Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra12G0058900 Salix brachista HOM05D006234 ORTHO05D007813 4.8e-144 514.6 287 100.0
Potri.012G082300 Populus trichocarpa HOM05D006234 ORTHO05D007813 2.7e-134 482.3 287 92.3
Potri.015G078100 Populus trichocarpa HOM05D006234 ORTHO05D007813 2.4e-119 432.6 289 86.9
Sabra15G0102700 Salix brachista HOM05D006234 ORTHO05D007813 3.4e-113 412.1 309 77.0
Manes.14G064600 Manihot esculenta HOM05D006234 ORTHO05D007813 2.9e-104 382.5 284 78.2
Cfa019148 Carpinus fangiana HOM05D006234 ORTHO05D007813 3.4e-97 359.0 287 77.7
Haze_07514 Corylus avellana HOM05D006234 ORTHO05D007813 7.6e-97 357.8 287 76.7
Lj9A446T64 Lonicera japonica HOM05D006234 ORTHO05D007813 1.3e-96 357.1 291 73.5
CSS0048541 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 1.7e-96 356.7 297 69.0
CANSAT80G1835 Cannabis sativa HOM05D006234 ORTHO05D007813 2.2e-96 356.3 301 72.1
COL.COLO4_30066 Corchorus olitorius HOM05D006234 ORTHO05D007813 2.2e-96 356.3 304 67.1
CSS0047520 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 2.9e-96 355.9 297 69.0
Thecc.03G014200 Theobroma cacao HOM05D006234 ORTHO05D007813 4.9e-96 355.1 304 74.3
CiPaw.12G027800 Carya illinoinensis HOM05D006234 ORTHO05D007813 1.1e-95 354.0 288 72.6
GSVIVG01007727001 Vitis vinifera HOM05D006234 ORTHO05D007813 1.1e-95 354.0 287 70.4
QL10p010716 Quercus lobata HOM05D006234 ORTHO05D007813 1.4e-95 353.6 295 74.2
Rhsim12G0165600 Rhododendron simsii HOM05D006234 ORTHO05D007813 1.9e-95 353.2 288 69.8
Cc04_g12080 Coffea canephora HOM05D006234 ORTHO05D007813 2.4e-95 352.8 304 69.7
Gohir.A12G274800 Gossypium hirsutum HOM05D006234 ORTHO05D007813 2.4e-95 352.8 299 68.6
Gohir.D12G275500 Gossypium hirsutum HOM05D006234 ORTHO05D007813 2.4e-95 352.8 292 69.2
Gorai.008G296000 Gossypium raimondii HOM05D006234 ORTHO05D007813 3.2e-95 352.4 292 69.2
Eucgr.K02833 Eucalyptus grandis HOM05D006234 ORTHO05D007813 5.4e-95 351.7 298 66.4
Hma1.2p1_0592F.1_g185420 Hydrangea macrophylla HOM05D006234 ORTHO05D007813 1.2e-94 350.5 278 70.1
PGR044G0892 Punica granatum HOM05D006234 ORTHO05D007813 1.6e-94 350.1 295 68.8
Nitab4.5_0000025g0560 Nicotiana tabacum HOM05D006234 ORTHO05D007813 4.6e-94 348.6 283 68.6
QL10p011029 Quercus lobata HOM05D006234 ORTHO05D007813 3.0e-93 345.9 299 72.9
Sed0024030 Sechium edule HOM05D006234 ORTHO05D007813 1.9e-92 343.2 294 72.1
Hund09446 Selenicereus undatus HOM05D006234 ORTHO05D007813 2.5e-92 342.8 300 64.3
Nn4g22716 Nelumbo nucifera HOM05D006234 ORTHO05D007813 4.3e-92 342.0 280 70.7
MD14G1178600 Malus domestica HOM05D006234 ORTHO05D007813 9.6e-92 340.9 291 68.7
MELO3C002271.2 Cucumis melo HOM05D006234 ORTHO05D007813 1.6e-91 340.1 290 71.4
AUR62030948 Chenopodium quinoa HOM05D006234 ORTHO05D007813 2.1e-91 339.7 297 63.6
CsaV3_1G008570 Cucumis sativus L. HOM05D006234 ORTHO05D007813 2.1e-91 339.7 290 71.4
