Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra12G0021600 Salix brachista HOM05D004891 ORTHO05D005997 3.3e-195 684.9 352 100.0
Potri.012G032200 Populus trichocarpa HOM05D004891 ORTHO05D005997 1.4e-129 466.8 353 74.2
Potri.015G022900 Populus trichocarpa HOM05D004891 ORTHO05D005997 5.1e-111 405.2 350 68.6
Sabra15G0017200 Salix brachista HOM05D004891 ORTHO05D005997 1.5e-110 403.7 358 68.7
QL09p011070 Quercus lobata HOM05D004891 ORTHO05D005997 1.7e-90 337.0 352 55.7
CiPaw.05G258300 Carya illinoinensis HOM05D004891 ORTHO05D005997 1.1e-89 334.3 354 55.6
Thecc.03G192100 Theobroma cacao HOM05D004891 ORTHO05D005997 1.9e-89 333.6 353 56.9
Duzib084G0775 Durio zibethinus HOM05D004891 ORTHO05D005997 5.5e-89 332.0 352 57.1
Manes.14G018900 Manihot esculenta HOM05D004891 ORTHO05D005997 1.2e-88 330.9 352 56.2
Haze_00106 Corylus avellana HOM05D004891 ORTHO05D005997 1.3e-87 327.4 355 54.4
Cfa016358 Carpinus fangiana HOM05D004891 ORTHO05D005997 3.9e-87 325.9 359 54.6
COL.COLO4_35665 Corchorus olitorius HOM05D004891 ORTHO05D005997 5.1e-87 325.5 348 56.6
Dinv28341 Davidia involucrata HOM05D004891 ORTHO05D005997 5.7e-86 322.0 356 54.2
Gohir.A12G252100 Gossypium hirsutum HOM05D004891 ORTHO05D005997 2.1e-85 320.1 352 54.0
Gohir.D12G253400 Gossypium hirsutum HOM05D004891 ORTHO05D005997 3.7e-85 319.3 352 53.7
Gorai.008G271100 Gossypium raimondii HOM05D004891 ORTHO05D005997 3.7e-85 319.3 352 53.7
FAN03G3090 Fragaria x ananassa HOM05D004891 ORTHO05D005997 3.1e-84 316.2 357 53.2
FAN06G0473 Fragaria x ananassa HOM05D004891 ORTHO05D005997 3.1e-84 316.2 359 52.4
Ciclev10005604m.g Citrus clementina HOM05D004891 ORTHO05D005997 5.3e-84 315.5 355 54.6
Cpa.g.sc3.45 Carica papaya HOM05D004891 ORTHO05D005997 9.0e-84 314.7 353 53.3
Manes.06G156500 Manihot esculenta HOM05D004891 ORTHO05D005997 1.2e-83 314.3 353 54.1
RcHm_v2.0_Chr1g0380031 Rosa chinensis HOM05D004891 ORTHO05D005997 1.5e-83 313.9 353 52.7
Lj3A911G21 Lonicera japonica HOM05D004891 ORTHO05D005997 2.0e-83 313.5 358 53.6
TAR375G0232 Trochodendron aralioides HOM05D004891 ORTHO05D005997 4.5e-83 312.4 360 53.9
GSVIVG01028731001 Vitis vinifera HOM05D004891 ORTHO05D005997 4.2e-81 305.8 354 53.4
Actinidia08623 Actinidia chinensis HOM05D004891 ORTHO05D005997 9.3e-81 304.7 357 51.5
FAN10G2020 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.2e-80 304.3 361 51.0
FAN10G2063 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.2e-80 304.3 361 51.0
FAN06G4508 Fragaria x ananassa HOM05D004891 ORTHO05D005997 7.9e-80 301.6 359 50.7
FvH4_7g30940 Fragaria vesca HOM05D004891 ORTHO05D005997 1.3e-79 300.8 359 50.4
FAN01G2480 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.8e-79 300.4 361 50.7
MD07G1284300 Malus domestica HOM05D004891 ORTHO05D005997 6.7e-79 298.5 354 51.4
Prupe.2G306500 Prunus persica HOM05D004891 ORTHO05D005997 6.7e-79 298.5 353 51.8
CSS0046287 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 3.3e-78 296.2 359 51.8
Hma1.2p1_0327F.1_g126710 Hydrangea macrophylla HOM05D004891 ORTHO05D005997 3.3e-78 296.2 357 51.0
CiPaw.06G007100 Carya illinoinensis HOM05D004891 ORTHO05D005997 7.4e-78 295.0 356 51.7
TWI14G0964 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 8.2e-77 291.6 353 50.7
