Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0039900 Salix brachista HOM05D007517 ORTHO05D006922 3.9e-60 234.6 116 100.0
Sabra13G0040000 Salix brachista HOM05D007517 ORTHO05D006922 4.3e-51 204.5 105 95.2
Sabra13G0040100 Salix brachista HOM05D007517 ORTHO05D006922 4.3e-51 204.5 105 95.2
Sabra13G0040200 Salix brachista HOM05D007517 ORTHO05D006922 4.3e-51 204.5 105 95.2
Sabra13G0040300 Salix brachista HOM05D007517 ORTHO05D006922 4.3e-51 204.5 105 95.2
Potri.013G043600 Populus trichocarpa HOM05D007517 ORTHO05D006922 1.3e-42 176.4 117 76.9
Potri.019G013000 Populus trichocarpa HOM05D007517 ORTHO05D006922 1.3e-39 166.4 117 71.8
Potri.019G012400 Populus trichocarpa HOM05D007517 ORTHO05D006922 8.5e-39 163.7 118 71.2
Potri.019G012700 Populus trichocarpa HOM05D007517 ORTHO05D006922 5.5e-38 161.0 117 69.2
Potri.019G012601 Populus trichocarpa HOM05D007517 ORTHO05D006922 1.7e-34 149.4 117 66.7
Potri.019G012900 Populus trichocarpa HOM05D007517 ORTHO05D006922 1.7e-34 149.4 117 66.7
Potri.019G012702 Populus trichocarpa HOM05D007517 ORTHO05D006922 6.3e-34 147.5 117 65.8
Sabra19G0017100 Salix brachista HOM05D007517 ORTHO05D006922 3.8e-31 138.3 118 62.7
Sabra19G0026100 Salix brachista HOM05D007517 ORTHO05D006922 3.8e-31 138.3 118 62.7
Sabra19G0025700 Salix brachista HOM05D007517 ORTHO05D006922 1.1e-30 136.7 118 61.9
Sabra19G0025500 Salix brachista HOM05D007517 ORTHO05D006922 7.2e-30 134.0 117 60.7
Sabra19G0017300 Salix brachista HOM05D007517 ORTHO05D006922 9.4e-30 133.7 118 60.2
Sabra19G0025300 Salix brachista HOM05D007517 ORTHO05D006922 3.6e-29 131.7 104 62.5
Sabra19G0017200 Salix brachista HOM05D007517 ORTHO05D006922 2.8e-26 122.1 103 60.2
Sabra19G0026000 Salix brachista HOM05D007517 ORTHO05D006922 9.1e-25 117.1 98 59.2
Potri.019G012603 Populus trichocarpa HOM05D007517 ORTHO05D006922 2.9e-23 112.1 118 55.9
Rhsim05G0176100 Rhododendron simsii HOM05D007517 ORTHO05D006922 1.2e-16 90.1 109 46.8
Dinv44645 Davidia involucrata HOM05D007517 ORTHO05D006922 4.5e-16 88.2 120 40.0
Dinv05722 Davidia involucrata HOM05D003159 ORTHO05D003780 1.0e-15 87.0 90 56.7
Thecc.01G263600 Theobroma cacao HOM05D007517 ORTHO05D006922 3.8e-15 85.1 105 46.7
Cpa.g.sc162.5 Carica papaya HOM05D007517 ORTHO05D006922 1.5e-14 83.2 107 46.7
Dinv30121 Davidia involucrata HOM05D007517 ORTHO05D006922 1.5e-14 83.2 93 54.8
Rhsim05G0177900 Rhododendron simsii HOM05D007517 ORTHO05D006922 4.2e-14 81.6 110 45.5
Potri.010G075133 Populus trichocarpa HOM05D007517 ORTHO05D006922 5.5e-14 81.3 102 44.1
Duzib133G0625 Durio zibethinus HOM05D007517 ORTHO05D006922 7.2e-14 80.9 110 44.5
Atru.chr5.1625 Acer truncatum HOM05D007517 ORTHO05D006922 9.4e-14 80.5 97 44.3
Aqoxy5G00299 Aquilegia oxysepala HOM05D007517 ORTHO05D006922 1.2e-13 80.1 98 44.9
Lj1g0011629 Lotus japonicus HOM05D007517 ORTHO05D006922 3.6e-13 78.6 105 43.8
COL.COLO4_15407 Corchorus olitorius HOM05D007517 ORTHO05D006922 4.7e-13 78.2 92 50.0
Lalb_Chr21g0311071 Lupinus albus HOM05D007517 ORTHO05D006922 8.0e-13 77.4 95 45.3
Sabra08G0124500 Salix brachista HOM05D007517 ORTHO05D006922 5.2e-12 74.7 104 41.3
Glyma.03G248900 Glycine max HOM05D007517 ORTHO05D006922 8.8e-12 73.9 102 42.2
Glyma.19G246500 Glycine max HOM05D007517 ORTHO05D006922 8.8e-12 73.9 105 41.0
Duzib138G0038 Durio zibethinus HOM05D007517 ORTHO05D006922 5.7e-11 71.2 106 40.6
