Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra12G0051800 Salix brachista HOM05D006327 ORTHO05D007952 1.1e-218 763.1 395 100.0
Potri.012G072600 Populus trichocarpa HOM05D006327 ORTHO05D007952 7.0e-117 424.9 288 82.3
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 2.1e-68 263.8 306 57.2
Manes.14G072700 Manihot esculenta HOM05D006327 ORTHO05D007952 3.3e-66 256.5 309 55.3
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 1.1e-64 251.5 313 55.0
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 5.2e-64 249.2 303 54.1
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 4.4e-63 246.1 303 54.5
Gohir.D13G092100 Gossypium hirsutum HOM05D006327 ORTHO05D007952 5.8e-63 245.7 303 54.8
CSS0041426 Camellia sinensis var. sinensis HOM05D006327 ORTHO05D007952 7.5e-63 245.4 304 52.3
QL10p014464 Quercus lobata HOM05D006327 ORTHO05D007952 2.9e-62 243.4 309 54.4
Gohir.A13G087700 Gossypium hirsutum HOM05D006327 ORTHO05D007952 4.9e-62 242.7 303 54.1
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 1.1e-61 241.5 309 52.1
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 2.4e-61 240.4 296 53.7
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 3.2e-61 240.0 295 53.9
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 5.4e-61 239.2 294 52.7
Thecc.K0000500 Theobroma cacao HOM05D006327 ORTHO05D007952 4.6e-60 236.1 294 53.4
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 7.8e-60 235.3 312 50.6
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 2.3e-59 233.8 294 51.7
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 3.0e-59 233.4 312 51.0
Hma1.2p1_0572F.1_g181140 Hydrangea macrophylla HOM05D006327 ORTHO05D007952 5.1e-59 232.6 304 51.6
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.1e-58 231.5 296 51.7
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 3.3e-58 229.9 306 51.3
Ciclev10020740m.g Citrus clementina HOM05D006327 ORTHO05D007952 5.6e-58 229.2 313 50.5
CiPaw.12G020800 Carya illinoinensis HOM05D006327 ORTHO05D007952 2.8e-57 226.9 303 51.8
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 3.1e-56 223.4 305 49.8
PGR083G2875 Punica granatum HOM05D006327 ORTHO05D007952 2.9e-54 216.9 337 48.4
Actinidia34971 Actinidia chinensis HOM05D006327 ORTHO05D007952 3.8e-54 216.5 307 47.9
Rhsim12G0160300 Rhododendron simsii HOM05D006327 ORTHO05D007952 2.4e-53 213.8 299 48.2
vmacro16576 Vaccinium macrocarpon HOM05D006327 ORTHO05D007952 1.7e-51 207.6 288 46.5
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 3.9e-51 206.5 314 48.1
TAR629G2492 Trochodendron aralioides HOM05D006327 ORTHO05D007952 3.9e-51 206.5 318 47.5
ClCG06G016530 Citrullus lanatus HOM05D006327 ORTHO05D007952 1.9e-50 204.1 313 46.0
arahy.Tifrunner.gnm1.ann1.RDR8CP Arachis hypogaea HOM05D006327 ORTHO05D007952 4.3e-50 203.0 313 47.3
Lj9A456G27 Lonicera japonica HOM05D006327 ORTHO05D007952 9.6e-50 201.8 305 46.6
CsaV3_1G001980 Cucumis sativus L. HOM05D006327 ORTHO05D007952 2.8e-49 200.3 309 47.6
Hund09383 Selenicereus undatus HOM05D006327 ORTHO05D007952 8.1e-49 198.7 308 46.8
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 5.3e-48 196.1 282 49.3
Nn4g22987 Nelumbo nucifera HOM05D006327 ORTHO05D007952 5.3e-48 196.1 328 46.3
Sed0003639 Sechium edule HOM05D006327 ORTHO05D007952 6.9e-48 195.7 286 47.2
AUR62008321 Chenopodium quinoa HOM05D006327 ORTHO05D007952 2.6e-47 193.7 291 46.7