TWI23G0467 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 2.0e-75 287.0 352 51.1
Actinidia34190 Actinidia chinensis HOM05D004891 ORTHO05D005997 2.6e-75 286.6 348 49.7
arahy.Tifrunner.gnm1.ann1.PB2THD Arachis hypogaea HOM05D004891 ORTHO05D005997 2.6e-75 286.6 353 49.0
arahy.Tifrunner.gnm1.ann1.6V5JG4 Arachis hypogaea HOM05D004891 ORTHO05D005997 4.5e-75 285.8 353 49.0
Glyma.13G040300 Glycine max HOM05D004891 ORTHO05D005997 1.3e-74 284.3 360 47.5
MBI06_g22405_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D005997 6.5e-74 282.0 357 47.6
PSO170G4664 Papaver somniferum HOM05D004891 ORTHO05D005997 6.5e-74 282.0 360 49.2
Lalb_Chr01g0014881 Lupinus albus HOM05D004891 ORTHO05D005997 8.5e-74 281.6 353 49.3
Nitab4.5_0000473g0100 Nicotiana tabacum HOM05D004891 ORTHO05D005997 8.5e-74 281.6 356 48.3
Rhsim03G0198300 Rhododendron simsii HOM05D004891 ORTHO05D005997 1.4e-73 280.8 361 48.8
ClCG05G008660 Citrullus lanatus HOM05D004891 ORTHO05D005997 2.5e-73 280.0 352 47.2
SalBow2G0402 Salvia bowleyana HOM05D004891 ORTHO05D005997 3.2e-73 279.6 353 49.9
Medtr1g028580 Medicago truncatula HOM05D004891 ORTHO05D005997 5.5e-73 278.9 356 48.9
PSO063G3645 Papaver somniferum HOM05D004891 ORTHO05D005997 9.4e-73 278.1 360 48.6
MD01G1214600 Malus domestica HOM05D004891 ORTHO05D005997 2.1e-72 276.9 354 48.6
TPR.G33305 Trifolium pratense HOM05D004891 ORTHO05D005997 2.1e-72 276.9 356 48.9
Nn7g37380 Nelumbo nucifera HOM05D004891 ORTHO05D005997 2.7e-72 276.6 360 50.0
MELO3C006974.2 Cucumis melo HOM05D004891 ORTHO05D005997 7.9e-72 275.0 352 46.9
CsaV3_3G021850 Cucumis sativus L. HOM05D004891 ORTHO05D005997 7.9e-72 275.0 352 47.7
Glyma.14G123700 Glycine max HOM05D004891 ORTHO05D005997 1.8e-71 273.9 356 47.2
Nitab4.5_0000472g0010 Nicotiana tabacum HOM05D004891 ORTHO05D005997 1.1e-70 271.2 357 47.9
THA.LOC104825132 Tarenaya hassleriana HOM05D004891 ORTHO05D005997 1.1e-70 271.2 353 47.0
PGR142G0227 Punica granatum HOM05D004891 ORTHO05D005997 2.5e-70 270.0 353 48.2
Lj1g0012174 Lotus japonicus HOM05D004891 ORTHO05D005997 4.3e-70 269.2 359 48.7
Sp6g15430 Schrenkiella parvula HOM05D004891 ORTHO05D005997 9.7e-70 268.1 350 46.0
Phvul.008G159100 Phaseolus vulgaris HOM05D004891 ORTHO05D005997 1.3e-69 267.7 356 47.2
Carub.0008s1346 Capsella rubella HOM05D004891 ORTHO05D005997 1.7e-69 267.3 351 45.6
AT5G53280 Arabidopsis thaliana HOM05D004891 ORTHO05D005997 3.7e-69 266.2 350 46.3
CANSAT21G1757 Cannabis sativa HOM05D004891 ORTHO05D005997 6.3e-69 265.4 353 48.2
Cc02_g01930 Coffea canephora HOM05D004891 ORTHO05D005997 6.3e-69 265.4 367 48.0
Thhalv10014380m.g Eutrema salsugineum HOM05D004891 ORTHO05D005997 1.1e-68 264.6 350 46.0
vmacro06579 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 1.1e-68 264.6 479 41.1
CARHR266320 Cardamine hirsuta HOM05D004891 ORTHO05D005997 5.3e-68 262.3 350 45.4
MSTRG.8493 Avicennia marina HOM05D004891 ORTHO05D005997 9.1e-68 261.5 358 46.9
EL10Ac3g05352 Beta vulgaris HOM05D004891 ORTHO05D005997 2.0e-67 260.4 353 46.7
AL8G27930 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 1.0e-66 258.1 350 45.4
VMungo0647G1360 Vigna mungo HOM05D004891 ORTHO05D005997 1.0e-66 258.1 348 46.6
CAN.G108.22 Capsicum annuum HOM05D004891 ORTHO05D005997 1.3e-66 257.7 357 46.8