Gorai.004G073800 Gossypium raimondii HOM05D007517 ORTHO05D006922 5.7e-11 71.2 103 39.8
Gohir.A08G060866 Gossypium hirsutum HOM05D007517 ORTHO05D006922 1.3e-10 70.1 90 43.3
Potri.008G163000 Populus trichocarpa HOM05D007517 ORTHO05D006922 1.3e-10 70.1 104 41.3
TWI12G0979 Tripterygium wilfordii HOM05D007517 ORTHO05D006922 1.3e-10 70.1 84 45.2
ClCG07G000800 Citrullus lanatus HOM05D007517 ORTHO05D006922 1.7e-10 69.7 107 40.2
Gohir.D08G070066 Gossypium hirsutum HOM05D007517 ORTHO05D006922 1.7e-10 69.7 103 39.8
Phvul.006G103600 Phaseolus vulgaris HOM05D007517 ORTHO05D006922 1.7e-10 69.7 81 44.4
Duzib212G0013 Durio zibethinus HOM05D007517 ORTHO05D006922 2.2e-10 69.3 98 40.8
Gohir.D11G134500 Gossypium hirsutum HOM05D007517 ORTHO05D006922 2.2e-10 69.3 88 45.5
Gorai.007G143900 Gossypium raimondii HOM05D007517 ORTHO05D006922 2.2e-10 69.3 88 45.5
Gohir.A11G128700 Gossypium hirsutum HOM05D007517 ORTHO05D006922 2.8e-10 68.9 88 46.6
Oeu016033.1 Olea europaea HOM05D014319 ORTHO05D006922 4.8e-10 68.2 115 41.7
Atru.chr2.873 Acer truncatum HOM05D007517 ORTHO05D006922 6.3e-10 67.8 89 42.7
Potri.008G162900 Populus trichocarpa HOM05D007517 ORTHO05D006922 1.1e-09 67.0 106 41.5
QL10p016305 Quercus lobata HOM05D007517 ORTHO05D006922 1.1e-09 67.0 64 53.1
Haze_24578 Corylus avellana HOM05D007517 ORTHO05D006922 1.4e-09 66.6 67 55.2
QL10p016326 Quercus lobata HOM05D007517 ORTHO05D006922 1.4e-09 66.6 64 51.6
QL10p016371 Quercus lobata HOM05D007517 ORTHO05D006922 1.8e-09 66.2 64 51.6
QL10p016395 Quercus lobata HOM05D007517 ORTHO05D006922 2.4e-09 65.9 64 50.0
Cfa002378 Carpinus fangiana HOM05D007517 ORTHO05D006922 3.1e-09 65.5 67 52.2
Gorai.013G186200 Gossypium raimondii HOM05D007517 ORTHO05D006922 4.1e-09 65.1 99 42.4
Gohir.A13G169025 Gossypium hirsutum HOM05D007517 ORTHO05D006922 9.1e-09 63.9 85 44.7
FvH4_6g02480 Fragaria vesca HOM05D017677 ORTHO05D006922 1.6e-08 63.2 116 34.5
FAN05G1682 Fragaria x ananassa HOM05D017677 ORTHO05D006922 1.6e-08 63.2 117 35.0
FAN05G2017 Fragaria x ananassa HOM05D017677 ORTHO05D006922 1.6e-08 63.2 117 35.0
FAN14G2793 Fragaria x ananassa HOM05D017677 ORTHO05D006922 1.6e-08 63.2 116 34.5
Thecc.05G277600 Theobroma cacao HOM05D007517 ORTHO05D006922 1.6e-08 63.2 80 48.8
Atru.chr4.2195 Acer truncatum HOM05D007517 ORTHO05D006922 2.7e-08 62.4 60 50.0
FAN02G2589 Fragaria x ananassa HOM05D017677 ORTHO05D006922 4.5e-08 61.6 116 34.5
FAN09G4351 Fragaria x ananassa HOM05D017677 ORTHO05D006922 4.5e-08 61.6 117 35.0
FAN14G4694 Fragaria x ananassa HOM05D017677 ORTHO05D006922 5.9e-08 61.2 112 34.8
Atru.chr2.874 Acer truncatum HOM05D007517 ORTHO05D006922 8.6e-07 57.4 62 50.0
Potri.008G160650 Populus trichocarpa HOM05D007517 ORTHO05D006922 8.6e-07 57.4 104 39.4
Atru.chr2.879 Acer truncatum HOM05D007517 ORTHO05D006922 1.1e-06 57.0 67 47.8
Gohir.A09G113250 Gossypium hirsutum HOM05D013101 ORTHO05D006922 2.5e-06 55.8 108 35.2
Glyma.10G164000 Glycine max HOM05D007517 ORTHO05D006922 4.2e-06 55.1 79 45.6
Nn3g19570 Nelumbo nucifera HOM05D013994 ORTHO05D008195 4.2e-06 55.1 103 38.8
Potri.008G163100 Populus trichocarpa HOM05D007517 ORTHO05D006922 7.2e-06 54.3 104 38.5
CiPaw.03G260800 Carya illinoinensis HOM05D007517 ORTHO05D006922 9.5e-06 53.9 91 37.4


User provided reference genes

Program Settings