D000367 ORTHO05D001438 9.6e-07 58.9 180 28.3
arahy.Tifrunner.gnm1.ann1.HU2JKE Arachis hypogaea HOM05D000367 ORTHO05D001438 1.3e-06 58.5 110 38.2
BcaC07g39869 Brassica carinata HOM05D007032 ORTHO05D008777 1.6e-06 58.2 110 35.5
Rhsim12G0190700 Rhododendron simsii HOM05D000367 ORTHO05D001438 4.8e-06 56.6 171 29.2
Thhalv10025198m.g Eutrema salsugineum HOM05D000367 ORTHO05D001438 6.2e-06 56.2 112 33.9
Sp7g35910 Schrenkiella parvula HOM05D000367 ORTHO05D001438 6.2e-06 56.2 112 33.9
ECA234G2864 Erigeron canadensis HOM05D000367 ORTHO05D001438 8.1e-06 55.8 173 30.1


User provided reference genes

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