SGA_v2.0_scaffold10G05259 Striga asiatica HOM05D004891 ORTHO05D005997 2.2e-66 256.9 355 46.5
HanXRQChr14g0462811 Helianthus annuus HOM05D004891 ORTHO05D005997 2.9e-66 256.5 365 47.4
Sopen03g003400 Solanum pennellii HOM05D004891 ORTHO05D005997 2.9e-66 256.5 359 46.5
Sopen03g003460 Solanum pennellii HOM05D004891 ORTHO05D005997 2.9e-66 256.5 359 46.5
AUR62031485 Chenopodium quinoa HOM05D004891 ORTHO05D005997 3.2e-65 253.1 362 45.0
vmacro23247 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 3.2e-65 253.1 516 38.4
PGSC0003DMG400009098 Solanum tuberosum HOM05D004891 ORTHO05D005997 1.2e-64 251.1 355 47.0
Psat6g039240 Pisum sativum HOM05D004891 ORTHO05D005997 1.6e-64 250.8 309 49.5
BcaB08g35688 Brassica carinata HOM05D004891 ORTHO05D005997 2.3e-63 246.9 351 43.3
Migut.F01055 Erythranthe guttata HOM05D004891 ORTHO05D005997 8.8e-63 245.0 355 44.8
Oeu037109.1 Olea europaea HOM05D004891 ORTHO05D005997 1.5e-62 244.2 364 43.4
Sed0021890 Sechium edule HOM05D004891 ORTHO05D005997 4.4e-62 242.7 352 44.0
Lsat_1_v5_gn_2_134260 Lactuca sativa HOM05D004891 ORTHO05D005997 1.1e-60 238.0 360 45.8
Eucgr.K00322 Eucalyptus grandis HOM05D004891 ORTHO05D005997 1.4e-60 237.7 349 45.6
ECA238G3691 Erigeron canadensis HOM05D004891 ORTHO05D005997 2.4e-60 236.9 362 45.3
A03p15250 Brassica napus HOM05D004891 ORTHO05D005997 4.1e-60 236.1 349 43.3
Aa31LG3G9250 Aethionema arabicum HOM05D004891 ORTHO05D005997 5.3e-60 235.7 349 43.8
C03p17830 Brassica napus HOM05D004891 ORTHO05D005997 5.3e-60 235.7 351 43.0
BolC3t14190H Brassica oleracea HOM05D004891 ORTHO05D005997 5.3e-60 235.7 351 43.0
Aqoxy5G04112 Aquilegia oxysepala HOM05D004891 ORTHO05D005997 1.2e-59 234.6 354 44.4
BcaB01g04239 Brassica carinata HOM05D004891 ORTHO05D005997 4.5e-59 232.6 353 42.8
Hund11687 Selenicereus undatus HOM05D004891 ORTHO05D005997 4.5e-59 232.6 352 43.8
BraA03t10818Z Brassica rapa HOM05D004891 ORTHO05D005997 1.0e-58 231.5 348 42.8
Oeu024464.1 Olea europaea HOM05D004891 ORTHO05D005997 1.7e-58 230.7 356 41.9
Sc19g0001110 Simmondsia chinensis HOM05D004891 ORTHO05D005997 1.7e-58 230.7 349 44.1
Actinidia03156 Actinidia chinensis HOM05D004891 ORTHO05D005997 2.9e-58 229.9 358 44.1
Hund11688 Selenicereus undatus HOM05D004891 ORTHO05D005997 1.1e-57 228.0 352 42.9
BcaC01g06235 Brassica carinata HOM05D004891 ORTHO05D005997 9.4e-57 224.9 317 43.2
Ah.07g206050 Amaranthus hybridus HOM05D004891 ORTHO05D005997 1.8e-55 220.7 353 43.1
Sed0007260 Sechium edule HOM05D004891 ORTHO05D005997 5.2e-55 219.2 352 41.5
Actinidia34193 Actinidia chinensis HOM05D004891 ORTHO05D005997 9.7e-54 214.9 348 42.0
Hund04825 Selenicereus undatus HOM05D004891 ORTHO05D005997 1.3e-53 214.5 355 42.5
CDE10G0607 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 2.2e-53 213.8 355 41.4
BcaC04g20477 Brassica carinata HOM05D004891 ORTHO05D005997 3.7e-53 213.0 352 40.6
C09p43070 Brassica napus HOM05D004891 ORTHO05D005997 3.7e-53 213.0 352 40.6
BolC9t57178H Brassica oleracea HOM05D004891 ORTHO05D005997 3.7e-53 213.0 352 40.6
HPP92_024018 Vanilla planifolia HOM05D004891 ORTHO05D005997 1.8e-52 210.7 353 39.4
A10p10800 Brassica napus HOM05D004891 ORTHO05D005997 3.5e-51 206.5 352 40.9