RcHm_v2.0_Chr7g0193391 Rosa chinensis HOM05D006234 ORTHO05D007813 2.8e-91 339.3 290 72.1
Oeu020907.1 Olea europaea HOM05D006234 ORTHO05D007813 4.8e-91 338.6 295 70.2
Atru.chr9.2492 Acer truncatum HOM05D006234 ORTHO05D007813 6.2e-91 338.2 213 77.0
vmacro16618 Vaccinium macrocarpon HOM05D006234 ORTHO05D007813 1.1e-90 337.4 315 61.9
FvH4_5g05440 Fragaria vesca HOM05D006234 ORTHO05D007813 1.4e-90 337.0 281 73.0
FAN18G0739 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.4e-90 337.0 281 73.0
MD06G1172700 Malus domestica HOM05D006234 ORTHO05D007813 1.8e-90 336.7 298 67.8
EL10Ac5g10733 Beta vulgaris HOM05D006234 ORTHO05D007813 2.4e-90 336.3 292 61.6
FAN04G0097 Fragaria x ananassa HOM05D006234 ORTHO05D007813 3.1e-90 335.9 285 69.8
Sc10g0010120 Simmondsia chinensis HOM05D006234 ORTHO05D007813 3.1e-90 335.9 244 74.2
Sopen12g011710 Solanum pennellii HOM05D006234 ORTHO05D007813 3.1e-90 335.9 217 77.0
FAN18G3270 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.2e-89 334.0 281 72.6
arahy.Tifrunner.gnm1.ann1.ZL3RZ2 Arachis hypogaea HOM05D006234 ORTHO05D007813 3.4e-89 332.4 246 75.6
Migut.O00096 Erythranthe guttata HOM05D006234 ORTHO05D007813 4.5e-89 332.0 287 72.1
arahy.Tifrunner.gnm1.ann1.I5PLYK Arachis hypogaea HOM05D006234 ORTHO05D007813 7.6e-89 331.3 246 75.6
Lsat_1_v5_gn_5_15020 Lactuca sativa HOM05D006234 ORTHO05D007813 7.6e-89 331.3 288 69.4
Nitab4.5_0001514g0060 Nicotiana tabacum HOM05D006234 ORTHO05D007813 7.6e-89 331.3 287 65.9
Hund02751 Selenicereus undatus HOM05D006234 ORTHO05D007813 1.3e-88 330.5 302 60.9
Ah.02g110560 Amaranthus hybridus HOM05D006234 ORTHO05D007813 1.4e-87 327.0 301 65.8
Peaxi162Scf00255g01121 Petunia axillaris HOM05D006234 ORTHO05D007813 1.4e-87 327.0 277 61.7
Glyma.17G088400 Glycine max HOM05D006234 ORTHO05D007813 5.4e-87 325.1 283 61.8
FAN08G0279 Fragaria x ananassa HOM05D006234 ORTHO05D007813 7.1e-87 324.7 295 62.7
SGA_v2.0_scaffold90G27902 Striga asiatica HOM05D006234 ORTHO05D007813 1.2e-86 323.9 283 62.9
Glyma.05G038600 Glycine max HOM05D006234 ORTHO05D007813 1.6e-86 323.6 240 68.3
Manes.06G106000 Manihot esculenta HOM05D006234 ORTHO05D007813 7.9e-86 321.2 253 78.7
Ciclev10021475m.g Citrus clementina HOM05D006234 ORTHO05D007813 1.0e-85 320.9 277 65.3
Lj4g0025683 Lotus japonicus HOM05D006234 ORTHO05D007813 1.3e-85 320.5 244 71.3
HanXRQChr05g0155761 Helianthus annuus HOM05D006234 ORTHO05D007813 8.7e-85 317.8 288 68.8
unitig_60.g25412 Utricularia gibba HOM05D006234 ORTHO05D007813 8.7e-85 317.8 280 66.1
Phvul.003G201500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 1.1e-84 317.4 215 80.5
Aqoxy3G02888 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 1.5e-84 317.0 241 73.0
TPR.G37565 Trifolium pratense HOM05D006234 ORTHO05D007813 3.3e-84 315.8 209 74.2
PSO063G7211 Papaver somniferum HOM05D006234 ORTHO05D007813 4.3e-84 315.5 284 67.6
ClCG01G013210 Citrullus lanatus HOM05D006234 ORTHO05D007813 9.6e-84 314.3 294 63.3
