Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 0.0e+00 1344.7 670 100.0
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 0.0e+00 1255.0 668 93.7
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 0.0e+00 1181.0 667 89.2
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 1.8e-311 1072.0 667 79.9
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 7.7e-310 1066.6 678 79.2
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 1.5e-305 1052.4 670 79.0
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 9.8e-305 1049.7 679 78.2
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 1.7e-304 1048.9 679 78.4
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 7.0e-303 1043.5 679 77.6
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 1.0e-301 1039.6 661 77.6
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 6.1e-299 1030.4 693 75.8
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 2.6e-297 1025.0 672 75.7
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 8.3e-296 1020.0 676 74.6
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 4.1e-295 1017.7 666 75.1
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 1.0e-293 1013.1 617 80.6
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.2e-291 1006.1 668 75.3
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 1.4e-290 1002.7 672 74.9
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 6.8e-290 1000.3 672 74.7
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 6.8e-290 1000.3 654 75.8
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.5e-289 999.2 678 73.9
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 2.0e-289 998.8 673 75.2
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 2.2e-288 995.3 674 74.9
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 2.9e-288 995.0 648 76.1
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 1.4e-287 992.6 673 74.6
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 4.1e-287 991.1 686 73.0
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 7.0e-287 990.3 681 73.3
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 9.2e-287 989.9 656 74.7
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 2.7e-286 988.4 684 74.0
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 2.7e-286 988.4 673 74.9
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 7.8e-286 986.9 666 75.4
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 2.8e-283 978.4 651 75.1
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 1.4e-282 976.1 658 73.9
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 3.1e-282 974.9 658 74.0
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 6.8e-282 973.8 673 73.1
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 8.9e-282 973.4 677 73.3
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 3.2e-279 964.9 668 71.6
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 3.2e-279 964.9 679 72.6
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 7.0e-279 963.8 656 73.2
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 2.7e-278 961.8 675 71.7
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 2.7e-278 961.8 601 80.0
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 4.6e-278 961.1 668 72.6
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 1.3e-277 959.5 677 72.2
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 1.7e-277 959.1 602 79.6
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 5.1e-277 957.6 678 71.5
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 1.1e-276 956.4 676 71.9
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 1.9e-276 955.7 651 73.4
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 2.5e-276 955.3 601 79.7
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 1.6e-275 952.6 677 71.3
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 2.1e-275 952.2 658 71.3
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 2.8e-275 951.8 649 73.2
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 2.8e-275 951.8 650 73.2
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 3.6e-275 951.4 605 77.9
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 4.7e-275 951.0 651 71.9
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 3.1e-274 948.3 651 72.8
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 4.0e-274 948.0 649 72.4
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 5.2e-274 947.6 658 72.3
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 5.2e-274 947.6 676 71.6
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 6.8e-274 947.2 650 72.9
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 8.9e-274 946.8 651 71.9
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 9.9e-273 943.3 650 71.1
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 3.7e-272 941.4 651 76.0
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 6.4e-272 940.6 651 72.4
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 4.1e-271 937.9 650 72.2
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 7.1e-271 937.2 668 71.7
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 2.1e-270 935.6 650 72.2
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 6.0e-270 934.1 650 72.6
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 1.3e-269 932.9 649 71.2
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 2.3e-269 932.2 667 70.0
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 2.3e-269 932.2 658 71.7
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 5.6e-268 927.5 652 71.0
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 1.2e-267 926.4 652 72.7
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 2.8e-267 925.2 655 72.4
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 1.1e-266 923.3 648 71.6
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 1.5e-265 919.5 654 70.2
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 4.9e-264 914.4 654 69.0
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 8.4e-264 913.7 654 69.3
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 1.1e-263 913.3 650 71.2
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 1.9e-263 912.5 662 69.2
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 7.8e-262 907.1 653 68.3
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 1.7e-261 906.0 602 75.2
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 3.9e-261 904.8 654 68.5
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 9.6e-260 900.2 621 72.9
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 2.1e-259 899.0 655 68.4
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 2.1e-259 899.0 602 72.8
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 3.6e-259 898.3 605 74.5
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 1.8e-258 896.0 605 72.9
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 2.4e-258 895.6 602 73.1
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 2.9e-256 888.6 657 69.1
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 6.4e-256 887.5 602 74.3
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 4.2e-255 884.8 661 68.5
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 7.1e-255 884.0 651 69.1
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 1.2e-254 883.2 650 69.7
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 1.0e-253 880.2 543 79.7
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 3.1e-250 868.6 727 61.8
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 1.3e-237 826.6 638 64.6
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 1.3e-229 800.0 517 76.0
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 2.8e-227 792.3 654 62.7
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 5.3e-226 788.1 794 53.8
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 2.7e-222 775.8 665 60.8
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 3.9e-221 771.9 774 51.8
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 5.1e-221 771.5 747 52.6
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 1.4e-215 753.4 828 50.0
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 9.4e-215 750.7 472 79.9
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 3.9e-213 745.3 657 60.3
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 9.1e-210 734.2 845 47.0
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 8.5e-200 701.0 454 76.0
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 8.8e-197 691.0 596 60.1
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 8.5e-192 674.5 636 53.6
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.2e-177 627.5 423 74.2
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 8.1e-166 588.2 541 57.7
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 9.2e-162 574.7 547 54.7
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.8e-157 560.5 437 66.6
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 5.3e-125 452.6 310 72.3
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 1.4e-117 427.9 396 58.1
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 1.3e-115 421.4 261 80.5
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 1.8e-104 384.4 340 59.4
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 1.2e-97 361.7 254 70.9
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 2.2e-94 350.9 215 77.2
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 1.3e-86 325.1 334 51.2
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 7.2e-82 309.3 547 38.4
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 2.9e-62 244.2 153 73.9
Nn3g18207 Nelumbo nucifera HOM05D005975 ORTHO05D007373 9.5e-42 176.0 139 61.9
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 1.6e-41 175.3 134 63.4
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 3.6e-41 174.1 436 30.3
Cfa019814 Carpinus fangiana HOM05D005975 ORTHO05D007373 6.4e-14 83.6 68 61.8
Dinv38585 Davidia involucrata HOM05D005975 ORTHO05D007373 2.4e-13 81.6 100 52.0
Nn4g23789 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.6e-09 68.9 49 65.3
Nn1g03516 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.1e-08 66.2 49 69.4
Potri.001G289250 Populus trichocarpa HOM05D005975 ORTHO05D007373 2.0e-07 62.0 48 62.5
Lj9A429T53 Lonicera japonica HOM05D005975 ORTHO05D007373 2.6e-07 61.6 47 61.7


User provided reference genes

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