BraA10t43162Z Brassica rapa HOM05D004891 ORTHO05D005997 3.5e-51 206.5 352 40.6
Dinv35303 Davidia involucrata HOM05D004891 ORTHO05D005997 1.7e-50 204.1 261 49.0
TAR374G1584 Trochodendron aralioides HOM05D004891 ORTHO05D005997 2.9e-50 203.4 241 50.6
CSS0025805 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 1.5e-49 201.1 171 64.9
CDE10G1089 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 2.5e-49 200.3 355 40.0
unitig_90.g27528 Utricularia gibba HOM05D004891 ORTHO05D005997 2.7e-48 196.8 349 40.1
ATR1093G054 Amborella trichopoda HOM05D004891 ORTHO05D005997 2.9e-42 176.8 366 37.4
Lj1C1012T12 Lonicera japonica HOM05D004891 ORTHO05D005997 6.5e-42 175.6 347 39.2
AUR62021048 Chenopodium quinoa HOM05D004891 ORTHO05D005997 3.6e-40 169.9 211 48.3
DCAR_014529 Daucus carota HOM05D004891 ORTHO05D005997 1.5e-38 164.5 177 51.4
Ah.13g069830 Amaranthus hybridus HOM05D004891 ORTHO05D005997 4.9e-37 159.5 356 36.0
MSTRG.23354 Avicennia marina HOM05D004891 ORTHO05D005997 1.0e-34 151.8 175 51.4
unitig_736.g22889 Utricularia gibba HOM05D004891 ORTHO05D005997 2.5e-33 147.1 354 35.6
AL8G27980 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 7.3e-33 145.6 147 52.4
Zm00001eb237900 Zea mays HOM05D004891 ORTHO05D005997 7.3e-33 145.6 302 37.4
Atru.chr1.279 Acer truncatum HOM05D004891 ORTHO05D005997 2.6e-30 137.1 117 68.4
Peaxi162Scf00904g00326 Petunia axillaris HOM05D004891 ORTHO05D005997 3.4e-30 136.7 210 46.2
Solyc03g007500.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 7.5e-30 135.6 215 42.3
Solyc03g007440.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 4.9e-29 132.9 215 41.9
Os01g0224200 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 5.9e-27 125.9 358 32.7
Zm00001eb203870 Zea mays HOM05D004891 ORTHO05D005997 1.0e-26 125.2 177 43.5
MSTRG.62 Avicennia marina HOM05D004891 ORTHO05D005997 2.5e-25 120.6 118 55.1
Oeu036883.1 Olea europaea HOM05D004891 ORTHO05D005997 4.3e-25 119.8 220 41.4
Os06g0506000 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 2.1e-24 117.5 338 31.4
Oeu036884.1 Olea europaea HOM05D004891 ORTHO05D005997 1.5e-22 111.3 116 56.0
Zm00001eb338960 Zea mays HOM05D004891 ORTHO05D005997 2.4e-20 104.0 360 30.0
TAR629G2914 Trochodendron aralioides HOM05D004891 ORTHO05D005997 1.0e-18 98.6 343 30.0
CDE02G0860 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 3.0e-18 97.1 353 29.5
Sabra10G0105200 Salix brachista HOM05D004891 ORTHO05D005997 6.6e-18 95.9 85 70.6
Sabra15G0071500 Salix brachista HOM05D004891 ORTHO05D005997 6.6e-18 95.9 85 70.6
Thecc.01G303500 Theobroma cacao HOM05D004891 ORTHO05D005997 6.6e-18 95.9 162 41.4
Sabra12G0063200 Salix brachista HOM05D004891 ORTHO05D005997 6.2e-16 89.4 85 69.4
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 2.4e-12 77.4 190 30.5
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 4.7e-08 63.2 225 28.4
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 4.4e-06 56.6 228 27.6
Pp3c1_32220 Physcomitrium patens HOM05D001401 ORTHO05D006368 4.4e-06 56.6 50 50.0
Zm00001eb192840 Zea mays HOM05D004891 ORTHO05D005997 4.4e-06 56.6 114 36.0
SEGI_25677 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 7.6e-06 55.8 82 36.6


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