VMungo1309G2881 Vigna mungo HOM05D006327 ORTHO05D007952 4.4e-47 193.0 296 45.9
arahy.Tifrunner.gnm1.ann1.Y9A7HY Arachis hypogaea HOM05D006327 ORTHO05D007952 7.6e-47 192.2 313 45.7
Phvul.009G183700 Phaseolus vulgaris HOM05D006327 ORTHO05D007952 9.9e-47 191.8 297 45.5
Lalb_Chr11g0071521 Lupinus albus HOM05D006327 ORTHO05D007952 1.7e-46 191.0 310 45.8
Nitab4.5_0000003g0110 Nicotiana tabacum HOM05D006327 ORTHO05D007952 4.9e-46 189.5 292 47.3
AUR62021775 Chenopodium quinoa HOM05D006327 ORTHO05D007952 1.4e-45 188.0 296 47.3
Nitab4.5_0000758g0030 Nicotiana tabacum HOM05D006327 ORTHO05D007952 2.4e-45 187.2 305 46.9
Eucgr.B00389 Eucalyptus grandis HOM05D006327 ORTHO05D007952 2.7e-44 183.7 299 46.5
EL10Ac5g10880 Beta vulgaris HOM05D006327 ORTHO05D007952 4.6e-44 183.0 296 46.3
TPR.G11929 Trifolium pratense HOM05D006327 ORTHO05D007952 3.0e-43 180.3 289 42.9
TWI81G1080 Tripterygium wilfordii HOM05D006327 ORTHO05D007952 5.1e-43 179.5 283 48.8
Glyma.04G176800 Glycine max HOM05D006327 ORTHO05D007952 2.5e-42 177.2 309 44.0
Lj1g0017631 Lotus japonicus HOM05D006327 ORTHO05D007952 2.5e-42 177.2 301 45.8
Medtr0168s0110 Medicago truncatula HOM05D006327 ORTHO05D007952 2.5e-42 177.2 293 45.4
Glyma.06G188300 Glycine max HOM05D006327 ORTHO05D007952 7.3e-42 175.6 298 46.0
MELO3C017142.2 Cucumis melo HOM05D006327 ORTHO05D007952 1.3e-41 174.9 363 40.5
Peaxi162Scf00689g00562 Petunia axillaris HOM05D006327 ORTHO05D007952 2.1e-41 174.1 298 44.0
DCAR_016525 Daucus carota HOM05D006327 ORTHO05D007952 3.6e-41 173.3 284 46.5
Solyc06g071170.4 Solanum lycopersicum HOM05D006327 ORTHO05D007952 2.4e-40 170.6 282 43.6
Sopen06g027480 Solanum pennellii HOM05D006327 ORTHO05D007952 4.0e-40 169.9 282 44.7
Migut.I00102 Erythranthe guttata HOM05D006327 ORTHO05D007952 5.3e-40 169.5 298 45.0
THA.LOC104818247 Tarenaya hassleriana HOM05D006327 ORTHO05D007952 9.0e-40 168.7 297 43.8
PGSC0003DMG400033064 Solanum tuberosum HOM05D006327 ORTHO05D007952 5.8e-39 166.0 285 44.2
Sed0027580 Sechium edule HOM05D006327 ORTHO05D007952 1.7e-38 164.5 294 44.2
Thhalv10010485m.g Eutrema salsugineum HOM05D006327 ORTHO05D007952 2.2e-38 164.1 301 43.2
Psat5g181760 Pisum sativum HOM05D006327 ORTHO05D007952 3.8e-38 163.3 295 43.4
SGA_v2.0_scaffold56G20076 Striga asiatica HOM05D006327 ORTHO05D007952 3.8e-38 163.3 290 39.7
ECA247G1897 Erigeron canadensis HOM05D006327 ORTHO05D007881 1.1e-37 161.8 304 41.1
CANSAT80G2449 Cannabis sativa HOM05D006327 ORTHO05D007952 2.4e-37 160.6 395 35.2
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 5.4e-37 159.5 311 41.5
HanXRQChr02g0045371 Helianthus annuus HOM05D006327 ORTHO05D007952 2.1e-36 157.5 283 41.0
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 7.9e-36 155.6 306 41.5
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 2.3e-35 154.1 318 41.2
Carub.0005s1399 Capsella rubella HOM05D006327 ORTHO05D007952 1.5e-34 151.4 297 42.1
Ah.02g112960 Amaranthus hybridus HOM05D006327 ORTHO05D007952 3.3e-34 150.2 288 41.3
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 7.4e-34 149.1 297 42.1
Cc04_g16010 Coffea canephora HOM05D006327 ORTHO05D007952 4.8e-33 146.4 324 38.0
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 6.2e-33 146.0 300 40.3
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 6.9e-32 142.5 302 40.1
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 6.9e-32 142.5 302 40.1
