Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra12G0037800 Salix brachista HOM05D008114 ORTHO05D010089 1.0e-29 132.9 65 100.0
Potri.012G054000 Populus trichocarpa HOM05D008114 ORTHO05D010089 1.4e-23 112.5 66 86.4
Thecc.03G040900 Theobroma cacao HOM05D008114 ORTHO05D010089 3.0e-13 78.2 66 62.1
TAR374G0456 Trochodendron aralioides HOM05D008114 ORTHO05D010089 4.3e-12 74.3 66 60.6
Manes.05G132900 Manihot esculenta HOM05D008114 ORTHO05D010089 5.6e-12 73.9 67 61.2
Gohir.D09G050800 Gossypium hirsutum HOM05D008114 ORTHO05D010089 1.3e-11 72.8 65 55.4
Gorai.006G058900 Gossypium raimondii HOM05D008114 ORTHO05D010089 1.3e-11 72.8 65 55.4
Sed0001808 Sechium edule HOM05D008114 ORTHO05D010089 1.3e-11 72.8 65 55.4
TAR535G0009 Trochodendron aralioides HOM05D008114 ORTHO05D010089 2.8e-11 71.6 70 57.1
Atru.chr9.903 Acer truncatum HOM05D008114 ORTHO05D010089 3.7e-11 71.2 67 62.7
CSS0032238 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 4.8e-11 70.9 65 52.3
TAR371G0741 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.4e-10 69.3 65 53.8
QL10p026513 Quercus lobata HOM05D008114 ORTHO05D010089 2.4e-10 68.6 65 47.7
Cfa019734 Carpinus fangiana HOM05D008114 ORTHO05D010089 5.3e-10 67.4 66 51.5
ClCG04G010920 Citrullus lanatus HOM05D008114 ORTHO05D010089 5.3e-10 67.4 66 50.0
Duzib205G1811 Durio zibethinus HOM05D008114 ORTHO05D010089 5.3e-10 67.4 65 55.4
Glyma.07G097200 Glycine max HOM05D008114 ORTHO05D010089 5.3e-10 67.4 64 53.1
Rhsim12G0141700 Rhododendron simsii HOM05D008114 ORTHO05D010089 5.3e-10 67.4 66 54.5
CsaV3_1G006920 Cucumis sativus L. HOM05D008114 ORTHO05D010089 9.0e-10 66.6 66 47.0
TAR426G0004 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.2e-09 66.2 70 54.3
MELO3C002108.2 Cucumis melo HOM05D008114 ORTHO05D010089 1.5e-09 65.9 66 47.0
Prupe.5G224700 Prunus persica HOM05D008114 ORTHO05D010089 4.5e-09 64.3 66 50.0
Hma1.2p1_1314F.1_g275000 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 5.8e-09 63.9 68 51.5
Hma1.2p1_2306F.1_g319355 Hydrangea macrophylla HOM05D008114 ORTHO05D010089 5.8e-09 63.9 68 51.5
CSS0047992 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 1.3e-08 62.8 50 60.0
Haze_18729 Corylus avellana HOM05D008114 ORTHO05D010089 1.3e-08 62.8 61 47.5
Dinv12222 Davidia involucrata HOM05D008114 ORTHO05D010089 3.8e-08 61.2 65 49.2
Glyma.09G180700 Glycine max HOM05D008114 ORTHO05D010089 3.8e-08 61.2 64 48.4
Nn4g23952 Nelumbo nucifera HOM05D008114 ORTHO05D010089 6.5e-08 60.5 69 49.3
CiPaw.16G088900 Carya illinoinensis HOM05D008114 ORTHO05D010089 8.4e-08 60.1 63 49.2
TAR622G0804 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.1e-07 59.7 69 50.7
TAR622G1122 Trochodendron aralioides HOM05D008114 ORTHO05D010089 1.1e-07 59.7 69 50.7
Ciclev10023125m.g Citrus clementina HOM05D008114 ORTHO05D010089 1.4e-07 59.3 62 58.1
Cpa.g.sc3.466 Carica papaya HOM05D008114 ORTHO05D010089 3.2e-07 58.2 59 44.1
Atru.chr11.236 Acer truncatum HOM05D008114 ORTHO05D010089 9.3e-07 56.6 68 47.1
CSS0031808 Camellia sinensis var. sinensis HOM05D008114 ORTHO05D010089 1.6e-06 55.8 71 47.9
Psat6g224640 Pisum sativum HOM05D021627 ORTHO05D021511 2.7e-06 55.1 68 47.1
FAN18G3335 Fragaria x ananassa HOM05D008114 ORTHO05D010089 3.5e-06 54.7 55 50.9
Manes.14G106800 Manihot esculenta HOM05D008114 ORTHO05D010089 3.5e-06 54.7 53 50.9
FAN08G3365 Fragaria x ananassa HOM05D008114 ORTHO05D010089 4.6e-06 54.3 55 50.9
FAN04G2580 Fragaria x ananassa HOM05D008114 ORTHO05D010089 6.0e-06 53.9 55 50.9


User provided reference genes

Program Settings