Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra12G0059300 Salix brachista HOM05D003318 ORTHO05D029670 1.8e-58 229.2 127 100.0
Potri.012G082700 Populus trichocarpa HOM05D003318 ORTHO05D004544 3.8e-40 168.3 128 82.0
Potri.015G078801 Populus trichocarpa HOM05D003318 ORTHO05D029670 5.1e-37 157.9 128 75.0
Sabra15G0103300 Salix brachista HOM05D003318 ORTHO05D004544 1.1e-36 156.8 128 75.8
CSS0041520 Camellia sinensis var. sinensis HOM05D003318 ORTHO05D004544 1.6e-19 99.8 86 67.4
CiPaw.11G024300 Carya illinoinensis HOM05D003318 ORTHO05D004544 6.9e-18 94.4 117 49.6
Dinv38569 Davidia involucrata HOM05D003318 ORTHO05D004544 1.2e-17 93.6 104 57.7
PGR083G1815 Punica granatum HOM05D003318 ORTHO05D004544 1.2e-17 93.6 80 70.0
Dinv20635 Davidia involucrata HOM05D003318 ORTHO05D004544 1.5e-17 93.2 112 56.2
TWI14G1066 Tripterygium wilfordii HOM05D003318 ORTHO05D004544 2.6e-17 92.4 112 56.2
vmacro19403 Vaccinium macrocarpon HOM05D003318 ORTHO05D004544 2.6e-17 92.4 92 57.6
Duzib205G1868 Durio zibethinus HOM05D003318 ORTHO05D004544 1.3e-16 90.1 118 50.8
Thecc.03G014800 Theobroma cacao HOM05D003318 ORTHO05D004544 2.2e-16 89.4 119 52.1
THA.LOC104820782 Tarenaya hassleriana HOM05D003318 ORTHO05D004544 2.9e-16 89.0 63 73.0
Rhsim08G0174000 Rhododendron simsii HOM05D003318 ORTHO05D004544 3.8e-16 88.6 81 64.2
Cfa019154 Carpinus fangiana HOM05D003318 ORTHO05D004544 5.0e-16 88.2 90 54.4
QL11p012704 Quercus lobata HOM05D003318 ORTHO05D004544 5.0e-16 88.2 93 59.1
Actinidia33079 Actinidia chinensis HOM05D003318 ORTHO05D004544 6.5e-16 87.8 105 51.4
Hma1.2p1_2568F.1_g324540 Hydrangea macrophylla HOM05D003318 ORTHO05D004544 8.5e-16 87.4 74 63.5
Lj5A126T76 Lonicera japonica HOM05D003318 ORTHO05D004544 8.5e-16 87.4 95 57.9
QL08p043380 Quercus lobata HOM05D003318 ORTHO05D004544 8.5e-16 87.4 75 66.7
RcHm_v2.0_Chr7g0193331 Rosa chinensis HOM05D003318 ORTHO05D004544 8.5e-16 87.4 110 52.7
Hund02756 Selenicereus undatus HOM05D003318 ORTHO05D004544 1.1e-15 87.0 78 61.5
A02p04620 Brassica napus HOM05D003318 ORTHO05D004544 1.4e-15 86.7 88 56.8
Cfa019115 Carpinus fangiana HOM05D003318 ORTHO05D004544 1.4e-15 86.7 90 53.3
BcaC03g13562 Brassica carinata HOM05D003318 ORTHO05D004544 2.5e-15 85.9 58 75.9
C02p09560 Brassica napus HOM05D003318 ORTHO05D004544 2.5e-15 85.9 58 75.9
BraA02t05423Z Brassica rapa HOM05D003318 ORTHO05D004544 2.5e-15 85.9 58 77.6
CiPaw.12G028100 Carya illinoinensis HOM05D003318 ORTHO05D004544 2.5e-15 85.9 118 50.8
Haze_07523 Corylus avellana HOM05D003318 ORTHO05D004544 2.5e-15 85.9 90 52.2
Gohir.D12G275900 Gossypium hirsutum HOM05D003318 ORTHO05D004544 2.5e-15 85.9 82 64.6
Gorai.008G296400 Gossypium raimondii HOM05D003318 ORTHO05D004544 2.5e-15 85.9 82 64.6
