Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0148200 Salix brachista HOM05D005424 ORTHO05D006726 0.0e+00 1333.5 721 100.0
Potri.011G152600 Populus trichocarpa HOM05D005424 ORTHO05D006726 0.0e+00 1167.1 722 89.1
Potri.001G448900 Populus trichocarpa HOM05D005424 ORTHO05D006726 1.1e-290 1003.0 727 78.1
Sabra16G0303000 Salix brachista HOM05D005424 ORTHO05D006726 7.6e-279 963.8 715 76.1
Manes.01G055600 Manihot esculenta HOM05D005424 ORTHO05D006726 2.8e-188 662.9 731 58.4
CiPaw.11G110500 Carya illinoinensis HOM05D005424 ORTHO05D006726 4.6e-183 645.6 732 56.1
Cfa011902 Carpinus fangiana HOM05D005424 ORTHO05D006726 2.1e-175 620.2 741 55.9
Atru.chr9.1859 Acer truncatum HOM05D005424 ORTHO05D006726 1.9e-173 613.6 688 56.5
Dinv12891 Davidia involucrata HOM05D005424 ORTHO05D006726 5.2e-171 605.5 722 56.0
GSVIVG01019675001 Vitis vinifera HOM05D005424 ORTHO05D006726 1.7e-169 600.5 707 56.4
QL02p027371 Quercus lobata HOM05D005424 ORTHO05D006726 2.1e-167 593.6 734 54.1
Ciclev10018587m.g Citrus clementina HOM05D005424 ORTHO05D006726 7.3e-165 585.1 729 53.4
Thecc.03G218200 Theobroma cacao HOM05D005424 ORTHO05D006726 2.9e-161 573.2 732 54.0
Prupe.5G132500 Prunus persica HOM05D005424 ORTHO05D006726 4.9e-161 572.4 703 54.6
TWI81G0285 Tripterygium wilfordii HOM05D005424 ORTHO05D006726 6.4e-161 572.0 689 54.3
COL.COLO4_10822 Corchorus olitorius HOM05D005424 ORTHO05D006726 6.9e-155 552.0 725 51.9
Dinv18754 Davidia involucrata HOM05D005424 ORTHO05D006726 1.2e-154 551.2 740 52.8
Haze_09196 Corylus avellana HOM05D005424 ORTHO05D006726 6.0e-151 538.9 742 51.8
Gohir.A12G241300 Gossypium hirsutum HOM05D005424 ORTHO05D006726 7.4e-149 531.9 725 50.1
FvH4_5g10620 Fragaria vesca HOM05D005424 ORTHO05D006726 9.6e-149 531.6 700 52.0
Gorai.008G259800 Gossypium raimondii HOM05D005424 ORTHO05D006726 3.7e-148 529.6 724 49.7
Duzib205G0106 Durio zibethinus HOM05D005424 ORTHO05D006726 4.0e-147 526.2 737 50.5
MD06G1121800 Malus domestica HOM05D005424 ORTHO05D006726 6.9e-147 525.4 701 51.1
Gohir.D12G242600 Gossypium hirsutum HOM05D005424 ORTHO05D006726 1.5e-146 524.2 726 49.7
RcHm_v2.0_Chr7g0187521 Rosa chinensis HOM05D005424 ORTHO05D006726 3.8e-145 519.6 648 53.7
FAN18G4434 Fragaria x ananassa HOM05D005424 ORTHO05D006726 6.5e-145 518.8 724 50.3
FAN13G2865 Fragaria x ananassa HOM05D005424 ORTHO05D006726 4.2e-144 516.2 701 51.6
CANSAT21G2321 Cannabis sativa HOM05D005424 ORTHO05D006726 1.2e-143 514.6 711 49.2
FAN08G3416 Fragaria x ananassa HOM05D005424 ORTHO05D006726 6.7e-142 508.8 699 51.4
