Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra13G0001700 Salix brachista HOM05D006309 ORTHO05D007937 1.5e-64 249.2 115 100.0
Potri.005G002900 Populus trichocarpa HOM05D006309 ORTHO05D007937 7.1e-46 187.2 115 80.0
Sabra05G0000300 Salix brachista HOM05D006309 ORTHO05D007937 6.6e-44 180.6 140 65.7
Sabra05G0014400 Salix brachista HOM05D006309 ORTHO05D007937 6.6e-44 180.6 140 65.7
Phvul.007G205000 Phaseolus vulgaris HOM05D006309 ORTHO05D007937 9.9e-40 166.8 115 71.3
Duzib205G1677 Durio zibethinus HOM05D006309 ORTHO05D007937 1.3e-39 166.4 115 72.2
Oeu061901.1 Olea europaea HOM05D006309 ORTHO05D007937 1.3e-39 166.4 115 72.2
Nn7g36656 Nelumbo nucifera HOM05D006309 ORTHO05D007937 1.7e-39 166.0 115 71.3
Rhsim11G0104500 Rhododendron simsii HOM05D006309 ORTHO05D007937 1.7e-39 166.0 115 73.0
arahy.Tifrunner.gnm1.ann1.01IKZ7 Arachis hypogaea HOM05D006309 ORTHO05D007937 2.2e-39 165.6 131 64.9
Cc02_g35850 Coffea canephora HOM05D006309 ORTHO05D007937 2.2e-39 165.6 115 72.2
Manes.09G181100 Manihot esculenta HOM05D006309 ORTHO05D007937 2.2e-39 165.6 115 71.3
DCAR_007528 Daucus carota HOM05D006309 ORTHO05D007937 2.9e-39 165.2 115 70.4
Dinv24513 Davidia involucrata HOM05D006309 ORTHO05D007937 2.9e-39 165.2 115 72.2
Nitab4.5_0000936g0050 Nicotiana tabacum HOM05D006309 ORTHO05D007937 2.9e-39 165.2 112 72.3
CAN.G637.25 Capsicum annuum HOM05D006309 ORTHO05D007937 3.8e-39 164.9 112 73.2
MD12G1199900 Malus domestica HOM05D006309 ORTHO05D007937 3.8e-39 164.9 115 70.4
Solyc03g098120.3 Solanum lycopersicum HOM05D006309 ORTHO05D007937 3.8e-39 164.9 112 72.3
Sopen03g028820 Solanum pennellii HOM05D006309 ORTHO05D007937 3.8e-39 164.9 112 72.3
Peaxi162Scf00171g00731 Petunia axillaris HOM05D006309 ORTHO05D007937 6.4e-39 164.1 112 71.4
Prupe.6G304700 Prunus persica HOM05D006309 ORTHO05D007937 6.4e-39 164.1 112 72.3
VMungo0720G0633 Vigna mungo HOM05D006309 ORTHO05D007937 6.4e-39 164.1 114 70.2
Cpa.g.sc48.50 Carica papaya HOM05D006309 ORTHO05D007937 8.4e-39 163.7 115 71.3
Nitab4.5_0004454g0020 Nicotiana tabacum HOM05D006309 ORTHO05D007937 8.4e-39 163.7 112 71.4
QL03p010963 Quercus lobata HOM05D006309 ORTHO05D007937 8.4e-39 163.7 112 72.3
Lalb_Chr02g0147551 Lupinus albus HOM05D006309 ORTHO05D007937 1.1e-38 163.3 115 67.8
PGSC0003DMG400031051 Solanum tuberosum HOM05D006309 ORTHO05D007937 1.1e-38 163.3 112 71.4
vmacro01669 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 1.1e-38 163.3 114 71.9
Lalb_Chr21g0310061 Lupinus albus HOM05D006309 ORTHO05D007937 1.4e-38 162.9 115 67.8
vmacro16416 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 1.4e-38 162.9 115 71.3
CSS0019637 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 1.9e-38 162.5 115 70.4