TAR374G0007 Trochodendron aralioides HOM05D003318 ORTHO05D004544 2.5e-15 85.9 103 56.3
TAR622G0444 Trochodendron aralioides HOM05D003318 ORTHO05D004544 2.5e-15 85.9 59 74.6
TAR629G1623 Trochodendron aralioides HOM05D003318 ORTHO05D004544 2.5e-15 85.9 102 55.9
ClCG01G013250 Citrullus lanatus HOM05D003318 ORTHO05D004544 3.2e-15 85.5 70 70.0
Eucgr.B00293 Eucalyptus grandis HOM05D003318 ORTHO05D004544 3.2e-15 85.5 79 63.3
MBI16_g39220_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D004544 3.2e-15 85.5 109 49.5
BraA10t44214Z Brassica rapa HOM05D003318 ORTHO05D004544 4.2e-15 85.1 77 63.6
BolC2t06863H Brassica oleracea HOM05D003318 ORTHO05D004544 5.5e-15 84.7 58 75.9
Thhalv10013530m.g Eutrema salsugineum HOM05D003318 ORTHO05D004544 5.5e-15 84.7 68 66.2
RcHm_v2.0_Chr6g0263051 Rosa chinensis HOM05D003318 ORTHO05D029670 5.5e-15 84.7 118 50.8
RcHm_v2.0_Chr6g0263071 Rosa chinensis HOM05D003318 ORTHO05D004544 5.5e-15 84.7 118 50.8
Cpa.g.sc928.1 Carica papaya HOM05D003318 ORTHO05D004544 7.2e-15 84.3 63 71.4
MELO3C002275.2 Cucumis melo HOM05D003318 ORTHO05D004544 7.2e-15 84.3 79 64.6
Gohir.A12G275200 Gossypium hirsutum HOM05D003318 ORTHO05D004544 7.2e-15 84.3 82 63.4
Migut.O00115 Erythranthe guttata HOM05D003318 ORTHO05D004544 1.2e-14 83.6 61 75.4
FvH4_5g05490 Fragaria vesca HOM05D003318 ORTHO05D004544 1.2e-14 83.6 116 52.6
FAN18G0175 Fragaria x ananassa HOM05D003318 ORTHO05D004544 1.2e-14 83.6 116 52.6
CANSAT80G1582 Cannabis sativa HOM05D003318 ORTHO05D004544 1.6e-14 83.2 97 55.7
Aa31LG5G14350 Aethionema arabicum HOM05D003318 ORTHO05D004544 2.1e-14 82.8 58 74.1
BcaB08g36721 Brassica carinata HOM05D003318 ORTHO05D004544 2.7e-14 82.4 77 57.1
Cc04_g12170 Coffea canephora HOM05D003318 ORTHO05D004544 2.7e-14 82.4 114 46.5
CsaV3_1G008610 Cucumis sativus L. HOM05D003318 ORTHO05D004544 2.7e-14 82.4 66 69.7
Nitab4.5_0006198g0010 Nicotiana tabacum HOM05D003318 ORTHO05D004544 2.7e-14 82.4 78 60.3
A10p21530 Brassica napus HOM05D003318 ORTHO05D004544 4.6e-14 81.6 68 63.2
DCAR_016479 Daucus carota HOM05D003318 ORTHO05D004544 4.6e-14 81.6 85 61.2
GSVIVG01007720001 Vitis vinifera HOM05D003318 ORTHO05D004544 4.6e-14 81.6 52 80.8
Aa31LG11G11520 Aethionema arabicum HOM05D003318 ORTHO05D004544 6.1e-14 81.3 62 66.1
AT5G17990 Arabidopsis thaliana HOM05D003318 ORTHO05D004544 6.1e-14 81.3 70 60.0
MD06G1172000 Malus domestica HOM05D003318 ORTHO05D004544 6.1e-14 81.3 117 47.0
BcaC04g18737 Brassica carinata HOM05D003318 ORTHO05D004544 7.9e-14 80.9 72 59.7
C09p59000 Brassica napus HOM05D003318 ORTHO05D004544 7.9e-14 80.9 72 59.7
BolC9t58746H Brassica oleracea HOM05D003318 ORTHO05D004544 7.9e-14 80.9 72 59.7
