Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 3.2e-52 208.0 96 100.0
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 3.2e-52 208.0 96 100.0
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 1.2e-51 206.1 94 100.0
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.8e-47 192.2 92 89.1
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.8e-47 192.2 92 89.1
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 2.4e-47 191.8 91 90.1
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 2.4e-47 191.8 92 87.0
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 4.1e-47 191.0 92 89.1
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 4.1e-47 191.0 90 91.1
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 9.1e-47 189.9 92 84.8
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 1.2e-46 189.5 91 89.0
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 1.2e-46 189.5 91 89.0
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 2.0e-46 188.7 92 85.9
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 2.7e-46 188.3 92 88.0
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 2.7e-46 188.3 91 89.0
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 2.7e-46 188.3 91 89.0
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 4.5e-46 187.6 92 88.0
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 4.5e-46 187.6 90 91.1
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 4.5e-46 187.6 92 85.9
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 5.9e-46 187.2 91 87.9
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 5.9e-46 187.2 92 87.0
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 7.7e-46 186.8 91 86.8
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 1.0e-45 186.4 90 90.0
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 1.3e-45 186.0 92 87.0
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 1.7e-45 185.7 92 87.0
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 2.3e-45 185.3 92 85.9
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 2.3e-45 185.3 90 87.8
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 2.9e-45 184.9 92 85.9
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 5.0e-45 184.1 92 85.9
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 5.0e-45 184.1 89 88.8
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.1e-44 183.0 90 86.7
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.1e-44 183.0 90 86.7
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 1.1e-44 183.0 94 79.8
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 1.5e-44 182.6 92 84.8
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 1.9e-44 182.2 89 87.6
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 1.9e-44 182.2 92 85.9
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 1.9e-44 182.2 91 84.6
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 1.9e-44 182.2 92 81.5
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 2.5e-44 181.8 92 84.8
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.5e-44 181.8 92 84.8
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 3.3e-44 181.4 94 79.8
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 3.3e-44 181.4 92 81.5
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 3.3e-44 181.4 91 83.5
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 4.2e-44 181.0 92 80.4
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 4.2e-44 181.0 92 80.4
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 4.2e-44 181.0 92 82.6
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 4.2e-44 181.0 92 81.5
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 4.2e-44 181.0 92 80.4
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 4.2e-44 181.0 92 80.4
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.5e-44 180.6 91 82.4
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.5e-44 180.6 91 82.4
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 5.5e-44 180.6 92 81.5
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 5.5e-44 180.6 92 84.8
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 7.2e-44 180.3 92 81.5
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 7.2e-44 180.3 92 81.5
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 7.2e-44 180.3 92 81.5
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 9.5e-44 179.9 92 81.5
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 1.6e-43 179.1 91 81.3
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 2.1e-43 178.7 92 80.4
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 2.8e-43 178.3 89 85.4
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 2.8e-43 178.3 92 77.2
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 2.8e-43 178.3 90 83.3
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.8e-43 178.3 92 83.7
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 3.6e-43 177.9 92 78.3
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 3.6e-43 177.9 92 79.3
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 3.6e-43 177.9 92 77.2
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 3.6e-43 177.9 89 83.1
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 4.7e-43 177.6 92 81.5
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 4.7e-43 177.6 90 82.2
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 8.0e-43 176.8 92 79.3
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 1.0e-42 176.4 88 88.6
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.4e-42 176.0 91 80.2
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.4e-42 176.0 92 79.3
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 1.8e-42 175.6 90 84.4
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 1.8e-42 175.6 90 84.4
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 1.8e-42 175.6 92 82.6
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 2.3e-42 175.3 92 79.3
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 3.0e-42 174.9 112 71.4
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 3.0e-42 174.9 89 82.0
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 3.0e-42 174.9 89 83.1
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 8.9e-42 173.3 89 84.3
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 8.9e-42 173.3 89 84.3
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 8.9e-42 173.3 91 78.0
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 1.2e-41 172.9 91 79.1
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 1.2e-41 172.9 92 81.5
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 2.0e-41 172.2 91 78.0
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 2.0e-41 172.2 92 81.5
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.0e-41 172.2 94 79.8
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 2.6e-41 171.8 91 78.0
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 7.5e-41 170.2 92 78.3
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 7.5e-41 170.2 90 81.1
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 9.8e-41 169.9 114 67.5
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 1.7e-40 169.1 91 76.9
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 2.2e-40 168.7 91 80.2
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 2.8e-40 168.3 96 78.1
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 8.3e-40 166.8 88 78.4
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 8.3e-40 166.8 88 78.4
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 1.1e-39 166.4 88 76.1
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 1.8e-39 165.6 85 81.2
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.8e-39 165.6 90 78.9
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 4.1e-39 164.5 90 75.6
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 1.7e-37 159.1 77 87.0
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 2.3e-37 158.7 91 73.6
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 2.9e-37 158.3 92 71.7
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 3.9e-37 157.9 86 76.7
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 5.0e-37 157.5 89 73.0
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 5.0e-37 157.5 89 77.5
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 5.0e-37 157.5 92 72.8
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 8.6e-37 156.8 89 75.3
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 8.6e-37 156.8 89 75.3
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 8.6e-37 156.8 89 75.3
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 8.6e-37 156.8 89 75.3
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 8.6e-37 156.8 81 79.0
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 1.1e-36 156.4 89 75.3
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 1.5e-36 156.0 89 74.2
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 2.5e-36 155.2 89 74.2
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 2.5e-36 155.2 89 74.2
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 2.5e-36 155.2 89 74.2
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 2.5e-36 155.2 89 74.2
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 2.5e-36 155.2 89 74.2
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 4.3e-36 154.5 89 74.2
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 5.6e-36 154.1 89 75.3
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 8.0e-35 150.2 101 65.3
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.7e-32 141.4 76 81.6
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.9e-31 139.0 78 78.2
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 4.6e-30 134.4 87 64.4
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 1.0e-29 133.3 72 77.8
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 2.3e-29 132.1 69 78.3
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 3.3e-28 128.3 65 81.5
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 1.1e-26 123.2 208 33.7
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 8.9e-26 120.2 68 79.4
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 6.4e-24 114.0 60 83.3
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 1.4e-23 112.8 60 83.3
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 7.1e-23 110.5 73 68.5
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 2.2e-16 89.0 68 54.4
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 1.9e-15 85.9 68 50.0
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 3.9e-13 78.2 60 58.3
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 1.6e-11 72.8 36 80.6
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 2.2e-08 62.4 62 41.9


User provided reference genes

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