Medtr4g105610 Medicago truncatula HOM05D006234 ORTHO05D007813 9.6e-84 314.3 234 68.4
THA.LOC104809262 Tarenaya hassleriana HOM05D006234 ORTHO05D007813 9.6e-84 314.3 246 66.7
Zm00001eb345780 Zea mays HOM05D006234 ORTHO05D007813 9.6e-84 314.3 209 74.2
TAR629G2947 Trochodendron aralioides HOM05D006234 ORTHO05D007813 1.6e-83 313.5 280 68.6
SalBow5G5218 Salvia bowleyana HOM05D006234 ORTHO05D007813 3.7e-83 312.4 280 61.8
MSTRG.9679 Avicennia marina HOM05D006234 ORTHO05D007813 4.8e-83 312.0 282 69.5
Duzib205G1984 Durio zibethinus HOM05D006234 ORTHO05D007813 1.4e-82 310.5 297 58.9
PGSC0003DMG401026661 Solanum tuberosum HOM05D006234 ORTHO05D007813 2.4e-82 309.7 250 68.4
PSO832G4587 Papaver somniferum HOM05D006234 ORTHO05D007813 4.0e-82 308.9 211 79.1
TAR622G1324 Trochodendron aralioides HOM05D006234 ORTHO05D007813 1.2e-81 307.4 249 73.1
Lalb_Chr13g0297731 Lupinus albus HOM05D006234 ORTHO05D007813 2.0e-81 306.6 212 71.7
Glyma.04G184400 Glycine max HOM05D006234 ORTHO05D007813 7.6e-81 304.7 286 64.0
Lj1g0005957 Lotus japonicus HOM05D006234 ORTHO05D007813 1.3e-80 303.9 282 63.1
HPP92_001303 Vanilla planifolia HOM05D006234 ORTHO05D007813 8.4e-80 301.2 212 70.8
AUR62008196 Chenopodium quinoa HOM05D006234 ORTHO05D007813 2.7e-78 296.2 297 58.6
FAN13G1809 Fragaria x ananassa HOM05D006234 ORTHO05D007813 2.7e-78 296.2 194 74.7
Os05g0170800 Oryza sativa ssp. japonica HOM05D006234 ORTHO05D007813 3.5e-78 295.8 213 74.6
SalBow6G2400 Salvia bowleyana HOM05D006234 ORTHO05D007813 3.5e-78 295.8 281 64.4
VMungo1309G2926 Vigna mungo HOM05D006234 ORTHO05D007813 3.5e-78 295.8 286 55.9
SGA_v2.0_scaffold114G31825 Striga asiatica HOM05D006234 ORTHO05D007813 1.3e-77 293.9 255 60.0
ECA246G1070 Erigeron canadensis HOM05D006234 ORTHO05D007813 3.9e-77 292.4 300 62.3
MBI10_g27998_MAGBIO Magnolia biondii HOM05D006234 ORTHO05D007813 8.7e-77 291.2 253 64.4
Glyma.06G181500 Glycine max HOM05D006234 ORTHO05D007813 5.6e-76 288.5 286 62.2
Phvul.009G177500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 2.6e-73 279.6 261 57.1
SalBow6G3516 Salvia bowleyana HOM05D006234 ORTHO05D007813 4.5e-73 278.9 187 73.8
VMungo1215G2331 Vigna mungo HOM05D006234 ORTHO05D007813 2.9e-72 276.2 206 69.4
Zm00001eb124590 Zea mays HOM05D006234 ORTHO05D007813 8.4e-72 274.6 212 67.5
arahy.Tifrunner.gnm1.ann1.HN9NVD Arachis hypogaea HOM05D006234 ORTHO05D007813 2.7e-70 269.6 209 64.1
Nn3g16823 Nelumbo nucifera HOM05D006234 ORTHO05D007813 1.0e-69 267.7 304 51.0
SEGI_35494 Sequoiadendron giganteum HOM05D006234 ORTHO05D007813 5.1e-69 265.4 209 64.1
Cpa.g.sc685.2 Carica papaya HOM05D006234 ORTHO05D007813 6.7e-69 265.0 138 89.1
Dinv38575 Davidia involucrata HOM05D006234 ORTHO05D007813 1.1e-68 264.2 230 72.2
CDE04G1656 Ceratophyllum demersum HOM05D006234 ORTHO05D007813 3.3e-68 262.7 284 59.5
CAN.G263.4 Capsicum annuum HOM05D006234 ORTHO05D007813 1.3e-67 260.8 191 70.2