FAN04G1614 Fragaria x ananassa HOM05D003318 ORTHO05D004544 7.9e-14 80.9 116 51.7
FAN18G0002 Fragaria x ananassa HOM05D003318 ORTHO05D004544 7.9e-14 80.9 110 50.0
Manes.06G106300 Manihot esculenta HOM05D003318 ORTHO05D004544 7.9e-14 80.9 73 68.5
HPP92_007429 Vanilla planifolia HOM05D003318 ORTHO05D004544 7.9e-14 80.9 72 66.7
MSTRG.11467 Avicennia marina HOM05D003318 ORTHO05D004544 1.0e-13 80.5 76 67.1
AL6G29090 Arabidopsis lyrata HOM05D003318 ORTHO05D004544 1.4e-13 80.1 70 60.0
Carub.0006s1618 Capsella rubella HOM05D003318 ORTHO05D004544 1.8e-13 79.7 89 52.8
Ciclev10020016m.g Citrus clementina HOM05D003318 ORTHO05D004544 1.8e-13 79.7 63 66.7
Aqoxy1G03320 Aquilegia oxysepala HOM05D003318 ORTHO05D004544 2.3e-13 79.3 68 63.2
MD14G1177900 Malus domestica HOM05D003318 ORTHO05D004544 2.3e-13 79.3 120 47.5
Sp6g26300 Schrenkiella parvula HOM05D003318 ORTHO05D004544 2.3e-13 79.3 91 50.5
Ah.02g110590 Amaranthus hybridus HOM05D003318 ORTHO05D004544 3.0e-13 79.0 78 62.8
Nitab4.5_0000003g0690 Nicotiana tabacum HOM05D003318 ORTHO05D004544 3.0e-13 79.0 72 62.5
Aqoxy3G01070 Aquilegia oxysepala HOM05D003318 ORTHO05D004544 3.9e-13 78.6 113 47.8
unitig_61.g26476 Utricularia gibba HOM05D003318 ORTHO05D004544 3.9e-13 78.6 88 58.0
MBI10_g27994_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D004544 5.1e-13 78.2 76 61.8
Solyc06g071550.3 Solanum lycopersicum HOM05D003318 ORTHO05D004544 5.1e-13 78.2 72 62.5
Sed0002340 Sechium edule HOM05D003318 ORTHO05D004544 6.7e-13 77.8 71 64.8
SGA_v2.0_scaffold116G32230 Striga asiatica HOM05D003318 ORTHO05D004544 6.7e-13 77.8 52 78.8
SGA_v2.0_scaffold90G27893 Striga asiatica HOM05D003318 ORTHO05D004544 6.7e-13 77.8 52 78.8
CDE07G1695 Ceratophyllum demersum HOM05D003318 ORTHO05D004544 8.8e-13 77.4 59 72.9
PSO478G3254 Papaver somniferum HOM05D003318 ORTHO05D004544 8.8e-13 77.4 114 46.5
Sopen06g027840 Solanum pennellii HOM05D003318 ORTHO05D004544 8.8e-13 77.4 72 62.5
PGSC0003DMG402027084 Solanum tuberosum HOM05D003318 ORTHO05D004544 8.8e-13 77.4 72 62.5
BcaB05g23318 Brassica carinata HOM05D003318 ORTHO05D004544 1.1e-12 77.0 48 83.3
PSO017G3133 Papaver somniferum HOM05D003318 ORTHO05D004544 1.1e-12 77.0 114 46.5
arahy.Tifrunner.gnm1.ann1.GNW9LV Arachis hypogaea HOM05D003318 ORTHO05D004544 1.5e-12 76.6 73 61.6
Hma1.2p1_0592F.1_g185485 Hydrangea macrophylla HOM05D003318 ORTHO05D004544 1.5e-12 76.6 48 83.3
Nitab4.5_0001659g0170 Nicotiana tabacum HOM05D003318 ORTHO05D004544 1.5e-12 76.6 78 57.7
Oeu023437.2 Olea europaea HOM05D003318 ORTHO05D004544 1.5e-12 76.6 70 62.9
Sed0012780 Sechium edule HOM05D003318 ORTHO05D004544 1.5e-12 76.6 67 70.1
