Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0145800 Salix brachista HOM05D007837 ORTHO05D009965 1.3e-126 456.4 234 100.0
Potri.011G153800 Populus trichocarpa HOM05D007837 ORTHO05D009965 1.2e-63 247.3 173 75.1
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 3.8e-30 136.0 150 54.0
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 2.3e-27 126.7 160 48.8
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 6.7e-27 125.2 151 48.3
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 1.3e-25 120.9 162 43.8
Dinv15942 Davidia involucrata HOM05D007837 ORTHO05D009965 9.1e-24 114.8 154 46.1
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 2.7e-23 113.2 157 43.3
QL05p065337 Quercus lobata HOM05D007837 ORTHO05D009965 4.5e-23 112.5 133 49.6
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 2.5e-21 106.7 155 43.2
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 2.7e-20 103.2 157 45.2
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 4.0e-19 99.4 121 47.9
TAR626G0822 Trochodendron aralioides HOM05D007837 ORTHO05D009965 1.2e-18 97.8 155 41.3
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 2.8e-17 93.2 150 38.7
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 2.8e-17 93.2 168 38.1
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 2.8e-17 93.2 174 36.8
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 6.3e-17 92.0 174 35.6
Lj1A1155T50 Lonicera japonica HOM05D007837 ORTHO05D009965 8.3e-17 91.7 151 42.4
CANSAT35G1648 Cannabis sativa HOM05D007837 ORTHO05D009965 1.4e-16 90.9 112 42.9
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 1.0e-14 84.7 155 36.8
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 1.7e-14 84.0 154 37.0
FAN25G3065 Fragaria x ananassa HOM05D007837 ORTHO05D009965 3.8e-14 82.8 96 47.9
TAR633G0058 Trochodendron aralioides HOM05D007837 ORTHO05D009965 3.8e-14 82.8 101 44.6
COL.COLO4_22875 Corchorus olitorius HOM05D007837 ORTHO05D009965 6.5e-14 82.0 152 37.5
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 6.5e-14 82.0 151 39.1
FAN21G3089 Fragaria x ananassa HOM05D007837 ORTHO05D009965 1.1e-13 81.3 96 46.9
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 1.1e-13 81.3 151 39.1
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 1.5e-13 80.9 151 39.1
Nitab4.5_0001219g0090 Nicotiana tabacum HOM05D007837 ORTHO05D009965 2.5e-13 80.1 114 39.5
Nitab4.5_0011721g0030 Nicotiana tabacum HOM05D007837 ORTHO05D009965 2.5e-13 80.1 114 40.4
FAN16G2143 Fragaria x ananassa HOM05D007837 ORTHO05D009965 4.2e-13 79.3 96 46.9
MD10G1240200 Malus domestica HOM05D007837 ORTHO05D009965 4.2e-13 79.3 158 39.2
FvH4_3g11620 Fragaria vesca HOM05D007837 ORTHO05D009965 9.5e-13 78.2 96 45.8
MD05G1261900 Malus domestica HOM05D007837 ORTHO05D009965 1.2e-12 77.8 157 39.5
Cc09_g07320 Coffea canephora HOM05D007837 ORTHO05D009965 2.1e-12 77.0 97 41.2
Sed0012016 Sechium edule HOM05D007837 ORTHO05D009965 2.1e-12 77.0 154 33.8
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 3.6e-12 76.3 150 36.7
RcHm_v2.0_Chr5g0018641 Rosa chinensis HOM05D007837 ORTHO05D009965 3.6e-12 76.3 135 35.6
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 4.0e-11 72.8 149 34.2
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 6.8e-11 72.0 49 69.4
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 9.8e-10 68.2 112 40.2
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 9.8e-10 68.2 146 35.6
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 9.8e-10 68.2 146 35.6
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 9.8e-10 68.2 114 36.0
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 3.7e-09 66.2 115 36.5
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 3.7e-09 66.2 115 35.7
Aqoxy3G03542 Aquilegia oxysepala HOM05D007837 ORTHO05D009965 4.9e-09 65.9 56 55.4
Hma1.2p1_0410F.1_g147000 Hydrangea macrophylla HOM05D007837 ORTHO05D009965 3.1e-08 63.2 86 43.0
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 1.2e-07 61.2 76 42.1
TAR362G0005 Trochodendron aralioides HOM05D007837 ORTHO05D009965 2.0e-07 60.5 58 50.0
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 4.5e-07 59.3 70 45.7
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 7.8e-07 58.5 90 36.7
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 1.3e-06 57.8 149 30.9
Medtr4g035250 Medicago truncatula HOM05D007837 ORTHO05D009965 1.7e-06 57.4 47 53.2


User provided reference genes

Program Settings