CSS0028831 Camellia sinensis var. sinensis HOM05D005424 ORTHO05D006726 8.2e-140 501.9 670 52.4
Cpa.g.sc37.92 Carica papaya HOM05D005424 ORTHO05D006726 6.9e-139 498.8 717 49.0
TAR636G1325 Trochodendron aralioides HOM05D005424 ORTHO05D006726 1.1e-136 491.5 516 60.7
Duzib068G1314 Durio zibethinus HOM05D005424 ORTHO05D006726 2.5e-136 490.3 722 48.8
Rhsim07G0076500 Rhododendron simsii HOM05D005424 ORTHO05D006726 4.6e-135 486.1 691 48.9
vmacro13840 Vaccinium macrocarpon HOM05D005424 ORTHO05D006726 2.6e-130 470.3 700 48.9
Glyma.20G217700 Glycine max HOM05D005424 ORTHO05D006726 7.2e-128 462.2 711 49.5
ClCG08G001970 Citrullus lanatus HOM05D005424 ORTHO05D006726 7.9e-127 458.8 740 46.4
VMungo0720G0206 Vigna mungo HOM05D005424 ORTHO05D006726 1.1e-125 454.9 712 47.8
arahy.Tifrunner.gnm1.ann1.BAML4E Arachis hypogaea HOM05D005424 ORTHO05D006726 1.5e-125 454.5 697 46.6
Glyma.10G172500 Glycine max HOM05D005424 ORTHO05D006726 1.5e-125 454.5 712 48.0
Medtr1g077940 Medicago truncatula HOM05D005424 ORTHO05D006726 1.3e-124 451.4 703 47.5
CsaV3_6G002490 Cucumis sativus L. HOM05D005424 ORTHO05D006726 4.8e-124 449.5 734 45.9
Ca_09953_v3 Cicer arietinum L. HOM05D005424 ORTHO05D006726 1.4e-123 448.0 707 46.5
Lalb_Chr21g0311601 Lupinus albus HOM05D005424 ORTHO05D006726 1.8e-123 447.6 701 47.6
Lj5g0003487 Lotus japonicus HOM05D005424 ORTHO05D006726 3.1e-123 446.8 689 48.2
Eucgr.D01670 Eucalyptus grandis HOM05D005424 ORTHO05D006726 8.5e-121 438.7 704 47.4
Phvul.L004801 Phaseolus vulgaris HOM05D005424 ORTHO05D006726 7.2e-120 435.6 728 46.0
MELO3C025037.2 Cucumis melo HOM05D005424 ORTHO05D006726 2.7e-119 433.7 736 45.1
Psat6g052720 Pisum sativum HOM05D005424 ORTHO05D006726 2.7e-119 433.7 700 46.0
Lalb_Chr21g0311581 Lupinus albus HOM05D005424 ORTHO05D006726 2.2e-116 424.1 706 45.0
Solyc08g083290.4 Solanum lycopersicum HOM05D005424 ORTHO05D006726 2.2e-116 424.1 655 47.3
Nitab4.5_0002520g0100 Nicotiana tabacum HOM05D005424 ORTHO05D006726 1.1e-115 421.8 705 45.1
Sopen08g031500 Solanum pennellii HOM05D005424 ORTHO05D006726 3.1e-115 420.2 654 46.8
Nitab4.5_0003419g0090 Nicotiana tabacum HOM05D005424 ORTHO05D006726 6.5e-113 412.5 705 44.8
PSO063G2765 Papaver somniferum HOM05D005424 ORTHO05D006726 4.7e-111 406.4 640 46.6
Cc08_g16940 Coffea canephora HOM05D005424 ORTHO05D006726 1.0e-110 405.2 601 48.4
Lj2A154T41 Lonicera japonica HOM05D005424 ORTHO05D006726 4.4e-109 399.8 713 46.4