CSS0033999 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 1.9e-38 162.5 115 70.4
CDE09G0003 Ceratophyllum demersum HOM05D006309 ORTHO05D007937 1.9e-38 162.5 114 67.5
Ciclev10013195m.g Citrus clementina HOM05D006309 ORTHO05D007937 1.9e-38 162.5 115 69.6
Haze_03988 Corylus avellana HOM05D006309 ORTHO05D007937 1.9e-38 162.5 115 71.3
Rhsim11G0105200 Rhododendron simsii HOM05D006309 ORTHO05D007937 1.9e-38 162.5 115 71.3
Ah.06g190700 Amaranthus hybridus HOM05D006309 ORTHO05D007937 2.4e-38 162.2 115 70.4
arahy.Tifrunner.gnm1.ann1.RC3JIS Arachis hypogaea HOM05D006309 ORTHO05D007937 2.4e-38 162.2 115 69.6
Medtr1g484930 Medicago truncatula HOM05D006309 ORTHO05D007937 2.4e-38 162.2 115 68.7
GSVIVG01031328001 Vitis vinifera HOM05D006309 ORTHO05D007937 2.4e-38 162.2 115 69.6
CiPaw.07G036200 Carya illinoinensis HOM05D006309 ORTHO05D007937 3.2e-38 161.8 115 70.4
FvH4_6g08490 Fragaria vesca HOM05D006309 ORTHO05D007937 3.2e-38 161.8 115 69.6
FAN02G0285 Fragaria x ananassa HOM05D006309 ORTHO05D007937 3.2e-38 161.8 115 69.6
FAN05G1622 Fragaria x ananassa HOM05D006309 ORTHO05D007937 3.2e-38 161.8 115 69.6
FAN09G1610 Fragaria x ananassa HOM05D006309 ORTHO05D007937 3.2e-38 161.8 115 69.6
FAN14G3239 Fragaria x ananassa HOM05D006309 ORTHO05D007937 3.2e-38 161.8 115 69.6
SalBow4G0401 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.2e-38 161.8 123 69.1
SalBow4G1963 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.2e-38 161.8 123 69.1
SalBow4G2407 Salvia bowleyana HOM05D006309 ORTHO05D007937 3.2e-38 161.8 123 69.1
Hund05518 Selenicereus undatus HOM05D006309 ORTHO05D007937 3.2e-38 161.8 115 70.4
TPR.G2591 Trifolium pratense HOM05D006309 ORTHO05D007937 3.2e-38 161.8 115 67.8
arahy.Tifrunner.gnm1.ann1.P9U7KY Arachis hypogaea HOM05D006309 ORTHO05D007937 5.5e-38 161.0 115 68.7
arahy.Tifrunner.gnm1.ann1.VGN228 Arachis hypogaea HOM05D006309 ORTHO05D007937 5.5e-38 161.0 115 68.7
TAR636G2194 Trochodendron aralioides HOM05D006309 ORTHO05D007937 7.1e-38 160.6 112 70.5
Sc16g0009400 Simmondsia chinensis HOM05D006309 ORTHO05D007937 9.3e-38 160.2 115 67.0
Ca_10200_v3 Cicer arietinum L. HOM05D006309 ORTHO05D007937 1.2e-37 159.8 115 67.8
Migut.H01672 Erythranthe guttata HOM05D006309 ORTHO05D007937 1.2e-37 159.8 115 68.7
Gohir.D08G174300 Gossypium hirsutum HOM05D006309 ORTHO05D007937 1.2e-37 159.8 114 70.2
Gorai.004G182000 Gossypium raimondii HOM05D006309 ORTHO05D007937 1.2e-37 159.8 114 70.2
TWI36G0052 Tripterygium wilfordii HOM05D006309 ORTHO05D007937 1.2e-37 159.8 115 68.7
Hma1.2p1_0759F.1_g213920 Hydrangea macrophylla HOM05D006309 ORTHO05D007937 1.6e-37 159.5 111 70.3
Psat6g155680 Pisum sativum HOM05D006309 ORTHO05D007937 1.6e-37 159.5 114 67.5
Sc09g0002420 Simmondsia chinensis HOM05D006309 ORTHO05D007937 2.1e-37 159.1 115 67.8