Atru.chr9.2360 Acer truncatum HOM05D006327 ORTHO05D007952 9.0e-32 142.1 177 54.8
Aqoxy3G03193 Aquilegia oxysepala HOM05D006327 ORTHO05D007952 3.4e-31 140.2 342 35.7
unitig_61.g26481 Utricularia gibba HOM05D006327 ORTHO05D007952 2.9e-30 137.1 246 40.7
PSO832G2780 Papaver somniferum HOM05D006327 ORTHO05D007952 4.9e-30 136.3 350 37.4
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 9.3e-29 132.1 302 38.1
PSO591G0157 Papaver somniferum HOM05D006327 ORTHO05D007952 1.6e-28 131.3 353 37.1
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 1.3e-27 128.3 300 38.7
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 1.3e-27 128.3 300 38.7
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 5.1e-27 126.3 295 39.0
CDE06G0071 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 1.9e-26 124.4 298 36.2
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 2.8e-25 120.6 313 37.7
Hund02693 Selenicereus undatus HOM05D006327 ORTHO05D007952 1.8e-24 117.9 291 37.1
Actinidia19065 Actinidia chinensis HOM05D006327 ORTHO05D007952 1.5e-23 114.8 305 35.7
Sc12g0005950 Simmondsia chinensis HOM05D006327 ORTHO05D007952 4.6e-20 103.2 316 33.9
SEGI_36963 Sequoiadendron giganteum HOM05D006327 ORTHO05D007952 9.7e-18 95.5 313 31.9
ATR0665G137 Amborella trichopoda HOM05D006327 ORTHO05D007952 6.3e-17 92.8 146 41.1
HPP92_015937 Vanilla planifolia HOM05D006327 ORTHO05D007952 4.1e-16 90.1 277 33.2
HPP92_015918 Vanilla planifolia HOM05D006327 ORTHO05D007952 9.0e-16 89.0 277 32.1
Nn5g29700 Nelumbo nucifera HOM05D006327 ORTHO05D007952 7.7e-15 85.9 61 70.5
Nn4g25043 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.7e-14 84.7 65 67.7
Nn5g29803 Nelumbo nucifera HOM05D006327 ORTHO05D007952 2.2e-14 84.3 65 67.7
Os05g0220900 Oryza sativa ssp. japonica HOM05D006327 ORTHO05D007952 2.9e-14 84.0 299 32.8
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.8e-14 83.6 65 66.2
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 3.2e-13 80.5 161 41.0
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.2e-13 80.5 65 64.6
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.2e-13 80.5 65 64.6
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.2e-13 80.5 65 64.6
Nn1g09464 Nelumbo nucifera HOM05D006327 ORTHO05D007952 4.2e-13 80.1 52 73.1
Sc12g0005960 Simmondsia chinensis HOM05D006327 ORTHO05D007952 1.6e-12 78.2 48 75.0
SGA_v2.0_scaffold25G10883 Striga asiatica HOM05D006327 ORTHO05D007952 2.7e-12 77.4 292 30.5
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 4.6e-12 76.6 317 31.2
Nn1g07420 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.1e-12 76.3 88 52.3
Zm00001eb053670 Zea mays HOM05D006327 ORTHO05D007952 2.3e-11 74.3 281 31.0
Oeu035426.1 Olea europaea HOM05D006327 ORTHO05D007952 1.5e-10 71.6 64 59.4
Cpa.g.c28309.3 Carica papaya HOM05D006327 ORTHO05D007952 2.0e-10 71.2 176 35.8
BcaB05g23082 Brassica carinata HOM05D006327 ORTHO05D007952 2.5e-10 70.9 268 32.5
MSTRG.11411 Avicennia marina HOM05D006327 ORTHO05D007952 3.3e-10 70.5 87 42.5
ATR0665G641 Amborella trichopoda HOM05D006327 ORTHO05D007952 1.1e-08 65.5 58 56.9
SMO361G0693 Selaginella moellendorffii HOM05D006327 ORTHO05D007952 1.4e-08 65.1 200 29.0
CDE08G0244 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 1.5e-07 61.6 227 31.3


User provided reference genes

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