Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra12G0032200 Salix brachista HOM05D003094 ORTHO05D003482 1.9e-75 285.8 150 100.0
Potri.012G046000 Populus trichocarpa HOM05D003094 ORTHO05D003482 9.2e-62 240.4 152 86.8
MD14G1229900 Malus domestica HOM05D003094 ORTHO05D003482 4.6e-21 105.1 159 42.8
MD06G1220500 Malus domestica HOM05D003094 ORTHO05D003482 5.7e-19 98.2 159 40.9
Manes.01G015200 Manihot esculenta HOM05D003094 ORTHO05D003482 6.3e-18 94.7 136 44.9
Cfa019731 Carpinus fangiana HOM05D003094 ORTHO05D003482 2.6e-16 89.4 149 45.0
CiPaw.16G089200 Carya illinoinensis HOM05D003094 ORTHO05D003482 7.6e-16 87.8 144 43.8
Haze_18735 Corylus avellana HOM05D003094 ORTHO05D003482 2.2e-15 86.3 154 43.5
Gohir.A13G146900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 6.5e-15 84.7 155 39.4
TWI60G1358 Tripterygium wilfordii HOM05D003094 ORTHO05D003482 6.5e-15 84.7 160 41.2
Atru.chr9.905 Acer truncatum HOM05D003094 ORTHO05D003482 1.1e-14 84.0 164 39.6
Cfa019732 Carpinus fangiana HOM05D003094 ORTHO05D003482 1.1e-14 84.0 186 36.0
Gohir.D13G152004 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.1e-14 84.0 156 39.7
Dinv12225 Davidia involucrata HOM05D003094 ORTHO05D003482 1.4e-14 83.6 159 37.7
CANSAT80G1577 Cannabis sativa HOM05D003094 ORTHO05D003482 2.5e-14 82.8 159 42.8
Haze_18734 Corylus avellana HOM05D003094 ORTHO05D003482 2.5e-14 82.8 186 37.6
Dinv17506 Davidia involucrata HOM05D003094 ORTHO05D003482 2.5e-14 82.8 150 39.3
Dinv09627 Davidia involucrata HOM05D003094 ORTHO05D003482 9.3e-14 80.9 150 38.0
Dinv07353 Davidia involucrata HOM05D003094 ORTHO05D003482 1.2e-13 80.5 149 36.9
Gorai.013G170500 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.2e-13 80.5 155 38.7
CiPaw.16G089100 Carya illinoinensis HOM05D003094 ORTHO05D003482 1.6e-13 80.1 158 37.3
Cpa.g.sc51.5 Carica papaya HOM05D003094 ORTHO05D003482 2.1e-13 79.7 157 36.9
Gohir.D13G151300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.1e-13 79.7 156 39.1
Gohir.A13G146300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 3.6e-13 79.0 156 38.5
MELO3C017325.2 Cucumis melo HOM05D003094 ORTHO05D003482 1.4e-12 77.0 160 38.1
ClCG06G014600 Citrullus lanatus HOM05D003094 ORTHO05D003482 1.8e-12 76.6 160 38.1
TWI81G0976 Tripterygium wilfordii HOM05D003094 ORTHO05D003482 3.0e-12 75.9 148 39.2
MD06G1220600 Malus domestica HOM05D003094 ORTHO05D003482 5.1e-12 75.1 143 41.3
PGR044G0078 Punica granatum HOM05D003094 ORTHO05D003482 8.8e-12 74.3 159 37.7
PGR083G0382 Punica granatum HOM05D003094 ORTHO05D003482 8.8e-12 74.3 138 37.0
Gorai.013G169300 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.9e-11 73.2 153 35.3
BraA05t21983Z Brassica rapa HOM05D003094 ORTHO05D003482 4.3e-11 72.0 161 37.9
Ciclev10020325m.g Citrus clementina HOM05D003094 ORTHO05D003482 4.3e-11 72.0 164 36.0
RcHm_v2.0_Chr7g0179411 Rosa chinensis HOM05D003094 ORTHO05D003482 7.4e-11 71.2 146 36.3
QL10p026547 Quercus lobata HOM05D003094 ORTHO05D003482 9.7e-11 70.9 164 35.4
Duzib213G0897 Durio zibethinus HOM05D003094 ORTHO05D003482 1.3e-10 70.5 159 37.1
Atru.chr9.906 Acer truncatum HOM05D003094 ORTHO05D003482 1.7e-10 70.1 141 39.7
FAN13G1164 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.7e-10 70.1 108 40.7
Gorai.002G151500 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.7e-10 70.1 129 38.8