arahy.Tifrunner.gnm1.ann1.XU68ZZ Arachis hypogaea HOM05D003318 ORTHO05D004544 1.9e-12 76.3 73 60.3
MSTRG.23140 Avicennia marina HOM05D003318 ORTHO05D004544 1.9e-12 76.3 90 52.2
MBI10_g40111_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D004544 1.9e-12 76.3 76 60.5
Prupe.5G171400 Prunus persica HOM05D003318 ORTHO05D004544 1.9e-12 76.3 112 50.9
Nn4g22710 Nelumbo nucifera HOM05D003318 ORTHO05D004544 3.3e-12 75.5 127 45.7
CAN.G1166.8 Capsicum annuum HOM05D003318 ORTHO05D004544 4.3e-12 75.1 71 60.6
CAN.G2085.3 Capsicum annuum HOM05D003318 ORTHO05D004544 5.7e-12 74.7 56 71.4
SalBow5G2274 Salvia bowleyana HOM05D003318 ORTHO05D004544 5.7e-12 74.7 48 83.3
ATR1091G089 Amborella trichopoda HOM05D003318 ORTHO05D004544 7.4e-12 74.3 57 68.4
EL10Ac5g10728 Beta vulgaris HOM05D003318 ORTHO05D004544 7.4e-12 74.3 75 61.3
ECA247G3283 Erigeron canadensis HOM05D003318 ORTHO05D004544 7.4e-12 74.3 77 55.8
Lsat_1_v5_gn_1_28341 Lactuca sativa HOM05D003318 ORTHO05D004544 7.4e-12 74.3 58 67.2
Aqoxy248s001 Aquilegia oxysepala HOM05D003318 ORTHO05D004544 1.3e-11 73.6 48 79.2
Oeu016410.1 Olea europaea HOM05D003318 ORTHO05D004544 1.3e-11 73.6 61 67.2
AL3G45680 Arabidopsis lyrata HOM05D003318 ORTHO05D004544 1.7e-11 73.2 56 69.6
VMungo1309G2893 Vigna mungo HOM05D003318 ORTHO05D004544 1.7e-11 73.2 86 51.2
Dinv33471 Davidia involucrata HOM05D003318 ORTHO05D004544 2.2e-11 72.8 54 68.5
PGSC0003DMG400031392 Solanum tuberosum HOM05D003318 ORTHO05D004544 2.2e-11 72.8 49 77.6
AUR62030944 Chenopodium quinoa HOM05D003318 ORTHO05D004544 2.8e-11 72.4 52 69.2
COL.COLO4_30076 Corchorus olitorius HOM05D003318 ORTHO05D004544 2.8e-11 72.4 72 61.1
Migut.H00094 Erythranthe guttata HOM05D003318 ORTHO05D004544 2.8e-11 72.4 56 69.6
Dinv35091 Davidia involucrata HOM05D003318 ORTHO05D004544 3.7e-11 72.0 85 55.3
Lj1g0000906 Lotus japonicus HOM05D003318 ORTHO05D004544 4.8e-11 71.6 73 60.3
Hma1.2p1_0993F.1_g245293 Hydrangea macrophylla HOM05D003318 ORTHO05D004544 6.3e-11 71.2 87 50.6
Hma1.2p1_0999F.1_g246340 Hydrangea macrophylla HOM05D003318 ORTHO05D004544 6.3e-11 71.2 87 50.6
MBI02_g17816_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D011024 6.3e-11 71.2 53 71.7
Psat0ss3962g0480 Pisum sativum HOM05D003318 ORTHO05D004544 6.3e-11 71.2 82 53.7
Peaxi162Scf00700g00534 Petunia axillaris HOM05D003318 ORTHO05D004544 8.2e-11 70.9 54 66.7
Phvul.009G177200 Phaseolus vulgaris HOM05D003318 ORTHO05D004544 8.2e-11 70.9 86 50.0
Nitab4.5_0002306g0030 Nicotiana tabacum HOM05D003318 ORTHO05D004544 1.1e-10 70.5 94 45.7
vmacro05848 Vaccinium macrocarpon HOM05D003318 ORTHO05D004544 1.1e-10 70.5 49 75.5
AUR62008192 Chenopodium quinoa HOM05D003318 ORTHO05D004544 1.4e-10 70.1 70 54.3