HanXRQChr05g0132691 Helianthus annuus HOM05D006234 ORTHO05D007813 3.7e-67 259.2 256 54.7
arahy.Tifrunner.gnm1.ann1.68I129 Arachis hypogaea HOM05D006234 ORTHO05D007813 3.6e-62 242.7 209 60.8
Prupe.5G172000 Prunus persica HOM05D006234 ORTHO05D007813 2.6e-57 226.5 226 64.6
Actinidia19103 Actinidia chinensis HOM05D006234 ORTHO05D007813 3.2e-55 219.5 115 88.7
Pp3c21_1540 Physcomitrium patens HOM05D006234 ORTHO05D007813 1.7e-48 197.2 212 57.1
SalBow1G2571 Salvia bowleyana HOM05D006234 ORTHO05D007813 2.6e-41 173.3 141 63.8
Aqoxy6G01962 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 1.2e-38 164.5 134 63.4
MCO05G167 Micromonas commoda HOM05D006234 ORTHO05D007813 1.2e-30 137.9 183 41.0
Cre16.g650500 Chlamydomonas reinhardtii HOM05D006234 ORTHO05D007813 1.6e-30 137.5 204 48.5
DCAR_026145 Daucus carota HOM05D007767 ORTHO05D010057 1.3e-27 127.9 169 60.4
Lalb_Chr08g0236591 Lupinus albus HOM05D006234 ORTHO05D007813 2.7e-25 120.2 70 80.0
SalBow8G5646 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.0e-24 118.2 179 43.0
Psat5g000720 Pisum sativum HOM05D006234 ORTHO05D007813 9.5e-23 111.7 159 47.2
Solyc12g021360.3 Solanum lycopersicum HOM05D006234 ORTHO05D007813 2.1e-22 110.5 109 56.9
Actinidia19102 Actinidia chinensis HOM05D006234 ORTHO05D007813 1.8e-21 107.5 122 53.3
Ca_21933_v3 Cicer arietinum L. HOM05D000957 ORTHO05D000754 5.2e-21 105.9 94 61.7
ATR1091G013 Amborella trichopoda HOM05D006234 ORTHO05D007813 4.9e-19 99.4 121 49.6
Cre09.g387134 Chlamydomonas reinhardtii HOM05D006234 ORTHO05D007813 1.8e-18 97.4 133 39.1
SalBow1G3204 Salvia bowleyana HOM05D006234 ORTHO05D007813 2.0e-17 94.0 74 64.9
arahy.Tifrunner.gnm1.ann1.AH97YV Arachis hypogaea HOM05D006234 ORTHO05D007813 5.6e-15 85.9 55 74.5
PRCOL_00003688 Prasinoderma coloniale HOM05D001043 ORTHO05D006432 7.3e-15 85.5 105 42.9
Lalb_Chr08g0236581 Lupinus albus HOM05D006234 ORTHO05D007813 4.0e-13 79.7 84 57.1
Cpa.g.sc685.1 Carica papaya HOM05D006234 ORTHO05D007813 9.2e-10 68.6 109 44.0
CSS0043871 Camellia sinensis var. sinensis HOM05D001043 ORTHO05D006432 1.7e-08 64.3 149 32.9
RcHm_v2.0_Chr6g0279701 Rosa chinensis HOM05D006234 ORTHO05D007813 2.3e-08 63.9 54 63.0
CSS0016711 Camellia sinensis var. sinensis HOM05D001043 ORTHO05D006432 6.6e-08 62.4 162 32.7
HanXRQChr03g0092911 Helianthus annuus HOM05D001043 ORTHO05D006432 1.5e-07 61.2 137 32.1
ECA240G3866 Erigeron canadensis HOM05D001043 ORTHO05D006432 3.3e-07 60.1 139 31.7
Atru.chr4.1261 Acer truncatum HOM05D001043 ORTHO05D006432 4.3e-07 59.7 141 31.9
AUR62023842 Chenopodium quinoa HOM05D001043 ORTHO05D006432 1.6e-06 57.8 135 30.4
SalBow3G0890 Salvia bowleyana HOM05D001251 ORTHO05D007813 1.6e-06 57.8 30 86.7
Hund12412 Selenicereus undatus HOM05D001043 ORTHO05D006432 2.1e-06 57.4 137 29.2


User provided reference genes

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