Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra12G0061800 Salix brachista HOM05D007505 ORTHO05D009476 5.5e-84 314.3 165 100.0
Potri.012G086300 Populus trichocarpa HOM05D007505 ORTHO05D009476 7.1e-47 191.0 127 78.7
Potri.012G086000 Populus trichocarpa HOM05D007505 ORTHO05D009476 1.2e-43 180.3 122 77.0
Potri.015G084200 Populus trichocarpa HOM05D007505 ORTHO05D009476 2.3e-37 159.5 116 70.7
Sabra15G0107300 Salix brachista HOM05D007505 ORTHO05D009476 9.3e-31 137.5 119 68.1
Manes.06G110400 Manihot esculenta HOM05D007505 ORTHO05D009476 2.1e-30 136.3 115 61.7
Ciclev10022689m.g Citrus clementina HOM05D007505 ORTHO05D009476 6.0e-30 134.8 120 58.3
Aqoxy5G03745 Aquilegia oxysepala HOM05D007505 ORTHO05D009476 8.1e-27 124.4 126 57.1
Thecc.03G026000 Theobroma cacao HOM05D007505 ORTHO05D009476 8.1e-27 124.4 117 54.7
Duzib205G0367 Durio zibethinus HOM05D007505 ORTHO05D009476 1.1e-26 124.0 105 61.0
Peaxi162Scf00089g01341 Petunia axillaris HOM05D002460 ORTHO05D002716 3.1e-26 122.5 140 50.7
Nitab4.5_0010452g0040 Nicotiana tabacum HOM05D002460 ORTHO05D002716 6.9e-26 121.3 105 57.1
CAN.G338.34 Capsicum annuum HOM05D007505 ORTHO05D009476 1.2e-25 120.6 116 52.6
Cpa.g.sc159.18 Carica papaya HOM05D007505 ORTHO05D009476 3.4e-25 119.0 120 51.7
Cfa019219 Carpinus fangiana HOM05D007505 ORTHO05D009476 4.5e-25 118.6 118 54.2
TWI23G0126 Tripterygium wilfordii HOM05D007505 ORTHO05D009476 4.5e-25 118.6 117 52.1
Cfa019221 Carpinus fangiana HOM05D007505 ORTHO05D009476 7.6e-25 117.9 117 54.7
Solyc03g112190.4 Solanum lycopersicum HOM05D002460 ORTHO05D002716 9.9e-25 117.5 117 51.3
Haze_07589 Corylus avellana HOM05D007505 ORTHO05D009476 1.3e-24 117.1 118 53.4
Sopen03g031290 Solanum pennellii HOM05D007505 ORTHO05D009476 1.7e-24 116.7 117 51.3
Prupe.5G165400 Prunus persica HOM05D007505 ORTHO05D009476 4.9e-24 115.2 120 55.8
PGSC0003DMG400018186 Solanum tuberosum HOM05D007505 ORTHO05D009476 8.4e-24 114.4 117 49.6
COL.COLO4_36758 Corchorus olitorius HOM05D007505 ORTHO05D009476 4.2e-23 112.1 138 50.7
Actinidia19362 Actinidia chinensis HOM05D007505 ORTHO05D009476 1.2e-22 110.5 115 53.0
Dinv38525 Davidia involucrata HOM05D007505 ORTHO05D009476 1.2e-22 110.5 126 54.8
Phvul.003G205200 Phaseolus vulgaris HOM05D007505 ORTHO05D009476 1.2e-22 110.5 130 41.5
QL10p006874 Quercus lobata HOM05D007505 ORTHO05D009476 1.2e-22 110.5 137 50.4
TAR371G0969 Trochodendron aralioides HOM05D007505 ORTHO05D009476 1.6e-22 110.2 117 53.8
Atru.chr9.2580 Acer truncatum HOM05D007505 ORTHO05D009476 2.1e-22 109.8 102 55.9
Nitab4.5_0000003g0840 Nicotiana tabacum HOM05D007505 ORTHO05D009476 2.1e-22 109.8 112 53.6
VMungo1215G0926 Vigna mungo HOM05D007505 ORTHO05D009476 2.7e-22 109.4 113 44.2
Cc04_g11490 Coffea canephora HOM05D007505 ORTHO05D009476 3.5e-22 109.0 116 50.0
Gohir.D03G109300 Gossypium hirsutum HOM05D007505 ORTHO05D009476 4.6e-22 108.6 127 48.8
Gorai.003G115400 Gossypium raimondii HOM05D007505 ORTHO05D009476 6.0e-22 108.2 127 48.0
Lalb_Chr12g0201901 Lupinus albus HOM05D007505 ORTHO05D009476 6.0e-22 108.2 127 46.5
Gohir.A03G057100 Gossypium hirsutum HOM05D007505 ORTHO05D009476 7.9e-22 107.8 127 48.0
