Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 5.8e-130 467.6 244 100.0
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 6.2e-116 421.0 238 88.7
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 1.2e-90 337.0 236 72.5
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 1.0e-86 323.9 243 68.3
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 1.6e-84 316.6 244 68.0
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 6.3e-84 314.7 244 68.0
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 6.3e-84 314.7 245 68.2
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 1.8e-83 313.2 240 67.5
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 2.4e-83 312.8 245 67.8
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 1.3e-81 307.0 244 66.8
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 1.6e-79 300.1 225 71.6
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 1.6e-79 300.1 240 67.1
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 2.1e-79 299.7 243 69.5
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 3.6e-79 298.9 240 64.2
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 4.6e-79 298.5 245 69.8
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 7.9e-79 297.7 235 63.4
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 7.9e-79 297.7 240 61.7
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 1.0e-78 297.4 247 64.4
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 1.8e-78 296.6 241 62.2
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.3e-78 296.2 236 64.0
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 2.3e-78 296.2 259 62.2
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 5.1e-78 295.0 236 64.0
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.9e-77 293.1 236 66.1
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 3.3e-77 292.4 242 63.2
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 4.3e-77 292.0 238 65.1
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 5.7e-77 291.6 236 67.4
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 1.3e-76 290.4 244 63.1
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.7e-76 290.0 251 62.5
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.2e-76 289.7 236 63.1
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 2.2e-76 289.7 240 63.3
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.8e-75 286.6 236 65.7
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 3.1e-75 285.8 246 61.8
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 6.9e-75 284.6 236 65.7
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 6.9e-75 284.6 243 63.8
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 9.1e-75 284.3 251 61.0
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 2.0e-74 283.1 256 59.8
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 2.0e-74 283.1 257 60.3
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 2.0e-74 283.1 233 62.7
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 3.4e-74 282.3 241 64.3
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 3.4e-74 282.3 247 59.9
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 5.9e-74 281.6 251 61.4
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 5.9e-74 281.6 244 61.9
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 7.7e-74 281.2 243 62.6
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 1.7e-73 280.0 236 61.9
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 3.8e-73 278.9 251 60.2
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 1.4e-72 276.9 244 61.5
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 5.5e-72 275.0 242 60.3
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 9.4e-72 274.2 246 57.3
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 9.4e-72 274.2 238 60.9
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 2.7e-71 272.7 237 58.2
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 7.9e-71 271.2 245 58.0
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 3.9e-70 268.9 240 60.4
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 5.1e-70 268.5 238 61.3
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 5.1e-70 268.5 241 57.3
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 6.7e-70 268.1 241 60.2
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 1.1e-69 267.3 213 63.8
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 2.0e-69 266.5 241 57.3
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 4.4e-69 265.4 255 55.7
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 5.7e-69 265.0 229 59.4
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 9.7e-69 264.2 238 60.5
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 9.7e-69 264.2 246 56.1
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 1.7e-68 263.5 191 68.6
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 2.8e-68 262.7 234 57.7
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 3.7e-68 262.3 246 55.7
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 8.2e-68 261.2 250 57.6
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 1.1e-67 260.8 233 59.2
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 5.3e-67 258.5 243 57.6
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 1.5e-66 256.9 235 57.9
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 3.4e-66 255.8 235 57.9
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 5.0e-65 251.9 255 53.3
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 8.0e-63 244.6 251 55.8
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 8.0e-63 244.6 223 59.6
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 1.0e-62 244.2 226 59.3
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 2.3e-62 243.0 227 59.0
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 3.0e-62 242.7 222 59.0
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 5.2e-62 241.9 227 58.6
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 5.2e-62 241.9 227 58.6
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 5.2e-62 241.9 243 55.1
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 1.5e-61 240.4 227 58.6
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 2.0e-61 240.0 171 70.2
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 2.6e-61 239.6 238 55.0
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 3.3e-61 239.2 199 57.8
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 4.4e-61 238.8 225 58.2
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 7.4e-61 238.0 225 56.9
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 7.4e-61 238.0 223 59.2
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 2.8e-60 236.1 248 55.2
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 1.4e-59 233.8 199 59.3
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 4.1e-59 232.3 239 54.8
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 4.5e-58 228.8 212 59.0
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 5.9e-58 228.4 229 56.3
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 1.2e-55 220.7 236 53.0
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 5.2e-54 215.3 143 71.3
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 4.4e-53 212.2 243 51.4
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 6.3e-52 208.4 180 56.1
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 1.3e-49 200.7 183 54.1
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 2.5e-48 196.4 137 69.3
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 3.6e-47 192.6 166 61.4
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 2.3e-46 189.9 181 53.0
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 3.0e-46 189.5 216 45.8
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 5.7e-45 185.3 209 45.9
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 1.6e-42 177.2 205 45.9
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 1.6e-42 177.2 202 49.0
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 7.2e-40 168.3 218 41.7
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 4.0e-38 162.5 221 42.5
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 1.3e-36 157.5 215 42.8
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 1.6e-31 140.6 87 75.9
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.4e-30 137.5 182 39.6
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 2.3e-30 136.7 173 47.4
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 1.1e-27 127.9 137 53.3
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 3.0e-25 119.8 135 48.1
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 3.9e-25 119.4 182 37.9
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 1.5e-21 107.5 83 62.7
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 3.3e-16 89.7 67 65.7
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 7.3e-16 88.6 139 41.0
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 8.9e-14 81.6 129 38.8
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.3e-12 77.8 118 38.1
Cre10.g463800 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 1.1e-08 64.7 133 35.3
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 1.1e-08 64.7 76 46.1
Oeu004139.1 Olea europaea HOM05D007174 ORTHO05D009061 1.4e-06 57.8 91 38.5
arahy.Tifrunner.gnm1.ann1.3M52EB Arachis hypogaea HOM05D007174 ORTHO05D010441 3.1e-06 56.6 40 67.5


User provided reference genes

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