Nn7g38300 Nelumbo nucifera HOM05D005424 ORTHO05D006726 1.1e-107 395.2 728 43.7
Sc01g0010800 Simmondsia chinensis HOM05D005424 ORTHO05D006726 1.8e-107 394.4 684 44.3
PSO782G1858 Papaver somniferum HOM05D005424 ORTHO05D006726 4.1e-107 393.3 695 43.7
Peaxi162Scf00074g00151 Petunia axillaris HOM05D005424 ORTHO05D006726 1.1e-104 385.2 607 47.0
THA.LOC104806458 Tarenaya hassleriana HOM05D005424 ORTHO05D006726 2.1e-103 380.9 651 46.2
EL10Ac5g12404 Beta vulgaris HOM05D005424 ORTHO05D006726 2.7e-103 380.6 694 43.9
CAN.G567.102 Capsicum annuum HOM05D005424 ORTHO05D006726 4.7e-103 379.8 622 45.2
Aqoxy7G00007 Aquilegia oxysepala HOM05D005424 ORTHO05D006726 1.4e-102 378.3 622 46.8
MSTRG.13701 Avicennia marina HOM05D005424 ORTHO05D006726 2.4e-99 367.5 555 47.7
PGR031G0320 Punica granatum HOM05D005424 ORTHO05D006726 4.1e-99 366.7 676 44.1
THA.LOC104813063 Tarenaya hassleriana HOM05D005424 ORTHO05D006726 1.6e-98 364.8 739 41.3
MBI12_g14812_MAGBIO Magnolia biondii HOM05D005424 ORTHO05D006726 5.9e-98 362.8 727 42.2
Hund11337 Selenicereus undatus HOM05D005424 ORTHO05D006726 3.8e-97 360.1 697 43.0
Migut.E00727 Erythranthe guttata HOM05D005424 ORTHO05D006726 1.6e-90 338.2 605 43.3
ECA233G6131 Erigeron canadensis HOM05D005424 ORTHO05D006726 7.8e-90 335.9 705 40.9
Oeu010728.1 Olea europaea HOM05D005424 ORTHO05D006726 5.0e-89 333.2 595 44.0
AUR62007075 Chenopodium quinoa HOM05D005424 ORTHO05D006726 8.6e-89 332.4 719 41.9
AUR62019939 Chenopodium quinoa HOM05D005424 ORTHO05D006726 4.7e-87 326.6 714 41.6
HanXRQChr07g0192271 Helianthus annuus HOM05D005424 ORTHO05D006726 5.2e-86 323.2 678 41.9
Sed0006250 Sechium edule HOM05D005424 ORTHO05D006726 5.7e-85 319.7 663 40.3
SGA_v2.0_scaffold88G27243 Striga asiatica HOM05D005424 ORTHO05D006726 7.8e-82 309.3 551 44.8
AL1G47110 Arabidopsis lyrata HOM05D005424 ORTHO05D006726 6.6e-81 306.2 625 41.1
Thhalv10006636m.g Eutrema salsugineum HOM05D005424 ORTHO05D006726 2.3e-78 297.7 678 39.2
CARHR032180 Cardamine hirsuta HOM05D005424 ORTHO05D006726 2.6e-77 294.3 609 41.1
Carub.0001s3113 Capsella rubella HOM05D005424 ORTHO05D006726 3.4e-77 293.9 651 39.8
Lsat_1_v5_gn_6_11441 Lactuca sativa HOM05D005424 ORTHO05D006726 2.9e-76 290.8 494 46.6
Aa31LG6G7470 Aethionema arabicum HOM05D005424 ORTHO05D006726 6.4e-76 289.7 460 46.1
Ah.07g198200 Amaranthus hybridus HOM05D005424 ORTHO05D006726 2.4e-75 287.7 674 37.4
Sp1g28160 Schrenkiella parvula HOM05D005424 ORTHO05D006726 9.2e-75 285.8 630 40.6
DCAR_009582 Daucus carota HOM05D005424 ORTHO05D006726 7.8e-74 282.7 679 39.3