ClCG03G003000 Citrullus lanatus HOM05D007505 ORTHO05D009476 1.8e-21 106.7 117 53.8
vmacro19295 Vaccinium macrocarpon HOM05D007505 ORTHO05D009476 1.8e-21 106.7 129 52.7
Nitab4.5_0008713g0030 Nicotiana tabacum HOM05D007505 ORTHO05D009476 2.3e-21 106.3 116 52.6
Hma1.2p1_0046F.1_g027150 Hydrangea macrophylla HOM05D007505 ORTHO05D009476 3.0e-21 105.9 126 50.8
Nitab4.5_0001793g0050 Nicotiana tabacum HOM05D002460 ORTHO05D002716 3.9e-21 105.5 94 56.4
CSS0021026 Camellia sinensis var. sinensis HOM05D007505 ORTHO05D009476 5.1e-21 105.1 116 51.7
FvH4_5g06310 Fragaria vesca HOM05D007505 ORTHO05D009476 6.7e-21 104.8 120 51.7
RcHm_v2.0_Chr7g0192551 Rosa chinensis HOM05D007505 ORTHO05D009476 6.7e-21 104.8 120 51.7
MD14G1171300 Malus domestica HOM05D007505 ORTHO05D009476 8.7e-21 104.4 119 51.3
FAN18G1005 Fragaria x ananassa HOM05D007505 ORTHO05D009476 1.5e-20 103.6 120 51.7
Glyma.05G041700 Glycine max HOM05D007505 ORTHO05D009476 1.5e-20 103.6 104 46.2
Oeu023645.1 Olea europaea HOM05D007505 ORTHO05D009476 1.5e-20 103.6 109 52.3
FAN08G0495 Fragaria x ananassa HOM05D007505 ORTHO05D009476 1.9e-20 103.2 120 51.7
Glyma.17G084500 Glycine max HOM05D007505 ORTHO05D009476 2.5e-20 102.8 112 48.2
Oeu040858.1 Olea europaea HOM05D007505 ORTHO05D009476 4.3e-20 102.1 113 49.6
Rhsim12G0168000 Rhododendron simsii HOM05D007505 ORTHO05D009476 4.3e-20 102.1 137 46.0
MD06G1165700 Malus domestica HOM05D007505 ORTHO05D009476 1.3e-19 100.5 116 51.7
Lj4g0014699 Lotus japonicus HOM05D007505 ORTHO05D009476 1.6e-19 100.1 104 50.0
Medtr4g104870 Medicago truncatula HOM05D007505 ORTHO05D009476 1.6e-19 100.1 119 47.1
Nn3g16691 Nelumbo nucifera HOM05D007505 ORTHO05D009476 1.6e-19 100.1 102 53.9
Migut.O00159 Erythranthe guttata HOM05D007505 ORTHO05D009476 2.1e-19 99.8 130 40.0
MELO3C002298.2 Cucumis melo HOM05D007505 ORTHO05D009476 2.8e-19 99.4 120 53.3
Eucgr.B00218 Eucalyptus grandis HOM05D007505 ORTHO05D009476 2.8e-19 99.4 125 46.4
Rhsim08G0177900 Rhododendron simsii HOM05D007505 ORTHO05D009476 2.8e-19 99.4 129 48.1
ECA247G3499 Erigeron canadensis HOM05D007505 ORTHO05D009476 6.2e-19 98.2 122 46.7
FAN13G2123 Fragaria x ananassa HOM05D007505 ORTHO05D009476 6.2e-19 98.2 120 50.0
DCAR_021591 Daucus carota HOM05D007505 ORTHO05D009476 8.1e-19 97.8 115 49.6
Sed0000715 Sechium edule HOM05D007505 ORTHO05D009476 8.1e-19 97.8 115 49.6
PSO675G7842 Papaver somniferum HOM05D007505 ORTHO05D009476 1.1e-18 97.4 120 43.3
PGR083G2149 Punica granatum HOM05D007505 ORTHO05D009476 1.1e-18 97.4 114 48.2
PSO541G6268 Papaver somniferum HOM05D007505 ORTHO05D009476 1.8e-18 96.7 120 42.5
CiPaw.11G019500 Carya illinoinensis HOM05D007505 ORTHO05D009476 2.4e-18 96.3 116 48.3
TAR629G2155 Trochodendron aralioides HOM05D001124 ORTHO05D001004 2.4e-18 96.3 101 54.5
Psat4g060840 Pisum sativum HOM05D007505 ORTHO05D009476 5.3e-18 95.1 119 45.4
TPR.G37551 Trifolium pratense HOM05D007505 ORTHO05D009476 2.0e-17 93.2 122 45.1
SalBow5G2951 Salvia bowleyana HOM05D007505 ORTHO05D009476 4.5e-17 92.0 101 54.5
MBI16_g31776_MAGBIO Magnolia biondii HOM05D007505 ORTHO05D009476 7.6e-17 91.3 133 44.4
