Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0035600 Salix brachista HOM05D006905 ORTHO05D003398 5.0e-218 760.8 372 100.0
Potri.013G036500 Populus trichocarpa HOM05D006905 ORTHO05D003398 3.8e-72 276.2 372 47.8
Manes.09G156000 Manihot esculenta HOM05D006905 ORTHO05D003398 2.7e-46 190.3 368 37.5
Duzib128G0775 Durio zibethinus HOM05D006905 ORTHO05D003398 5.7e-44 182.6 373 37.8
Ciclev10002392m.g Citrus clementina HOM05D006905 ORTHO05D003398 2.4e-42 177.2 346 36.7
Cpa.g.sc117.65 Carica papaya HOM05D006905 ORTHO05D003398 1.5e-41 174.5 367 36.5
Cfa006463 Carpinus fangiana HOM05D006905 ORTHO05D003398 4.5e-41 172.9 373 36.2
Gorai.004G263200 Gossypium raimondii HOM05D006905 ORTHO05D003398 1.7e-40 171.0 388 35.3
Dinv11554 Davidia involucrata HOM05D006905 ORTHO05D003398 8.5e-40 168.7 368 35.9
Gohir.D08G246700 Gossypium hirsutum HOM05D006905 ORTHO05D003398 8.5e-40 168.7 388 34.5
GSVIVG01021847001 Vitis vinifera HOM05D006905 ORTHO05D003398 8.5e-40 168.7 369 36.0
TWI56G1496 Tripterygium wilfordii HOM05D006905 ORTHO05D003398 1.4e-39 167.9 364 35.7
Thecc.05G193600 Theobroma cacao HOM05D006905 ORTHO05D003398 7.2e-39 165.6 349 37.0
RcHm_v2.0_Chr3g0451941 Rosa chinensis HOM05D006905 ORTHO05D003398 1.8e-37 161.0 371 35.0
Prupe.6G339800 Prunus persica HOM05D006905 ORTHO05D003398 2.3e-37 160.6 372 34.9
vmacro05070 Vaccinium macrocarpon HOM05D006905 ORTHO05D003398 3.0e-37 160.2 375 32.3
CANSAT54G0047 Cannabis sativa HOM05D006905 ORTHO05D003398 3.9e-37 159.8 351 34.8
COL.COLO4_38037 Corchorus olitorius HOM05D006905 ORTHO05D003398 8.7e-37 158.7 371 34.2
QL03p024500 Quercus lobata HOM05D006905 ORTHO05D003398 8.7e-37 158.7 363 34.7
FvH4_6g03440 Fragaria vesca HOM05D006905 ORTHO05D003398 1.9e-36 157.5 363 33.9
MD04G1220800 Malus domestica HOM05D006905 ORTHO05D003398 3.3e-36 156.8 368 34.0
FAN05G2111 Fragaria x ananassa HOM05D006905 ORTHO05D003398 5.7e-36 156.0 363 33.3
CiPaw.07G006400 Carya illinoinensis HOM05D006905 ORTHO05D003398 9.7e-36 155.2 340 35.6
TAR636G1711 Trochodendron aralioides HOM05D006905 ORTHO05D003398 9.7e-36 155.2 373 34.9
FAN02G2898 Fragaria x ananassa HOM05D006905 ORTHO05D003398 1.3e-35 154.8 364 33.5
FAN14G2439 Fragaria x ananassa HOM05D006905 ORTHO05D003398 1.3e-35 154.8 369 33.1
Migut.N01907 Erythranthe guttata HOM05D006905 ORTHO05D003398 1.7e-35 154.5 370 33.5
EL10Ac4g09180 Beta vulgaris HOM05D006905 ORTHO05D003398 2.4e-34 150.6 368 32.6
PGR083G1281 Punica granatum HOM05D006905 ORTHO05D003398 3.1e-34 150.2 378 33.9
Atru.chr2.731 Acer truncatum HOM05D006905 ORTHO05D003398 4.1e-34 149.8 366 32.5
PGR083G0691 Punica granatum HOM05D006905 ORTHO05D003398 5.3e-34 149.4 373 34.3
FAN09G1595 Fragaria x ananassa HOM05D006905 ORTHO05D003398 6.9e-34 149.1 363 32.8
Nitab4.5_0013433g0040 Nicotiana tabacum HOM05D006905 ORTHO05D003398 9.1e-34 148.7 369 32.8
Nn4g26306 Nelumbo nucifera HOM05D006905 ORTHO05D003398 1.2e-33 148.3 369 32.8
Aqoxy5G00478 Aquilegia oxysepala HOM05D006905 ORTHO05D003398 1.5e-33 147.9 359 32.3
Nitab4.5_0002361g0060 Nicotiana tabacum HOM05D006905 ORTHO05D003398 1.5e-33 147.9 364 33.0