vmacro16434 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 1.7e-10 70.1 154 39.0
AL3G31470 Arabidopsis lyrata HOM05D003094 ORTHO05D003482 2.2e-10 69.7 162 38.9
A05p31440 Brassica napus HOM05D003094 ORTHO05D003482 2.2e-10 69.7 161 37.3
Thecc.07G091700 Theobroma cacao HOM05D003094 ORTHO05D003482 2.2e-10 69.7 158 37.3
GSVIVG01008338001 Vitis vinifera HOM05D003094 ORTHO05D003482 2.8e-10 69.3 160 37.5
Actinidia36579 Actinidia chinensis HOM05D003094 ORTHO05D003482 4.8e-10 68.6 157 38.2
Sed0020442 Sechium edule HOM05D003094 ORTHO05D003482 4.8e-10 68.6 160 36.9
Prupe.5G224900 Prunus persica HOM05D003094 ORTHO05D003482 6.3e-10 68.2 159 35.2
vmacro07219 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 6.3e-10 68.2 160 36.9
Actinidia19943 Actinidia chinensis HOM05D003094 ORTHO05D003482 8.2e-10 67.8 161 37.9
arahy.Tifrunner.gnm1.ann1.53L2ET Arachis hypogaea HOM05D010130 ORTHO05D010480 8.2e-10 67.8 152 35.5
ClCG04G010900 Citrullus lanatus HOM05D003094 ORTHO05D003482 1.1e-09 67.4 153 34.0
FAN04G1950 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.4e-09 67.0 108 39.8
Prupe.5G225000 Prunus persica HOM05D003094 ORTHO05D003482 1.4e-09 67.0 145 36.6
FAN05G2182 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.8e-09 66.6 160 37.5
Rhsim10G0183200 Rhododendron simsii HOM05D003094 ORTHO05D003482 1.8e-09 66.6 162 34.0
Carub.0003s1800 Capsella rubella HOM05D003094 ORTHO05D003482 2.4e-09 66.2 161 35.4
MELO3C002109.2 Cucumis melo HOM05D003094 ORTHO05D003482 2.4e-09 66.2 155 39.4
EL10Ac7g16627 Beta vulgaris HOM05D003094 ORTHO05D003482 3.1e-09 65.9 163 35.6
CsaV3_1G004020 Cucumis sativus L. HOM05D003094 ORTHO05D003482 4.1e-09 65.5 167 34.7
Sed0019035 Sechium edule HOM05D003094 ORTHO05D003482 4.1e-09 65.5 107 40.2
arahy.Tifrunner.gnm1.ann1.J45ZPD Arachis hypogaea HOM05D003094 ORTHO05D003482 6.9e-09 64.7 153 35.3
EL10Ac4g10181 Beta vulgaris HOM05D003094 ORTHO05D003482 6.9e-09 64.7 163 34.4
Eucgr.K02236 Eucalyptus grandis HOM05D003094 ORTHO05D003482 9.1e-09 64.3 172 34.3
BcaC05g28648 Brassica carinata HOM05D003094 ORTHO05D003482 1.2e-08 63.9 160 35.6
C05p47760 Brassica napus HOM05D003094 ORTHO05D003482 1.2e-08 63.9 161 36.0
BolC5t33491H Brassica oleracea HOM05D003094 ORTHO05D003482 1.2e-08 63.9 157 36.3
RcHm_v2.0_Chr2g0128201 Rosa chinensis HOM05D003094 ORTHO05D003482 1.2e-08 63.9 167 35.3
FAN02G1016 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.5e-08 63.5 160 36.9
FAN08G1507 Fragaria x ananassa HOM05D003094 ORTHO05D003482 2.0e-08 63.2 144 36.1
Gorai.003G056600 Gossypium raimondii HOM05D003094 ORTHO05D003482 2.0e-08 63.2 113 37.2
Nitab4.5_0001986g0080 Nicotiana tabacum HOM05D003094 ORTHO05D003482 2.0e-08 63.2 138 30.4
Duzib084G0458 Durio zibethinus HOM05D003094 ORTHO05D003482 2.6e-08 62.8 123 37.4
FvH4_6g26830 Fragaria vesca HOM05D003094 ORTHO05D003482 2.6e-08 62.8 160 36.2
Ca_11586_v3 Cicer arietinum L. HOM05D003094 ORTHO05D003482 3.4e-08 62.4 155 36.8
COL.COLO4_27184 Corchorus olitorius HOM05D003094 ORTHO05D003482 3.4e-08 62.4 160 35.6
Gohir.A07G059300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 3.4e-08 62.4 138 37.0
QL10p026559 Quercus lobata HOM05D003094 ORTHO05D003482 3.4e-08 62.4 111 40.5
Cc04_g06850 Coffea canephora HOM05D003094 ORTHO05D003482 5.9e-08 61.6 147 34.7
