Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 2.3e-137 492.3 251 100.0
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 9.8e-125 450.3 251 92.4
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 1.2e-103 380.2 254 79.1
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 1.7e-100 369.8 254 76.4
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 4.9e-100 368.2 250 77.6
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 4.9e-100 368.2 249 77.5
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 8.4e-100 367.5 251 74.9
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 9.3e-99 364.0 250 76.0
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 1.7e-97 359.8 254 74.4
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.1e-96 357.1 251 72.5
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 1.3e-95 353.6 253 73.9
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 1.3e-95 353.6 255 75.3
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 2.8e-95 352.4 251 72.5
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 6.2e-95 351.3 243 74.1
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 1.4e-94 350.1 251 71.7
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 9.0e-94 347.4 242 73.6
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 2.0e-93 346.3 243 74.1
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 2.2e-92 342.8 254 69.3
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 2.2e-92 342.8 252 74.2
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 1.9e-91 339.7 254 70.9
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 1.2e-90 337.0 255 67.5
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 1.6e-90 336.7 253 69.2
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 2.1e-90 336.3 254 70.9
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 2.1e-90 336.3 251 70.9
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.1e-90 336.3 249 71.9
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 2.1e-90 336.3 259 69.9
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.7e-90 335.9 252 70.6
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 2.7e-90 335.9 252 70.6
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 3.5e-90 335.5 251 71.3
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 3.5e-90 335.5 253 70.0
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 6.0e-90 334.7 255 67.1
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 2.3e-89 332.8 226 76.1
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 5.1e-89 331.6 266 68.0
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 5.1e-89 331.6 253 69.2
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 8.7e-89 330.9 253 68.4
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 4.3e-88 328.6 253 68.4
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 4.3e-88 328.6 251 69.3
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 1.3e-87 327.0 248 70.2
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 3.1e-86 322.4 264 67.0
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 3.1e-86 322.4 227 72.2
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 5.3e-86 321.6 237 71.3
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 6.9e-86 321.2 238 69.3
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.6e-85 319.3 291 62.5
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 4.5e-85 318.5 250 67.6
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 9.9e-85 317.4 239 67.8
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 3.8e-84 315.5 247 66.8
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 4.9e-84 315.1 251 67.3
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 6.4e-84 314.7 237 66.2
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 8.4e-84 314.3 241 68.9
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 7.1e-83 311.2 233 69.5
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 7.1e-83 311.2 250 65.6
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 9.3e-83 310.8 233 69.5
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 9.3e-83 310.8 252 67.1
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 9.3e-83 310.8 235 67.2
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 1.2e-82 310.5 251 67.3
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 2.1e-82 309.7 251 65.7
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 2.7e-82 309.3 215 72.1
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 3.5e-82 308.9 241 66.0
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 3.5e-82 308.9 245 65.7
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 7.9e-82 307.8 244 66.8
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 1.0e-81 307.4 241 66.0
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 1.8e-81 306.6 246 64.6
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 3.9e-81 305.4 251 65.3
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 3.9e-81 305.4 263 62.7
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 1.5e-80 303.5 215 71.2
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 1.9e-80 303.1 246 66.3
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.3e-80 302.4 258 65.5
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 3.3e-80 302.4 244 65.6
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 3.3e-80 302.4 249 64.7
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 4.3e-80 302.0 239 67.4
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 5.6e-80 301.6 252 64.3
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 3.7e-79 298.9 237 64.6
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 4.8e-79 298.5 258 62.8
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 6.2e-79 298.1 253 64.4
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 1.8e-78 296.6 177 81.9
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 2.4e-78 296.2 260 63.1
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 3.1e-78 295.8 234 67.5
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 1.2e-77 293.9 248 64.9
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 1.5e-77 293.5 234 65.8
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 2.6e-77 292.7 241 65.6
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 5.8e-77 291.6 262 61.8
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 5.8e-77 291.6 262 61.8
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 1.0e-76 290.8 229 66.8
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 1.7e-76 290.0 234 64.1
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 7.1e-75 284.6 233 64.8
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 7.1e-75 284.6 234 62.8
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 2.1e-74 283.1 162 83.3
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 6.0e-74 281.6 223 66.8
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 5.1e-73 278.5 244 57.0
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 8.2e-71 271.2 241 59.3
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 1.1e-70 270.8 241 59.3
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 2.4e-70 269.6 262 55.0
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 3.1e-70 269.2 230 60.9
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 4.1e-70 268.9 270 57.4
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 3.4e-69 265.8 222 60.8
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 1.0e-68 264.2 237 60.3
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 6.5e-68 261.5 231 59.7
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 2.7e-66 256.1 145 89.0
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 3.5e-66 255.8 239 59.8
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 5.1e-65 251.9 220 61.8
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 3.3e-64 249.2 145 84.8
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 5.7e-64 248.4 184 63.0
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 3.2e-59 232.6 192 64.6
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 2.0e-56 223.4 167 70.1
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 5.0e-52 208.8 238 54.2
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 1.0e-49 201.1 134 73.1
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 2.6e-48 196.4 168 58.9
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 3.1e-46 189.5 189 50.8
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 3.1e-46 189.5 164 64.0
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 8.0e-42 174.9 170 48.2
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 9.7e-40 167.9 187 46.5
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 1.3e-39 167.5 95 85.3
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 1.7e-39 167.2 206 45.1
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 2.8e-39 166.4 156 63.5
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.0e-36 157.9 137 65.7
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 1.8e-33 147.1 164 52.4
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 1.5e-27 127.5 96 65.6
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 6.8e-25 118.6 68 80.9
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 3.2e-14 83.2 214 28.5
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 2.0e-13 80.5 132 34.8
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 3.1e-09 66.6 139 31.7
PRCOL_00002748 Prasinoderma coloniale HOM05D006710 ORTHO05D008353 5.2e-09 65.9 139 33.8
HPP92_013649 Vanilla planifolia HOM05D006710 ORTHO05D008353 4.1e-06 56.2 35 74.3
Dinv22904 Davidia involucrata HOM05D006710 ORTHO05D008353 7.0e-06 55.5 62 50.0


User provided reference genes

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