Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 8.1e-182 640.2 305 100.0
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 2.6e-140 502.3 305 81.3
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 2.0e-116 422.9 305 65.9
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 4.0e-112 408.7 305 66.2
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 8.9e-112 407.5 303 64.4
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 6.4e-110 401.4 305 63.6
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 1.1e-109 400.6 304 64.1
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 1.8e-109 399.8 310 64.5
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 2.4e-109 399.4 305 64.6
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 7.0e-109 397.9 307 64.5
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 7.8e-108 394.4 306 63.1
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 1.3e-107 393.7 305 64.3
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 1.3e-107 393.7 305 64.6
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 8.6e-107 391.0 305 61.0
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 1.9e-106 389.8 305 62.0
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 1.6e-105 386.7 303 62.4
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 3.6e-105 385.6 305 61.0
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 1.4e-104 383.6 303 63.0
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 8.9e-104 380.9 307 60.6
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 2.0e-103 379.8 304 61.5
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 5.8e-103 378.3 304 61.5
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 5.8e-103 378.3 304 61.5
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 7.5e-103 377.9 304 61.2
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.2e-102 376.3 304 61.2
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 3.7e-102 375.6 298 61.7
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 6.4e-102 374.8 305 59.3
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 8.3e-102 374.4 305 60.0
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 1.4e-101 373.6 307 59.3
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 2.4e-101 372.9 307 59.0
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 5.4e-101 371.7 305 59.0
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 3.5e-100 369.0 305 58.0
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 3.5e-100 369.0 307 59.6
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 3.5e-100 369.0 307 60.6
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 7.8e-100 367.9 305 58.7
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 1.7e-99 366.7 305 58.0
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 2.5e-98 362.8 298 58.1
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 4.3e-98 362.1 307 57.3
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 4.3e-98 362.1 296 58.4
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 5.6e-98 361.7 305 57.7
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 1.2e-97 360.5 305 57.4
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 2.1e-97 359.8 296 58.1
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 2.8e-97 359.4 305 61.0
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 3.6e-97 359.0 307 58.6
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 4.7e-97 358.6 304 58.2
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 4.7e-97 358.6 307 57.0
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 6.2e-97 358.2 307 59.0
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 6.2e-97 358.2 300 60.3
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 8.1e-97 357.8 305 58.4
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 8.1e-97 357.8 307 59.0
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 1.1e-96 357.5 305 59.7
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 4.0e-96 355.5 296 57.4
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 6.8e-96 354.8 304 56.2
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 8.9e-96 354.4 296 59.5
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 1.2e-95 354.0 307 56.7
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 1.2e-95 354.0 307 56.7
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 9.8e-95 350.9 293 58.0
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 1.7e-94 350.1 294 59.2
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 6.4e-94 348.2 296 57.1
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 1.9e-93 346.7 306 57.2
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 4.6e-92 342.0 298 56.7
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 5.1e-91 338.6 306 54.9
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 3.6e-89 332.4 305 56.4
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 8.1e-89 331.3 260 62.7
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 2.3e-88 329.7 263 61.2
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 1.2e-87 327.4 297 56.9
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 5.8e-87 325.1 307 51.8
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 1.7e-83 313.5 305 51.8
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 1.1e-80 304.3 268 56.3
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 4.0e-80 302.4 305 52.8
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 1.3e-78 297.4 305 50.5
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 2.5e-74 283.1 263 52.5
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 3.8e-70 269.2 267 50.6
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 8.4e-70 268.1 221 61.5
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 2.3e-67 260.0 270 48.5
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 3.9e-59 232.6 215 56.3
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 3.9e-59 232.6 215 56.3
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 2.1e-57 226.9 222 51.4
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 1.8e-56 223.8 208 55.3
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 4.0e-56 222.6 128 76.6
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 7.9e-52 208.4 133 72.2
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 2.0e-47 193.7 323 39.0
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 1.1e-45 188.0 222 42.8
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 7.2e-45 185.3 132 68.2
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 1.4e-40 171.0 224 42.4
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 1.0e-38 164.9 203 42.9
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 4.2e-37 159.5 100 70.0
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 9.4e-37 158.3 103 71.8
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 1.0e-35 154.8 107 71.0
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 3.3e-34 149.8 201 40.8
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 3.7e-33 146.4 317 33.1
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.1e-32 144.8 317 33.1
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 2.0e-26 124.0 99 62.6
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 2.0e-18 97.4 93 54.8
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 3.5e-15 86.7 53 67.9
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.7e-14 84.3 53 66.0
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 2.2e-14 84.0 96 43.8
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 2.5e-13 80.5 95 45.3


User provided reference genes

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