Atru.chr12.1543 Acer truncatum HOM05D006309 ORTHO05D007937 2.7e-37 158.7 112 69.6
Gohir.A08G153400 Gossypium hirsutum HOM05D006309 ORTHO05D007937 2.7e-37 158.7 114 70.2
PGR083G2709 Punica granatum HOM05D006309 ORTHO05D007937 2.7e-37 158.7 114 68.4
Thecc.03G310900 Theobroma cacao HOM05D006309 ORTHO05D007937 2.7e-37 158.7 115 68.7
CiPaw.04G111200 Carya illinoinensis HOM05D006309 ORTHO05D007937 3.5e-37 158.3 115 68.7
Glyma.20G090800 Glycine max HOM05D006309 ORTHO05D007937 3.5e-37 158.3 111 68.5
Glyma.20G092200 Glycine max HOM05D006309 ORTHO05D007937 3.5e-37 158.3 111 68.5
AUR62000475 Chenopodium quinoa HOM05D006309 ORTHO05D007937 7.9e-37 157.1 115 66.1
EL10Ac4g09558 Beta vulgaris HOM05D006309 ORTHO05D007937 1.0e-36 156.8 111 70.3
ClCG02G014650 Citrullus lanatus HOM05D006309 ORTHO05D007937 1.0e-36 156.8 114 67.5
Sed0021183 Sechium edule HOM05D006309 ORTHO05D007937 1.0e-36 156.8 114 68.4
FvH4_2g19190 Fragaria vesca HOM05D006309 ORTHO05D007937 1.3e-36 156.4 115 67.8
FAN24G3038 Fragaria x ananassa HOM05D006309 ORTHO05D007937 1.3e-36 156.4 115 67.8
Os01g0250600 Oryza sativa ssp. japonica HOM05D006309 ORTHO05D007937 1.3e-36 156.4 113 68.1
Carub.0002s0712 Capsella rubella HOM05D006309 ORTHO05D007937 2.3e-36 155.6 114 65.8
MELO3C004152.2 Cucumis melo HOM05D006309 ORTHO05D007937 2.3e-36 155.6 114 66.7
RcHm_v2.0_Chr3g0458531 Rosa chinensis HOM05D006309 ORTHO05D007937 2.3e-36 155.6 115 67.0
AL1G67090 Arabidopsis lyrata HOM05D006309 ORTHO05D007937 3.9e-36 154.8 114 64.9
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 5.1e-36 154.5 114 66.7
Lj5g0003279 Lotus japonicus HOM05D006309 ORTHO05D007937 5.1e-36 154.5 111 69.4
SalBow5G3054 Salvia bowleyana HOM05D006309 ORTHO05D007937 5.1e-36 154.5 115 67.0
ATR0796G010 Amborella trichopoda HOM05D006309 ORTHO05D007937 6.7e-36 154.1 112 69.6
AT1G57540 Arabidopsis thaliana HOM05D006309 ORTHO05D007937 8.7e-36 153.7 114 64.0
unitig_62.g23615 Utricularia gibba HOM05D006309 ORTHO05D007937 8.7e-36 153.7 111 67.6
Actinidia22855 Actinidia chinensis HOM05D006309 ORTHO05D007937 1.1e-35 153.3 114 66.7
Aqoxy2G02488 Aquilegia oxysepala HOM05D006309 ORTHO05D007937 1.5e-35 152.9 114 64.9
BcaB07g31141 Brassica carinata HOM05D006309 ORTHO05D007937 1.5e-35 152.9 114 64.0
BcaC04g22081 Brassica carinata HOM05D006309 ORTHO05D007937 1.5e-35 152.9 114 64.0
C09p23680 Brassica napus HOM05D006309 ORTHO05D007937 1.5e-35 152.9 114 64.0
BraA09t37510Z Brassica rapa HOM05D006309 ORTHO05D007937 1.5e-35 152.9 114 64.0
AUR62017099 Chenopodium quinoa HOM05D006309 ORTHO05D007937 1.5e-35 152.9 111 66.7
Sp1g28800 Schrenkiella parvula HOM05D006309 ORTHO05D007937 1.5e-35 152.9 114 64.0
Sp2g05970 Schrenkiella parvula HOM05D006309 ORTHO05D007937 1.5e-35 152.9 114 64.0
