Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 1.0e-41 172.9 87 100.0
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 3.4e-40 167.9 87 96.6
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 3.4e-40 167.9 87 96.6
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 3.7e-39 164.5 87 93.1
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 1.6e-34 149.1 84 86.9
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 3.6e-34 147.9 81 88.9
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 6.2e-34 147.1 81 88.9
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 1.1e-33 146.4 81 87.7
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 1.1e-33 146.4 81 87.7
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 1.1e-33 146.4 81 87.7
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 1.4e-33 146.0 81 88.9
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 2.3e-33 145.2 81 86.4
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 1.2e-32 142.9 81 86.4
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 1.2e-32 142.9 81 86.4
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 1.2e-32 142.9 81 86.4
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 1.2e-32 142.9 81 86.4
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 1.2e-32 142.9 81 86.4
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 3.4e-32 141.4 81 85.2
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 3.4e-32 141.4 80 85.0
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 3.4e-32 141.4 80 85.0
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 3.4e-32 141.4 87 79.3
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 4.4e-32 141.0 80 85.0
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 7.5e-32 140.2 81 82.7
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 9.8e-32 139.8 84 81.0
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 9.8e-32 139.8 84 81.0
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 9.8e-32 139.8 84 81.0
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 9.8e-32 139.8 84 81.0
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 1.3e-31 139.4 83 80.7
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 1.7e-31 139.0 80 83.8
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 2.2e-31 138.7 84 79.8
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 2.2e-31 138.7 84 79.8
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 2.9e-31 138.3 80 81.2
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 2.9e-31 138.3 87 78.2
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 3.7e-31 137.9 80 82.5
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 3.7e-31 137.9 81 81.5
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 4.9e-31 137.5 80 83.8
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 6.4e-31 137.1 80 82.5
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 8.3e-31 136.7 80 83.8
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 1.4e-30 136.0 80 81.2
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 1.9e-30 135.6 80 81.2
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 4.1e-30 134.4 83 77.1
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 5.4e-30 134.0 79 82.3
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 7.0e-30 133.7 80 78.8
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 7.0e-30 133.7 81 80.2
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.2e-29 132.9 92 73.9
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 1.2e-29 132.9 80 78.8
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 1.6e-29 132.5 80 80.0
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 2.1e-29 132.1 87 74.7
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 2.1e-29 132.1 78 82.1
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 2.1e-29 132.1 76 82.9
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 2.7e-29 131.7 80 77.5
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 2.7e-29 131.7 81 77.8
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 1.0e-28 129.8 82 74.4
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 1.3e-28 129.4 84 76.2
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 1.3e-28 129.4 82 79.3
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 1.3e-28 129.4 79 81.0
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 2.3e-28 128.6 79 78.5
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 2.3e-28 128.6 84 75.0
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 3.0e-28 128.3 79 79.7
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 3.0e-28 128.3 82 80.5
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 3.9e-28 127.9 82 73.2
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 3.9e-28 127.9 81 74.1
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 6.6e-28 127.1 80 77.5
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 6.6e-28 127.1 80 77.5
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 8.6e-28 126.7 72 84.7
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 8.6e-28 126.7 79 77.2
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 8.6e-28 126.7 79 78.5
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 1.1e-27 126.3 82 78.0
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 1.1e-27 126.3 82 76.8
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.9e-27 125.6 76 77.6
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 2.5e-27 125.2 70 85.7
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 4.3e-27 124.4 76 77.6
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 5.6e-27 124.0 76 78.9
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 7.3e-27 123.6 82 76.8
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 1.6e-26 122.5 76 80.3
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 2.1e-26 122.1 76 76.3
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 2.8e-26 121.7 79 74.7
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 4.7e-26 120.9 83 75.9
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 6.2e-26 120.6 78 75.6
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 8.9e-25 116.7 77 70.1
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 1.2e-24 116.3 77 70.1
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.5e-24 115.9 76 76.3
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 2.0e-24 115.5 68 80.9
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 2.6e-24 115.2 77 70.1
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 7.5e-24 113.6 73 76.7
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 7.5e-24 113.6 77 68.8
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 7.5e-24 113.6 76 73.7
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 7.5e-24 113.6 76 73.7
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 1.7e-23 112.5 68 83.8
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 1.7e-23 112.5 77 68.8
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 2.2e-23 112.1 73 76.7
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 6.4e-23 110.5 68 80.9
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 8.3e-23 110.2 79 68.4
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 8.3e-23 110.2 80 67.5
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 1.9e-22 109.0 99 58.6
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 2.4e-22 108.6 67 79.1
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 3.2e-22 108.2 152 42.1
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 9.2e-22 106.7 102 58.8
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 2.7e-21 105.1 70 75.7
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 1.0e-20 103.2 68 75.0
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 5.1e-20 100.9 63 77.8
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 5.1e-20 100.9 56 85.7
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 1.1e-19 99.8 55 85.5
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 1.9e-19 99.0 75 62.7
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 3.3e-19 98.2 67 73.1
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 4.3e-19 97.8 64 73.4
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 9.5e-19 96.7 122 45.1
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.6e-18 95.9 154 40.9
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 1.4e-17 92.8 78 59.0
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 4.0e-17 91.3 78 61.5
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 4.4e-16 87.8 65 67.7
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 3.8e-15 84.7 52 80.8
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 1.4e-14 82.8 52 76.9
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 1.4e-14 82.8 76 59.2
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 4.2e-14 81.3 77 58.4
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 5.4e-14 80.9 72 56.9
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 6.0e-13 77.4 55 70.9
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.0e-12 76.6 73 58.9
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 1.3e-12 76.3 62 64.5
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 2.3e-12 75.5 73 53.4
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 9.0e-09 63.5 57 54.4
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 4.4e-08 61.2 39 79.5
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.3e-07 59.7 35 82.9
SHI34267 Sapria himalayana HOM05D006711 ORTHO05D008104 9.3e-06 53.5 34 79.4


User provided reference genes

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