Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 1.8e-125 452.6 230 100.0
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 1.1e-61 240.7 217 68.2
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 2.2e-54 216.5 216 62.0
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 2.3e-43 179.9 198 53.0
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 6.6e-43 178.3 201 53.2
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 1.5e-42 177.2 220 49.1
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 2.5e-42 176.4 206 53.4
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 5.6e-42 175.3 206 50.5
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 1.6e-41 173.7 225 49.8
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 3.6e-41 172.6 230 47.4
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 6.2e-41 171.8 193 52.3
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 1.1e-40 171.0 217 49.3
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 1.4e-40 170.6 219 49.8
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 1.8e-40 170.2 151 61.6
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 6.8e-40 168.3 151 60.9
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 8.9e-40 167.9 152 59.9
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 8.9e-40 167.9 220 48.2
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 2.0e-39 166.8 215 48.4
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 3.4e-39 166.0 211 49.3
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 3.4e-39 166.0 163 59.5
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 7.5e-39 164.9 151 60.9
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 9.9e-39 164.5 211 49.3
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 2.2e-38 163.3 170 54.7
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 2.2e-38 163.3 203 49.3
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 2.2e-38 163.3 203 50.7
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 3.7e-38 162.5 214 48.6
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 4.9e-38 162.2 147 58.5
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 1.9e-37 160.2 152 59.2
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 3.2e-37 159.5 150 58.7
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 3.2e-37 159.5 188 50.0
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 5.4e-37 158.7 152 59.2
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 5.4e-37 158.7 150 58.7
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 5.4e-37 158.7 150 58.7
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 5.4e-37 158.7 212 46.2
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 7.1e-37 158.3 214 46.3
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 9.2e-37 157.9 197 51.3
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 1.2e-36 157.5 153 58.8
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 1.2e-36 157.5 153 58.8
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 2.1e-36 156.8 224 46.9
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 2.1e-36 156.8 152 58.6
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 2.1e-36 156.8 147 56.5
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 3.5e-36 156.0 236 44.5
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 4.6e-36 155.6 196 50.0
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 6.0e-36 155.2 203 47.8
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 7.8e-36 154.8 147 56.5
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 1.0e-35 154.5 152 57.9
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 1.3e-35 154.1 153 58.2
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 1.3e-35 154.1 153 58.2
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 1.3e-35 154.1 153 58.2
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.3e-35 154.1 196 48.0
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 3.0e-35 152.9 188 48.4
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 3.9e-35 152.5 150 56.0
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 3.9e-35 152.5 228 44.7
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 5.1e-35 152.1 192 48.4
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 1.1e-34 151.0 198 47.5
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 2.5e-34 149.8 160 54.4
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 4.3e-34 149.1 145 57.9
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 4.3e-34 149.1 148 57.4
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 9.5e-34 147.9 193 48.7
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 1.2e-33 147.5 195 49.2
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 1.2e-33 147.5 159 54.1
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 2.1e-33 146.7 154 56.5
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 2.8e-33 146.4 214 45.8
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 3.6e-33 146.0 170 52.4
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 3.6e-33 146.0 212 45.8
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 8.1e-33 144.8 170 51.8
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 8.1e-33 144.8 161 54.0
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 1.1e-32 144.4 145 56.6
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 1.1e-32 144.4 147 57.1
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 1.4e-32 144.1 146 55.5
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 1.4e-32 144.1 150 54.0
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 1.8e-32 143.7 145 54.5
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 1.8e-32 143.7 193 47.7
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 2.4e-32 143.3 161 53.4
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 2.4e-32 143.3 150 53.3
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 3.1e-32 142.9 204 46.1
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 4.0e-32 142.5 161 54.7
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 4.0e-32 142.5 161 54.7
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 5.2e-32 142.1 205 44.9
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 6.8e-32 141.7 212 45.8
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 6.8e-32 141.7 137 58.4
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 8.9e-32 141.4 150 52.7
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 8.9e-32 141.4 205 47.3
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 1.2e-31 141.0 145 53.1
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 1.5e-31 140.6 208 44.2
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 1.5e-31 140.6 144 51.4
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 2.6e-31 139.8 154 53.9
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 3.4e-31 139.4 150 55.3
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 3.4e-31 139.4 138 56.5
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 5.8e-31 138.7 161 52.8
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 5.8e-31 138.7 165 52.7
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 9.9e-31 137.9 146 54.1
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 1.3e-30 137.5 152 51.3
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 2.9e-30 136.3 156 52.6
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 4.9e-30 135.6 143 55.2
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 6.4e-30 135.2 203 44.3
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 6.4e-30 135.2 203 44.3
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 1.4e-29 134.0 147 53.1
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 2.4e-29 133.3 111 63.1
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 2.4e-29 133.3 188 45.2
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 2.4e-29 133.3 153 48.4
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 3.2e-29 132.9 196 42.3
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 5.4e-29 132.1 198 44.4
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 7.1e-29 131.7 249 37.8
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 9.2e-29 131.3 219 43.8
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 3.0e-27 126.3 185 43.2
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 6.6e-27 125.2 126 54.8
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 2.5e-26 123.2 188 44.7
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 3.3e-26 122.9 112 58.9
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 4.3e-26 122.5 111 56.8
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 1.3e-25 120.9 128 51.6
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 1.3e-25 120.9 145 49.7
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 2.1e-25 120.2 178 44.9
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 3.6e-25 119.4 190 43.2
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 6.2e-25 118.6 169 46.7
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 8.1e-25 118.2 142 52.1
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 4.0e-24 115.9 187 44.9
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 1.2e-23 114.4 186 39.2
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 5.8e-23 112.1 126 50.8
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 7.1e-21 105.1 110 52.7
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 1.3e-19 100.9 200 38.5
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 6.6e-19 98.6 109 49.5
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 3.3e-18 96.3 148 41.9
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 3.6e-17 92.8 143 42.0
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 1.1e-16 91.3 55 81.8
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 9.0e-16 88.2 160 40.0
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 1.2e-15 87.8 55 74.5
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 5.6e-10 68.9 91 46.2
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 4.0e-08 62.8 182 29.1


User provided reference genes

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