Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0010500 Salix brachista HOM05D015247 ORTHO05D010927 5.9e-172 607.4 307 100.0
Potri.013G011950 Populus trichocarpa HOM05D015247 ORTHO05D010927 4.1e-133 478.4 319 78.1
Potri.005G021500 Populus trichocarpa HOM05D015247 ORTHO05D010927 5.0e-62 242.3 270 55.9
Sabra05G0027500 Salix brachista HOM05D015247 ORTHO05D010927 8.2e-57 224.9 268 52.6
Dinv24410 Davidia involucrata HOM05D010455 ORTHO05D010927 2.4e-32 143.7 327 37.9
QL03p018916 Quercus lobata HOM05D015247 ORTHO05D010927 1.6e-23 114.4 287 32.8
Ciclev10003158m.g Citrus clementina HOM05D015247 ORTHO05D010927 4.5e-23 112.8 321 32.4
Manes.09G174200 Manihot esculenta HOM05D010455 ORTHO05D010927 1.0e-22 111.7 327 33.6
Duzib177G0175 Durio zibethinus HOM05D016798 ORTHO05D016261 1.4e-16 91.3 311 29.9
Rhsim05G0136000 Rhododendron simsii HOM05D010455 ORTHO05D010927 3.2e-16 90.1 310 29.0
Actinidia19768 Actinidia chinensis HOM05D010455 ORTHO05D010927 7.3e-13 79.0 292 27.1
ECA236G1914 Erigeron canadensis HOM05D000101 ORTHO05D000089 1.6e-12 77.8 71 54.9
Nn4g25706 Nelumbo nucifera HOM05D015247 ORTHO05D010927 2.8e-12 77.0 344 26.2
Cpa.g.sc48.126 Carica papaya HOM05D010455 ORTHO05D010927 3.6e-12 76.6 277 28.2
unitig_42.g32309 Utricularia gibba HOM05D010455 ORTHO05D010927 1.5e-10 71.2 63 57.1
unitig_899.g14744 Utricularia gibba HOM05D010455 ORTHO05D010927 1.5e-10 71.2 63 57.1
CSS0003559 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 3.4e-10 70.1 35 80.0
CSS0040289 Camellia sinensis var. sinensis HOM05D010455 ORTHO05D010927 3.4e-10 70.1 35 80.0
Nitab4.5_0001971g0050 Nicotiana tabacum HOM05D010455 ORTHO05D010927 7.5e-10 68.9 290 27.9
Lsat_1_v5_gn_9_124561 Lactuca sativa HOM05D010455 ORTHO05D010927 9.8e-10 68.6 70 51.4
Peaxi162Scf00037g00185 Petunia axillaris HOM05D010455 ORTHO05D010927 9.8e-10 68.6 290 28.3
Prupe.6G317300 Prunus persica HOM05D010455 ORTHO05D010927 1.3e-09 68.2 93 45.2
Dinv30847 Davidia involucrata HOM05D015247 ORTHO05D010927 2.2e-09 67.4 177 29.9
Nitab4.5_0002612g0010 Nicotiana tabacum HOM05D010455 ORTHO05D010927 2.9e-09 67.0 289 28.4
Solyc01g100070.3 Solanum lycopersicum HOM05D010455 ORTHO05D010927 2.9e-09 67.0 43 69.8
CARHR186470 Cardamine hirsuta HOM05D012757 ORTHO05D010927 3.7e-09 66.6 34 82.4
FAN05G0049 Fragaria x ananassa HOM05D023588 ORTHO05D025400 3.7e-09 66.6 262 28.6
Migut.B01004 Erythranthe guttata HOM05D010455 ORTHO05D010927 4.9e-09 66.2 111 37.8
PGSC0003DMG400024774 Solanum tuberosum HOM05D010455 ORTHO05D010927 4.9e-09 66.2 297 27.3
Thhalv10005673m.g Eutrema salsugineum HOM05D012757 ORTHO05D010927 1.1e-08 65.1 34 82.4
THA.LOC104820098 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 1.4e-08 64.7 56 58.9
FvH4_6g07020 Fragaria vesca HOM05D023588 ORTHO05D025400 1.9e-08 64.3 267 30.3
FAN14G1661 Fragaria x ananassa HOM05D023588 ORTHO05D025400 1.9e-08 64.3 267 30.3
Sopen01g043600 Solanum pennellii HOM05D010455 ORTHO05D010927 2.4e-08 63.9 43 67.4
A09p05550 Brassica napus HOM05D012757 ORTHO05D010927 3.2e-08 63.5 39 74.4
FAN02G4419 Fragaria x ananassa HOM05D023588 ORTHO05D025400 4.1e-08 63.2 272 28.7
BcaC04g23659 Brassica carinata HOM05D012757 ORTHO05D010927 5.4e-08 62.8 39 74.4
C09p06040 Brassica napus HOM05D012757 ORTHO05D010927 5.4e-08 62.8 39 74.4
BolC9t53529H Brassica oleracea HOM05D012757 ORTHO05D010927 5.4e-08 62.8 39 74.4
BraA09t36196Z Brassica rapa HOM05D012757 ORTHO05D010927 5.4e-08 62.8 39 74.4
THA.LOC104802786 Tarenaya hassleriana HOM05D012757 ORTHO05D010927 7.0e-08 62.4 85 47.1
BcaB04g19697 Brassica carinata HOM05D012757 ORTHO05D010927 2.7e-07 60.5 59 52.5
Carub.0006s2463 Capsella rubella HOM05D012757 ORTHO05D010927 3.5e-07 60.1 40 65.0
Carub.0006s2524 Capsella rubella HOM05D012757 ORTHO05D010927 3.5e-07 60.1 43 62.8
Lalb_Chr02g0148001 Lupinus albus HOM05D014479 ORTHO05D010927 4.6e-07 59.7 218 29.8
TPR.G17708 Trifolium pratense HOM05D014479 ORTHO05D017984 7.8e-07 58.9 305 29.2
Lsat_1_v5_gn_1_15881 Lactuca sativa HOM05D002803 ORTHO05D003089 3.0e-06 57.0 73 41.1
Psat6g151760 Pisum sativum HOM05D014479 ORTHO05D017984 3.0e-06 57.0 279 29.4
AUR62000720 Chenopodium quinoa HOM05D031177 ORTHO05D026471 3.9e-06 56.6 42 61.9
Gohir.A13G174840 Gossypium hirsutum HOM05D016798 ORTHO05D016261 5.0e-06 56.2 300 25.3
AT5G27020 Arabidopsis thaliana HOM05D012757 ORTHO05D010927 8.6e-06 55.5 108 37.0
AUR62005244 Chenopodium quinoa HOM05D031177 ORTHO05D026471 8.6e-06 55.5 42 59.5


User provided reference genes

Program Settings