HanXRQChr09g0251391 Helianthus annuus HOM05D003318 ORTHO05D004544 1.4e-10 70.1 65 58.5
SalBow1G7854 Salvia bowleyana HOM05D003318 ORTHO05D004544 1.4e-10 70.1 49 73.5
Solyc12g035190.2 Solanum lycopersicum HOM05D003318 ORTHO05D004544 1.8e-10 69.7 49 73.5
GSVIVG01032439001 Vitis vinifera HOM05D003318 ORTHO05D004544 1.8e-10 69.7 74 55.4
Lj7A595G62 Lonicera japonica HOM05D003318 ORTHO05D004544 2.4e-10 69.3 49 73.5
Lalb_Chr08g0236611 Lupinus albus HOM05D003318 ORTHO05D004544 3.1e-10 68.9 80 55.0
Rhsim10G0019100 Rhododendron simsii HOM05D003318 ORTHO05D004544 4.1e-10 68.6 54 63.0
Sopen12g014750 Solanum pennellii HOM05D003318 ORTHO05D004544 4.1e-10 68.6 47 76.6
Lsat_1_v5_gn_4_183240 Lactuca sativa HOM05D003318 ORTHO05D004544 5.3e-10 68.2 88 48.9
Medtr3g077590 Medicago truncatula HOM05D003318 ORTHO05D004544 5.3e-10 68.2 72 55.6
Ah.11g051490 Amaranthus hybridus HOM05D003318 ORTHO05D004544 6.9e-10 67.8 121 44.6
CARHR154460 Cardamine hirsuta HOM05D003318 ORTHO05D011024 9.1e-10 67.4 48 75.0
Peaxi162Scf00689g00118 Petunia axillaris HOM05D003318 ORTHO05D004544 1.2e-09 67.0 49 73.5
MSTRG.24028 Avicennia marina HOM05D003318 ORTHO05D004544 1.5e-09 66.6 105 45.7
ECA232G1303 Erigeron canadensis HOM05D000957 ORTHO05D000754 1.5e-09 66.6 49 71.4
SGA_v2.0_scaffold481G52331 Striga asiatica HOM05D003318 ORTHO05D004544 2.0e-09 66.2 92 52.2
HanXRQChr09g0254931 Helianthus annuus HOM05D003318 ORTHO05D004544 4.5e-09 65.1 54 64.8
Zm00001eb403640 Zea mays HOM05D003318 ORTHO05D004544 4.5e-09 65.1 57 59.6
Actinidia36099 Actinidia chinensis HOM05D003318 ORTHO05D004544 5.9e-09 64.7 119 44.5
Cc07_g01950 Coffea canephora HOM05D003318 ORTHO05D004544 5.9e-09 64.7 87 52.9
Glyma.04G184900 Glycine max HOM05D003318 ORTHO05D004544 5.9e-09 64.7 86 46.5
SHI00282 Sapria himalayana HOM05D003318 ORTHO05D004544 5.9e-09 64.7 49 69.4
Ca_16165_v3 Cicer arietinum L. HOM05D003318 ORTHO05D004544 7.7e-09 64.3 117 42.7
DCAR_021707 Daucus carota HOM05D003318 ORTHO05D004544 3.8e-08 62.0 109 43.1
Nitab4.5_0002643g0020 Nicotiana tabacum HOM05D003318 ORTHO05D004544 1.1e-07 60.5 85 48.2
AagrBONN_evm.TU.Sc2ySwM_362.2078 Anthoceros agrestis HOM05D003318 ORTHO05D004544 2.5e-07 59.3 62 53.2
CARHR195080 Cardamine hirsuta HOM05D003318 ORTHO05D004544 7.2e-07 57.8 36 80.6
Mapoly0027s0124 Marchantia polymorpha HOM05D003318 ORTHO05D004544 9.4e-07 57.4 73 46.6
Nn3g16817 Nelumbo nucifera HOM05D003318 ORTHO05D004544 2.1e-06 56.2 42 69.0
Os03g0126000 Oryza sativa ssp. japonica HOM05D003318 ORTHO05D004544 2.1e-06 56.2 65 47.7
MBI06_g16692_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D008292 7.9e-06 54.3 40 72.5


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