Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 1.2e-204 716.5 396 100.0
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 4.1e-141 505.4 355 78.3
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 5.9e-108 395.2 356 65.4
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 1.8e-104 383.6 420 57.9
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 1.8e-101 373.6 344 64.2
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 4.0e-80 302.8 343 53.6
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 1.7e-78 297.4 375 49.6
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 1.7e-75 287.3 317 52.4
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 4.3e-74 282.7 325 50.8
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 1.2e-73 281.2 317 51.1
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 8.1e-73 278.5 325 51.1
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 1.4e-72 277.7 324 50.9
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 6.8e-72 275.4 313 51.8
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 8.9e-72 275.0 325 50.2
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 8.9e-72 275.0 323 50.8
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 8.9e-72 275.0 305 52.8
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 3.4e-71 273.1 325 51.1
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 3.4e-71 273.1 325 49.8
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 2.2e-70 270.4 346 47.4
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 4.9e-70 269.2 355 49.3
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 9.2e-69 265.0 407 43.5
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 1.6e-68 264.2 360 46.9
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 3.5e-68 263.1 360 47.2
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 4.6e-68 262.7 360 47.2
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 1.3e-67 261.2 362 46.1
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 1.7e-67 260.8 362 46.4
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 6.6e-67 258.8 347 46.4
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 3.3e-66 256.5 354 46.0
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 5.6e-66 255.8 360 46.1
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 5.6e-66 255.8 310 49.4
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 3.6e-65 253.1 352 46.0
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 4.7e-65 252.7 384 43.2
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 1.1e-64 251.5 351 45.3
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 1.1e-64 251.5 351 45.6
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 2.4e-64 250.4 317 47.3
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 2.4e-64 250.4 354 45.8
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 6.8e-64 248.8 311 47.3
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 5.8e-63 245.7 325 46.8
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 5.8e-63 245.7 363 43.8
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 9.9e-63 245.0 347 44.4
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 9.9e-63 245.0 349 44.7
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 8.4e-62 241.9 364 42.6
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 1.4e-61 241.1 361 42.4
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 1.9e-61 240.7 364 42.3
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 4.2e-61 239.6 362 42.5
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 1.2e-60 238.0 348 44.0
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 1.7e-59 234.2 353 42.8
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 6.6e-59 232.3 316 44.9
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 7.3e-58 228.8 350 41.4
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 1.3e-57 228.0 358 42.5
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 4.8e-57 226.1 358 42.2
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 4.8e-57 226.1 356 43.0
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 6.2e-57 225.7 354 41.8
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 1.8e-56 224.2 354 40.7
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 2.4e-56 223.8 370 43.0
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 2.4e-56 223.8 363 41.3
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 1.2e-55 221.5 355 41.4
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.2e-55 221.5 317 43.8
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 1.5e-55 221.1 364 40.7
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 2.0e-55 220.7 336 42.3
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 2.0e-55 220.7 340 42.1
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 2.0e-55 220.7 358 41.9
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 2.6e-55 220.3 313 43.1
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 2.6e-55 220.3 383 38.6
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 3.4e-55 219.9 350 41.1
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 4.4e-55 219.5 358 41.3
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 7.6e-55 218.8 358 41.9
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 9.9e-55 218.4 350 41.1
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 1.3e-54 218.0 350 39.4
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 1.3e-54 218.0 361 40.7
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 1.7e-54 217.6 363 40.5
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 2.2e-54 217.2 277 45.5
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 2.2e-54 217.2 355 40.6
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 1.1e-53 214.9 359 40.4
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 1.2e-52 211.5 349 41.0
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 2.1e-52 210.7 352 41.2
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 2.1e-52 210.7 351 41.0
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 2.7e-52 210.3 355 38.6
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 2.7e-52 210.3 350 39.7
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 3.5e-52 209.9 269 45.4
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 6.0e-52 209.1 388 38.4
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 6.0e-52 209.1 307 41.4
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 3.9e-51 206.5 347 40.6
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 8.7e-51 205.3 347 38.3
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 1.5e-50 204.5 259 50.2
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.5e-50 204.5 341 38.7
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.9e-50 204.1 336 39.9
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 9.6e-50 201.8 347 38.6
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 9.6e-50 201.8 360 37.8
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 3.1e-48 196.8 367 39.5
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 4.0e-48 196.4 361 38.5
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 5.3e-48 196.1 348 37.9
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 6.9e-48 195.7 318 39.9
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 1.5e-47 194.5 353 38.5
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 2.6e-47 193.7 314 40.4
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 3.4e-47 193.4 331 39.3
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 7.6e-47 192.2 325 40.6
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 9.9e-47 191.8 360 37.2
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 1.7e-46 191.0 366 37.4
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 2.2e-46 190.7 355 38.3
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 3.8e-46 189.9 324 38.9
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 4.9e-46 189.5 311 38.6
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 8.4e-46 188.7 353 38.0
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.9e-45 187.6 361 36.8
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 2.4e-45 187.2 314 38.5
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 3.2e-45 186.8 353 38.0
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 3.2e-45 186.8 325 38.8
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 7.1e-45 185.7 354 36.4
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 7.1e-45 185.7 354 36.4
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 1.2e-44 184.9 354 36.4
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 2.1e-44 184.1 304 37.5
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 2.7e-44 183.7 353 37.1
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 1.9e-42 177.6 241 46.1
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 2.5e-42 177.2 355 36.1
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 3.3e-42 176.8 355 35.8
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 9.6e-42 175.3 336 36.6
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 1.3e-41 174.9 338 37.3
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 1.6e-41 174.5 205 50.2
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 2.1e-41 174.1 322 37.3
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 2.4e-40 170.6 261 42.5
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 3.1e-40 170.2 243 43.6
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 3.8e-38 163.3 219 46.1
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 1.3e-33 148.3 244 41.8
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 2.1e-33 147.5 261 36.4
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 2.8e-33 147.1 260 36.2
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 4.0e-32 143.3 290 35.5
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 2.2e-30 137.5 200 43.0
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 2.1e-28 131.0 148 48.0
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 8.7e-27 125.6 345 29.9
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 5.7e-26 122.9 234 36.3
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 1.6e-25 121.3 248 33.5
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 4.1e-24 116.7 364 29.4
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 5.3e-24 116.3 348 29.0
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 1.3e-22 111.7 283 26.5
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 8.5e-22 109.0 187 33.2
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 4.2e-21 106.7 117 49.6
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 8.8e-19 99.0 320 25.3
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 4.8e-17 93.2 89 50.6
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 8.2e-17 92.4 69 63.8
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 1.8e-16 91.3 194 35.6
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 1.2e-15 88.6 169 32.0
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 7.2e-13 79.3 265 26.8
Atru.chr9.2524 Acer truncatum HOM05D004617 ORTHO05D005531 4.7e-12 76.6 123 39.8
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 1.4e-11 75.1 257 26.5
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 2.3e-11 74.3 93 40.9
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 4.4e-10 70.1 163 30.1
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 1.7e-09 68.2 102 33.3
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 3.7e-09 67.0 91 36.3
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 6.3e-09 66.2 91 37.4
Pp3c3_37370 Physcomitrium patens HOM05D004617 ORTHO05D005531 1.4e-08 65.1 91 37.4


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