CARHR288700 Cardamine hirsuta HOM05D006309 ORTHO05D007937 1.9e-35 152.5 114 64.9
ECA233G1704 Erigeron canadensis HOM05D006309 ORTHO05D007937 1.9e-35 152.5 115 66.1
FAN15G2822 Fragaria x ananassa HOM05D006309 ORTHO05D007937 2.5e-35 152.1 115 66.1
BolC9t55290H Brassica oleracea HOM05D006309 ORTHO05D007937 3.3e-35 151.8 114 63.2
CsaV3_2G007320 Cucumis sativus L. HOM05D006309 ORTHO05D007937 3.3e-35 151.8 114 66.7
CANSAT54G2801 Cannabis sativa HOM05D006309 ORTHO05D007937 5.6e-35 151.0 115 67.0
Thhalv10010969m.g Eutrema salsugineum HOM05D006309 ORTHO05D007937 5.6e-35 151.0 114 64.0
A09p18900 Brassica napus HOM05D006309 ORTHO05D007937 7.4e-35 150.6 114 63.2
Aa31LG2G11310 Aethionema arabicum HOM05D006309 ORTHO05D007937 1.3e-34 149.8 114 63.2
THA.LOC104820476 Tarenaya hassleriana HOM05D006309 ORTHO05D007937 1.3e-34 149.8 111 63.1
HanXRQChr08g0212181 Helianthus annuus HOM05D006309 ORTHO05D007937 6.2e-34 147.5 110 67.3
Prupe.8G045300 Prunus persica HOM05D006309 ORTHO05D007937 9.0e-33 143.7 112 65.2
Lj4g0016187 Lotus japonicus HOM05D006309 ORTHO05D007937 2.6e-32 142.1 115 64.3
Cfa012394 Carpinus fangiana HOM05D006309 ORTHO05D007937 1.7e-31 139.4 114 62.3
PSO210G0390 Papaver somniferum HOM05D006309 ORTHO05D007937 1.4e-30 136.3 112 59.8
PSO761G0726 Papaver somniferum HOM05D006309 ORTHO05D007937 1.4e-30 136.3 112 59.8
EL10Ac4g07573 Beta vulgaris HOM05D006309 ORTHO05D007937 1.6e-29 132.9 115 60.0
MBI18_g10373_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 1.3e-28 129.8 115 60.9
Dinv30948 Davidia involucrata HOM05D006309 ORTHO05D007937 3.1e-25 118.6 91 67.0
HanXRQChr06g0180851 Helianthus annuus HOM05D006309 ORTHO05D007937 1.5e-19 99.8 52 84.6
HanXRQChr16g0506271 Helianthus annuus HOM05D006309 ORTHO05D007937 1.5e-19 99.8 52 84.6
Mapoly0075s0044 Marchantia polymorpha HOM05D006309 ORTHO05D007937 2.2e-18 95.9 112 42.0
Pp3c8_1240 Physcomitrium patens HOM05D006309 ORTHO05D007937 6.3e-18 94.4 111 42.3
COL.COLO4_16932 Corchorus olitorius HOM05D006309 ORTHO05D007937 4.5e-16 88.2 48 87.5
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 4.5e-16 88.2 49 77.6
Glyma.09G093300 Glycine max HOM05D006309 ORTHO05D000504 5.9e-16 87.8 53 69.8
Zm00001eb239560 Zea mays HOM05D006309 ORTHO05D007937 7.7e-16 87.4 54 72.2
MBI06_g06498_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 1.7e-15 86.3 48 83.3
Potri.013G002301 Populus trichocarpa HOM05D006309 ORTHO05D007937 3.6e-13 78.6 41 90.2
BNapus_Darmor_BZH_scaffold_223p00020 Brassica napus HOM05D006309 ORTHO05D007937 1.4e-09 66.6 38 78.9
TAR627G1128 Trochodendron aralioides HOM05D006309 ORTHO05D007937 4.2e-06 55.1 37 73.0


User provided reference genes

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