Solyc01g097820.4 Solanum lycopersicum HOM05D006905 ORTHO05D003398 2.0e-33 147.5 368 32.3
PGSC0003DMG400022508 Solanum tuberosum HOM05D006905 ORTHO05D003398 2.0e-33 147.5 369 32.8
CAN.G134.166 Capsicum annuum HOM05D006905 ORTHO05D003398 2.6e-33 147.1 373 32.2
CsaV3_2G004310 Cucumis sativus L. HOM05D006905 ORTHO05D003398 4.5e-33 146.4 363 33.1
Atru.chr2.743 Acer truncatum HOM05D006905 ORTHO05D003398 7.7e-33 145.6 367 33.0
Sed0006348 Sechium edule HOM05D006905 ORTHO05D003398 2.9e-32 143.7 368 34.0
SGA_v2.0_scaffold5G02928 Striga asiatica HOM05D006905 ORTHO05D003398 6.5e-32 142.5 349 31.2
Sopen01g041420 Solanum pennellii HOM05D006905 ORTHO05D003398 8.5e-32 142.1 355 31.8
Carub.0003s0409 Capsella rubella HOM05D006905 ORTHO05D003398 1.9e-31 141.0 361 31.6
AL3G15180 Arabidopsis lyrata HOM05D006905 ORTHO05D003398 2.5e-31 140.6 360 31.9
Aa31LG5G15280 Aethionema arabicum HOM05D006905 ORTHO05D003398 7.2e-31 139.0 346 32.9
Sc20g0000270 Simmondsia chinensis HOM05D006905 ORTHO05D003398 7.2e-31 139.0 361 31.3
Peaxi162Scf00404g00025 Petunia axillaris HOM05D006905 ORTHO05D003398 2.7e-30 137.1 344 30.5
THA.LOC104802824 Tarenaya hassleriana HOM05D006905 ORTHO05D003398 4.7e-30 136.3 353 31.7
Eucgr.L02187 Eucalyptus grandis HOM05D006905 ORTHO05D003398 1.0e-29 135.2 328 33.5
Sp3g03710 Schrenkiella parvula HOM05D006905 ORTHO05D003398 1.0e-29 135.2 361 33.0
Eucgr.B01715 Eucalyptus grandis HOM05D006905 ORTHO05D003398 1.8e-29 134.4 344 32.6
AT3G04890 Arabidopsis thaliana HOM05D006905 ORTHO05D003398 3.9e-29 133.3 360 32.2
Lalb_Chr06g0167991 Lupinus albus HOM05D006905 ORTHO05D003398 5.1e-29 132.9 332 33.7
Thhalv10021425m.g Eutrema salsugineum HOM05D006905 ORTHO05D003398 8.8e-29 132.1 361 32.4
HanXRQChr12g0384101 Helianthus annuus HOM05D006905 ORTHO05D003398 1.1e-28 131.7 347 32.9
Actinidia30925 Actinidia chinensis HOM05D006905 ORTHO05D003398 1.5e-28 131.3 369 32.0
TPR.G11158 Trifolium pratense HOM05D006905 ORTHO05D003398 2.0e-28 131.0 372 32.3
CARHR079160 Cardamine hirsuta HOM05D006905 ORTHO05D003398 4.4e-28 129.8 361 31.3
THA.LOC104802823 Tarenaya hassleriana HOM05D006905 ORTHO05D003398 5.7e-28 129.4 353 30.9
BolC5t34896H Brassica oleracea HOM05D006905 ORTHO05D003398 1.3e-27 128.3 363 32.0
ECA246G1419 Erigeron canadensis HOM05D006905 ORTHO05D003398 1.3e-27 128.3 373 31.6
A05p42710 Brassica napus HOM05D006905 ORTHO05D003398 3.7e-27 126.7 363 32.0
Lsat_1_v5_gn_3_28040 Lactuca sativa HOM05D006905 ORTHO05D003398 6.3e-27 125.9 324 30.9
BcaNung06537 Brassica carinata HOM05D006905 ORTHO05D003398 8.2e-27 125.6 363 31.4
C05p62430 Brassica napus HOM05D006905 ORTHO05D003398 8.2e-27 125.6 363 31.4
Glyma.10G160600 Glycine max HOM05D006905 ORTHO05D003398 1.1e-26 125.2 377 31.6
Phvul.007G186100 Phaseolus vulgaris HOM05D006905 ORTHO05D003398 3.1e-26 123.6 357 30.5
VMungo0720G0828 Vigna mungo HOM05D006905 ORTHO05D003398 3.1e-26 123.6 364 29.4
Potri.013G037050 Populus trichocarpa HOM05D006905 ORTHO05D003398 9.1e-26 122.1 70 85.7
MBI04_g20814_MAGBIO Magnolia biondii HOM05D006905 ORTHO05D003398 1.2e-25 121.7 370 29.5
Haze_04329 Corylus avellana HOM05D006905 ORTHO05D003398 3.4e-25 120.2 167 47.3