AT1G32810 Arabidopsis thaliana HOM05D005424 ORTHO05D006726 2.5e-72 277.7 686 37.3
unitig_699.g19549 Utricularia gibba HOM05D005424 ORTHO05D006726 9.5e-64 249.2 633 37.6
BcaB04g17977 Brassica carinata HOM05D005424 ORTHO05D006726 6.2e-63 246.5 520 41.3
SEGI_18929 Sequoiadendron giganteum HOM05D005424 ORTHO05D006726 8.9e-62 242.7 642 36.6
TAR374G0493 Trochodendron aralioides HOM05D005424 ORTHO05D006726 3.8e-60 237.3 249 58.2
Aqoxy8s003 Aquilegia oxysepala HOM05D005424 ORTHO05D006726 3.2e-59 234.2 323 51.1
A08p09200 Brassica napus HOM05D005424 ORTHO05D006726 4.1e-59 233.8 432 43.1
BolC8t47971H Brassica oleracea HOM05D005424 ORTHO05D006726 2.1e-58 231.5 518 39.0
Ah.12g053330 Amaranthus hybridus HOM05D001091 ORTHO05D001020 4.3e-56 223.8 539 38.4
BcaC07g37610 Brassica carinata HOM05D005424 ORTHO05D006726 1.2e-55 222.2 573 36.1
PGSC0003DMG402012227 Solanum tuberosum HOM05D005424 ORTHO05D006726 2.4e-54 218.0 508 38.8
DCAR_019998 Daucus carota HOM05D005424 ORTHO05D006726 2.0e-53 214.9 317 47.6
BraA08t32921Z Brassica rapa HOM05D005424 ORTHO05D006726 3.4e-53 214.2 533 38.3
CDE11G1187 Ceratophyllum demersum HOM05D005424 ORTHO05D006726 7.6e-53 213.0 492 38.2
TPR.G34809 Trifolium pratense HOM05D005424 ORTHO05D006726 1.4e-51 208.8 528 38.1
HPP92_001577 Vanilla planifolia HOM05D005424 ORTHO05D006726 7.6e-45 186.4 499 35.1
SHI06919 Sapria himalayana HOM05D005424 ORTHO05D006726 8.4e-44 183.0 276 44.9
TPR.G34808 Trifolium pratense HOM05D005424 ORTHO05D006726 2.7e-42 177.9 156 66.0
Os04g0221600 Oryza sativa ssp. japonica HOM05D005424 ORTHO05D006726 1.6e-34 152.1 465 33.5
Oeu038526.1 Olea europaea HOM05D000700 ORTHO05D000397 8.7e-33 146.4 260 43.8
AagrBONN_evm.TU.Sc2ySwM_117.701 Anthoceros agrestis HOM05D005424 ORTHO05D006726 7.6e-29 133.3 647 29.4
ATR0078G022 Amborella trichopoda HOM05D005424 ORTHO05D006726 1.0e-25 122.9 581 31.3
Mapoly0057s0069 Marchantia polymorpha HOM05D005424 ORTHO05D006726 1.5e-24 119.0 571 29.6
SEGI_29779 Sequoiadendron giganteum HOM05D005424 ORTHO05D006726 1.9e-16 92.0 202 39.1
PGSC0003DMG401012227 Solanum tuberosum HOM05D005424 ORTHO05D006726 3.4e-13 81.3 93 52.7
TAR374G0151 Trochodendron aralioides HOM05D005424 ORTHO05D006726 9.4e-11 73.2 177 37.3
TPR.G31171 Trifolium pratense HOM05D005424 ORTHO05D006726 1.1e-08 66.2 44 72.7
Atru.chr5.3405 Acer truncatum HOM05D005424 ORTHO05D052405 2.4e-06 58.5 65 49.2


User provided reference genes

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