arahy.Tifrunner.gnm1.ann1.33YNZL Arachis hypogaea HOM05D007505 ORTHO05D009476 1.3e-16 90.5 104 47.1
SGA_v2.0_scaffold90G27839 Striga asiatica HOM05D007505 ORTHO05D009476 1.3e-16 90.5 117 47.9
HanXRQChr02g0035811 Helianthus annuus HOM05D007505 ORTHO05D009476 1.7e-16 90.1 133 41.4
CsaV3_1G008840 Cucumis sativus L. HOM05D007505 ORTHO05D009476 2.2e-16 89.7 118 48.3
Sc04g0001500 Simmondsia chinensis HOM05D007505 ORTHO05D009476 8.4e-16 87.8 102 49.0
EL10Ac5g10655 Beta vulgaris HOM05D007505 ORTHO05D009476 1.1e-15 87.4 109 46.8
AUR62028725 Chenopodium quinoa HOM05D007505 ORTHO05D009476 1.1e-15 87.4 119 45.4
CANSAT80G2368 Cannabis sativa HOM05D007505 ORTHO05D009476 4.2e-15 85.5 128 42.2
Dinv20598 Davidia involucrata HOM05D007505 ORTHO05D009476 5.5e-15 85.1 67 65.7
Lsat_1_v5_gn_1_27760 Lactuca sativa HOM05D007505 ORTHO05D009476 5.5e-15 85.1 118 44.1
unitig_61.g26472 Utricularia gibba HOM05D007505 ORTHO05D009476 5.5e-15 85.1 109 42.2
AUR62008143 Chenopodium quinoa HOM05D007505 ORTHO05D009476 6.0e-14 81.6 119 42.9
Hma1.2p1_1092F.1_g255960 Hydrangea macrophylla HOM05D007505 ORTHO05D009476 1.1e-12 77.4 75 52.0
THA.LOC104825178 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 7.4e-12 74.7 99 43.4
BraA03t14621Z Brassica rapa HOM05D000464 ORTHO05D000408 9.6e-12 74.3 119 36.1
Nn4g22591 Nelumbo nucifera HOM05D007505 ORTHO05D009476 2.8e-11 72.8 106 46.2
THA.LOC104800396 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 6.2e-11 71.6 98 43.9
THA.LOC104800397 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 6.2e-11 71.6 98 43.9
BolC7t45867H Brassica oleracea HOM05D000464 ORTHO05D000408 8.1e-11 71.2 106 37.7
ATR0824G199 Amborella trichopoda HOM05D007505 ORTHO05D009476 1.1e-10 70.9 77 53.2
AT4G24700 Arabidopsis thaliana HOM05D007505 ORTHO05D009476 1.1e-10 70.9 106 44.3
BcaNung07358 Brassica carinata HOM05D007505 ORTHO05D009476 1.1e-10 70.9 118 36.4
Carub.0007s1636 Capsella rubella HOM05D007505 ORTHO05D009476 6.9e-10 68.2 102 41.2
A03p55480 Brassica napus HOM05D007505 ORTHO05D009476 1.5e-09 67.0 88 40.9
C01p20030 Brassica napus HOM05D006209 ORTHO05D007645 1.5e-09 67.0 107 38.3
AL7G28500 Arabidopsis lyrata HOM05D007505 ORTHO05D009476 2.0e-09 66.6 125 36.8
BcaC09g50839 Brassica carinata HOM05D007505 ORTHO05D009476 2.0e-09 66.6 107 38.3
A01p16040 Brassica napus HOM05D006209 ORTHO05D007645 2.0e-09 66.6 107 38.3
BraA01t01538Z Brassica rapa HOM05D007505 ORTHO05D009476 2.6e-09 66.2 126 34.9
HPP92_004606 Vanilla planifolia HOM05D007505 ORTHO05D009476 2.6e-09 66.2 78 50.0
BolC1t01930H Brassica oleracea HOM05D006209 ORTHO05D007645 3.4e-09 65.9 107 38.3
Duzib068G0261 Durio zibethinus HOM05D007505 ORTHO05D009476 5.8e-09 65.1 61 52.5
CARHR232080 Cardamine hirsuta HOM05D007505 ORTHO05D009476 1.7e-08 63.5 105 38.1
Thhalv10026466m.g Eutrema salsugineum HOM05D007505 ORTHO05D009476 8.4e-08 61.2 114 36.0
Zm00001eb246040 Zea mays HOM05D007505 ORTHO05D009476 6.0e-06 55.1 94 37.2
Os02g0595200 Oryza sativa ssp. japonica HOM05D007505 ORTHO05D009476 7.9e-06 54.7 114 36.0


User provided reference genes

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