Cc02_g31660 Coffea canephora HOM05D006905 ORTHO05D003398 5.9e-25 119.4 252 32.1
CSS0017923 Camellia sinensis var. sinensis HOM05D006905 ORTHO05D003398 1.0e-24 118.6 216 40.7
BraA05t22982Z Brassica rapa HOM05D006905 ORTHO05D003398 1.3e-24 118.2 362 31.2
arahy.Tifrunner.gnm1.ann1.PI1FXK Arachis hypogaea HOM05D006905 ORTHO05D003398 2.2e-24 117.5 323 32.8
AUR62000979 Chenopodium quinoa HOM05D006905 ORTHO05D003398 2.2e-24 117.5 253 30.8
Rhsim07G0175500 Rhododendron simsii HOM05D006905 ORTHO05D003398 3.8e-24 116.7 174 47.1
ATR0737G167 Amborella trichopoda HOM05D006905 ORTHO05D003398 5.0e-24 116.3 377 30.0
Mapoly0006s0024 Marchantia polymorpha HOM05D006905 ORTHO05D003398 1.2e-22 111.7 331 27.2
Lj5g0004067 Lotus japonicus HOM05D006905 ORTHO05D003398 1.0e-21 108.6 150 46.7
BcaC05g30566 Brassica carinata HOM05D006905 ORTHO05D003398 2.3e-21 107.5 246 32.1
FAN05G4190 Fragaria x ananassa HOM05D006905 ORTHO05D003398 6.7e-21 105.9 363 28.9
Hund22112 Selenicereus undatus HOM05D006905 ORTHO05D003398 2.0e-20 104.4 368 28.3
SEGI_10814 Sequoiadendron giganteum HOM05D006905 ORTHO05D003398 4.4e-20 103.2 327 28.4
SalBow8G0693 Salvia bowleyana HOM05D006905 ORTHO05D003398 9.7e-20 102.1 255 28.6
Medtr1g081280 Medicago truncatula HOM05D006905 ORTHO05D003398 2.8e-19 100.5 131 48.1
Oeu023372.2 Olea europaea HOM05D006905 ORTHO05D003398 2.8e-19 100.5 57 77.2
MELO3C004363.2 Cucumis melo HOM05D006905 ORTHO05D003398 6.3e-19 99.4 164 42.7
Glyma.20G227801 Glycine max HOM05D006905 ORTHO05D003398 8.2e-19 99.0 126 50.0
Hma1.2p1_0083F.1_g042790 Hydrangea macrophylla HOM05D006905 ORTHO05D003398 1.8e-18 97.8 57 77.2
AUR62004986 Chenopodium quinoa HOM05D006905 ORTHO05D003398 5.3e-18 96.3 54 75.9
Ah.06g192620 Amaranthus hybridus HOM05D000416 ORTHO05D000322 9.1e-18 95.5 83 51.8
ClCG02G016440 Citrullus lanatus HOM05D006905 ORTHO05D003398 2.6e-17 94.0 50 86.0
unitig_8.g4913 Utricularia gibba HOM05D006905 ORTHO05D003398 3.5e-17 93.6 349 24.6
arahy.Tifrunner.gnm1.ann1.N7GLTS Arachis hypogaea HOM05D006905 ORTHO05D003398 5.9e-17 92.8 129 48.1
Cc02_g31650 Coffea canephora HOM05D006905 ORTHO05D003398 1.0e-16 92.0 72 56.9
Pp3c24_12540 Physcomitrium patens HOM05D006905 ORTHO05D003398 5.0e-16 89.7 333 26.4
Mapoly0016s0115 Marchantia polymorpha HOM05D006905 ORTHO05D003398 6.5e-16 89.4 248 26.6
Mapoly0178s0027 Marchantia polymorpha HOM05D006905 ORTHO05D003398 6.5e-16 89.4 248 26.6
HanXRQChr06g0176711 Helianthus annuus HOM05D006905 ORTHO05D003398 9.4e-15 85.5 52 69.2
Mapoly0059s0020 Marchantia polymorpha HOM05D006905 ORTHO05D003398 2.6e-12 77.4 50 62.0
Gohir.A08G226300 Gossypium hirsutum HOM05D006905 ORTHO05D003398 5.7e-12 76.3 156 39.1
AagrBONN_evm.TU.Sc2ySwM_117.1949 Anthoceros agrestis HOM05D006905 ORTHO05D003398 8.2e-11 72.4 120 38.3
SMO358G0422 Selaginella moellendorffii HOM05D007525 ORTHO05D003398 2.9e-08 63.9 72 44.4
Cre10.g464250 Chlamydomonas reinhardtii HOM05D006905 ORTHO05D003398 3.8e-08 63.5 50 56.0
Gohir.A01G104050 Gossypium hirsutum HOM05D006905 ORTHO05D003398 1.6e-06 58.2 75 50.7


User provided reference genes

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