Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra12G0053900 Salix brachista HOM05D003533 ORTHO05D004009 1.2e-23 112.8 83 100.0
Potri.012G075800 Populus trichocarpa HOM05D003533 ORTHO05D004009 3.7e-20 101.3 83 88.0
Sabra15G0095000 Salix brachista HOM05D003533 ORTHO05D004009 2.1e-15 85.5 83 74.7
Sabra15G0095900 Salix brachista HOM05D003533 ORTHO05D004009 2.1e-15 85.5 83 74.7
Potri.015G070700 Populus trichocarpa HOM05D003533 ORTHO05D004009 3.6e-15 84.7 83 75.9
Manes.14G070400 Manihot esculenta HOM05D003533 ORTHO05D004009 1.1e-11 73.2 84 47.6
Manes.06G100300 Manihot esculenta HOM05D003533 ORTHO05D004009 1.4e-11 72.8 85 48.2
Cfa019066 Carpinus fangiana HOM05D003533 ORTHO05D004009 4.1e-11 71.2 83 67.5
Lsat_1_v5_gn_1_12101 Lactuca sativa HOM05D003533 ORTHO05D004009 2.0e-10 68.9 88 44.3
CiPaw.12G022900 Carya illinoinensis HOM05D003533 ORTHO05D004009 5.9e-10 67.4 85 50.6
ECA247G1125 Erigeron canadensis HOM05D003533 ORTHO05D004009 1.3e-09 66.2 83 42.2
TWI81G0654 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 1.3e-09 66.2 74 45.9
Duzib084G0973 Durio zibethinus HOM05D003533 ORTHO05D004009 2.2e-09 65.5 83 49.4
QL10p012332 Quercus lobata HOM05D003533 ORTHO05D004009 2.2e-09 65.5 82 43.9
Thecc.03G004000 Theobroma cacao HOM05D003533 ORTHO05D004009 2.9e-09 65.1 80 45.0
Thecc.03G004200 Theobroma cacao HOM05D003533 ORTHO05D004009 3.8e-09 64.7 80 45.0
PGR083G0433 Punica granatum HOM05D003533 ORTHO05D004009 5.0e-09 64.3 88 55.7
TWI15G0955 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 8.5e-09 63.5 83 44.6
Lj4g0015145 Lotus japonicus HOM05D003533 ORTHO05D004009 1.5e-08 62.8 85 45.9
Eucgr.C02738 Eucalyptus grandis HOM05D003533 ORTHO05D004009 2.5e-08 62.0 86 62.8
TAR622G1413 Trochodendron aralioides HOM05D003533 ORTHO05D004009 5.5e-08 60.8 84 44.0
CiPaw.06G076100 Carya illinoinensis HOM05D003533 ORTHO05D004009 9.4e-08 60.1 84 44.0
MELO3C017124.2 Cucumis melo HOM05D003533 ORTHO05D004009 1.2e-07 59.7 84 44.0
Eucgr.B00337 Eucalyptus grandis HOM05D003533 ORTHO05D004009 2.1e-07 58.9 83 41.0
Glyma.05G033600 Glycine max HOM05D003533 ORTHO05D004009 2.7e-07 58.5 74 43.2
TAR629G1875 Trochodendron aralioides HOM05D003533 ORTHO05D004009 2.7e-07 58.5 84 42.9
CSS0013527 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 4.7e-07 57.8 85 41.2
CSS0016862 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 4.7e-07 57.8 85 41.2
CANSAT54G2961 Cannabis sativa HOM05D003533 ORTHO05D004009 6.1e-07 57.4 79 44.3
Medtr4g106500 Medicago truncatula HOM05D003533 ORTHO05D004009 6.1e-07 57.4 78 42.3
Oeu017591.1 Olea europaea HOM05D003533 ORTHO05D004009 6.1e-07 57.4 83 42.2
ClCG06G016690 Citrullus lanatus HOM05D003533 ORTHO05D004009 8.0e-07 57.0 51 58.8
CiPaw.06G076000 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.0e-06 56.6 84 42.9
CiPaw.06G076200 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.0e-06 56.6 84 42.9
FAN22G0766 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.0e-06 56.6 85 44.7
MD14G1187200 Malus domestica HOM05D003533 ORTHO05D004009 1.8e-06 55.8 81 39.5
Glyma.17G093500 Glycine max HOM05D003533 ORTHO05D004009 2.3e-06 55.5 77 44.2
Ciclev10023101m.g Citrus clementina HOM05D003533 ORTHO05D004009 3.0e-06 55.1 83 60.2
Phvul.003G196800 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 4.0e-06 54.7 80 38.8
COL.COLO4_37881 Corchorus olitorius HOM05D003533 ORTHO05D004009 5.2e-06 54.3 82 35.4
FAN17G1844 Fragaria x ananassa HOM05D003533 ORTHO05D004009 8.8e-06 53.5 85 42.4


User provided reference genes

Program Settings