AUR62042498 Chenopodium quinoa HOM05D003094 ORTHO05D003482 7.7e-08 61.2 162 34.0
FvH4_5g16690 Fragaria vesca HOM05D003094 ORTHO05D003482 7.7e-08 61.2 159 35.2
FAN14G2495 Fragaria x ananassa HOM05D003094 ORTHO05D003482 7.7e-08 61.2 160 36.2
FAN18G0043 Fragaria x ananassa HOM05D003094 ORTHO05D003482 7.7e-08 61.2 159 34.6
AT3G18240 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 1.0e-07 60.8 158 33.5
CsaV3_1G006930 Cucumis sativus L. HOM05D003094 ORTHO05D003482 1.3e-07 60.5 143 38.5
Gorai.001G067600 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.7e-07 60.1 124 37.1
Manes.05G133000 Manihot esculenta HOM05D003094 ORTHO05D003482 1.7e-07 60.1 158 34.8
SGA_v2.0_scaffold29G12062 Striga asiatica HOM05D003094 ORTHO05D003482 1.7e-07 60.1 172 30.8
Thhalv10020806m.g Eutrema salsugineum HOM05D003094 ORTHO05D003482 2.9e-07 59.3 159 35.8
THA.LOC104820380 Tarenaya hassleriana HOM05D003094 ORTHO05D003482 2.9e-07 59.3 160 36.2
arahy.Tifrunner.gnm1.ann1.2IG2A1 Arachis hypogaea HOM05D003094 ORTHO05D003482 3.8e-07 58.9 153 34.0
arahy.Tifrunner.gnm1.ann1.D1K70W Arachis hypogaea HOM05D003094 ORTHO05D003482 3.8e-07 58.9 153 34.0
Cpa.g.sc3.463 Carica papaya HOM05D003094 ORTHO05D003482 3.8e-07 58.9 143 36.4
Gohir.D07G064100 Gossypium hirsutum HOM05D003094 ORTHO05D003482 5.0e-07 58.5 124 36.3
HanXRQChr17g0558961 Helianthus annuus HOM05D003094 ORTHO05D003482 5.0e-07 58.5 102 40.2
PGSC0003DMG401005733 Solanum tuberosum HOM05D003094 ORTHO05D003482 5.0e-07 58.5 139 31.7
PSO017G6706 Papaver somniferum HOM05D003094 ORTHO05D003482 6.5e-07 58.2 151 31.8
THA.LOC104812151 Tarenaya hassleriana HOM05D003094 ORTHO05D003482 6.5e-07 58.2 115 40.9
Gohir.D08G096900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 8.5e-07 57.8 119 37.0
PSO063G0897 Papaver somniferum HOM05D003094 ORTHO05D003482 1.1e-06 57.4 151 33.1
Rhsim12G0141600 Rhododendron simsii HOM05D003094 ORTHO05D003482 1.1e-06 57.4 180 32.8
VMungo0464G0085 Vigna mungo HOM05D013688 ORTHO05D013355 1.1e-06 57.4 157 35.0
Aa31LG8G5090 Aethionema arabicum HOM05D003094 ORTHO05D003482 1.9e-06 56.6 162 35.8
Gohir.D05G318800 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.9e-06 56.6 81 42.0
Gorai.001G159100 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.9e-06 56.6 81 40.7
MBI16_g44830_MAGBIO Magnolia biondii HOM05D003094 ORTHO05D003482 1.9e-06 56.6 162 34.0
Psat7g083520 Pisum sativum HOM05D003094 ORTHO05D003482 1.9e-06 56.6 152 33.6
Potri.015G044100 Populus trichocarpa HOM05D003094 ORTHO05D003482 1.9e-06 56.6 158 32.3
Hma1.2p1_1283F.1_g272860 Hydrangea macrophylla HOM05D003094 ORTHO05D003482 3.2e-06 55.8 71 36.6
Peaxi162Scf00683g00019 Petunia axillaris HOM05D003094 ORTHO05D003482 3.2e-06 55.8 138 29.0
SHI53281 Sapria himalayana HOM05D003094 ORTHO05D003482 3.2e-06 55.8 162 33.3
CAN.G1129.14 Capsicum annuum HOM05D003094 ORTHO05D003482 5.5e-06 55.1 95 32.6
Sp3g16360 Schrenkiella parvula HOM05D003094 ORTHO05D003482 5.5e-06 55.1 174 32.2
Actinidia35101 Actinidia chinensis HOM05D003094 ORTHO05D003482 7.2e-06 54.7 124 33.1
Gohir.D09G047900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 7.2e-06 54.7 131 38.2
Lsat_1_v5_gn_2_64400 Lactuca sativa HOM05D003094 ORTHO05D003482 7.2e-06 54.7 159 30.2


User provided reference genes

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