Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0138700 Salix brachista HOM05D004535 ORTHO05D005341 0.0e+00 3932.9 1978 100.0
Potri.001G470600 Populus trichocarpa HOM05D004535 ORTHO05D005341 0.0e+00 3218.3 1973 84.1
Manes.01G005500 Manihot esculenta HOM05D004535 ORTHO05D005341 0.0e+00 2949.5 1974 76.7
Atru.chr2.3782 Acer truncatum HOM05D004535 ORTHO05D005341 0.0e+00 2900.5 1974 74.9
GSVIVG01014769001 Vitis vinifera HOM05D004535 ORTHO05D005341 0.0e+00 2875.5 1973 74.6
Ciclev10007234m.g Citrus clementina HOM05D004535 ORTHO05D005341 0.0e+00 2837.0 1979 73.2
Prupe.6G032900 Prunus persica HOM05D004535 ORTHO05D005341 0.0e+00 2834.3 1973 72.5
Dinv19653 Davidia involucrata HOM05D004535 ORTHO05D005341 0.0e+00 2833.1 1977 73.1
CiPaw.11G209600 Carya illinoinensis HOM05D004535 ORTHO05D005341 0.0e+00 2815.8 1975 72.6
TWI38G2299 Tripterygium wilfordii HOM05D004535 ORTHO05D005341 0.0e+00 2806.5 1975 72.7
FAN16G2454 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2799.6 1976 71.9
FAN11G1653 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2796.1 1976 71.9
FAN25G2892 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2794.6 1976 71.9
RcHm_v2.0_Chr5g0075021 Rosa chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2794.2 1976 71.8
FAN21G2952 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2793.1 1976 71.8
MD11G1042000 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 2792.3 1973 71.6
Gorai.009G454100 Gossypium raimondii HOM05D004535 ORTHO05D005341 0.0e+00 2791.1 1961 72.8
Thecc.07G003100 Theobroma cacao HOM05D004535 ORTHO05D005341 0.0e+00 2785.7 1920 73.5
TAR627G0331 Trochodendron aralioides HOM05D004535 ORTHO05D005341 0.0e+00 2774.2 1973 71.6
CANSAT11G1644 Cannabis sativa HOM05D004535 ORTHO05D005341 0.0e+00 2773.0 1976 72.0
Hma1.2p1_0193F.1_g084240 Hydrangea macrophylla HOM05D004535 ORTHO05D005341 0.0e+00 2772.7 1973 71.4
MD03G1040600 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 2763.0 1973 71.1
CSS0018371 Camellia sinensis var. sinensis HOM05D004535 ORTHO05D005341 0.0e+00 2749.9 1973 71.4
QL08p000781 Quercus lobata HOM05D004535 ORTHO05D005341 0.0e+00 2738.4 1929 72.7
Haze_09903 Corylus avellana HOM05D004535 ORTHO05D005341 0.0e+00 2734.9 1981 71.6
Rhsim04G0008600 Rhododendron simsii HOM05D004535 ORTHO05D005341 0.0e+00 2729.9 1990 69.9
vmacro09603 Vaccinium macrocarpon HOM05D004535 ORTHO05D005341 0.0e+00 2727.6 2033 68.7
Gohir.D05G387450 Gossypium hirsutum HOM05D004535 ORTHO05D005341 0.0e+00 2725.3 1961 71.6
Lj1C898T24 Lonicera japonica HOM05D004535 ORTHO05D005341 0.0e+00 2712.2 1991 69.7
Duzib213G0320 Durio zibethinus HOM05D004535 ORTHO05D005341 0.0e+00 2709.9 1974 70.9
PGR083G0052 Punica granatum HOM05D004535 ORTHO05D005341 0.0e+00 2709.1 1973 69.5
FvH4_3g41830 Fragaria vesca HOM05D004535 ORTHO05D005341 0.0e+00 2704.1 1876 72.7
Eucgr.F02001 Eucalyptus grandis HOM05D004535 ORTHO05D005341 0.0e+00 2700.2 1973 69.4
Glyma.18G071500 Glycine max HOM05D004535 ORTHO05D005341 0.0e+00 2700.2 1976 69.3
Glyma.08G336400 Glycine max HOM05D004535 ORTHO05D005341 0.0e+00 2684.8 1977 69.0
Psat5g164120 Pisum sativum HOM05D004535 ORTHO05D005341 0.0e+00 2679.4 1977 69.0
Lj6g0015552 Lotus japonicus HOM05D004535 ORTHO05D005341 0.0e+00 2679.0 1976 68.2
Medtr3g461520 Medicago truncatula HOM05D004535 ORTHO05D005341 0.0e+00 2671.0 1976 68.6
Lalb_Chr18g0050431 Lupinus albus HOM05D004535 ORTHO05D005341 0.0e+00 2669.4 1975 68.4
Phvul.006G061700 Phaseolus vulgaris HOM05D004535 ORTHO05D005341 0.0e+00 2660.2 1976 68.3
Lalb_Chr20g0115261 Lupinus albus HOM05D004535 ORTHO05D005341 0.0e+00 2649.0 1976 68.2
Sed0018073 Sechium edule HOM05D004535 ORTHO05D005341 0.0e+00 2645.2 1973 68.5
TPR.G14720 Trifolium pratense HOM05D004535 ORTHO05D005341 0.0e+00 2626.3 1975 67.6
arahy.Tifrunner.gnm1.ann1.DDNH16 Arachis hypogaea HOM05D004535 ORTHO05D005341 0.0e+00 2622.0 2060 65.5
ClCG10G004180 Citrullus lanatus HOM05D004535 ORTHO05D005341 0.0e+00 2620.5 1985 67.8
MELO3C014086.2 Cucumis melo HOM05D004535 ORTHO05D005341 0.0e+00 2617.4 1974 68.0
Aqoxy4G02281 Aquilegia oxysepala HOM05D004535 ORTHO05D005341 0.0e+00 2615.5 1973 67.3
ECA240G2049 Erigeron canadensis HOM05D004535 ORTHO05D005341 0.0e+00 2605.9 1972 67.3
HanXRQChr03g0079281 Helianthus annuus HOM05D004535 ORTHO05D005341 0.0e+00 2602.0 1974 67.0
Thhalv10019881m.g Eutrema salsugineum HOM05D004535 ORTHO05D005341 0.0e+00 2599.7 1977 67.6
AL3G25150 Arabidopsis lyrata HOM05D004535 ORTHO05D005341 0.0e+00 2599.3 1976 67.4
Cc05_g15580 Coffea canephora HOM05D004535 ORTHO05D005341 0.0e+00 2598.2 1979 67.5
BcaB04g18753 Brassica carinata HOM05D004535 ORTHO05D005341 0.0e+00 2597.8 1975 67.4
Solyc07g066030.4 Solanum lycopersicum HOM05D004535 ORTHO05D005341 0.0e+00 2597.0 1974 67.3
Sopen07g034220 Solanum pennellii HOM05D004535 ORTHO05D005341 0.0e+00 2595.8 1974 67.2
Gohir.A04G001901 Gossypium hirsutum HOM05D004535 ORTHO05D005341 0.0e+00 2593.1 1832 73.0
THA.LOC104822705 Tarenaya hassleriana HOM05D004535 ORTHO05D005341 0.0e+00 2591.6 1975 67.2
AT3G13330 Arabidopsis thaliana HOM05D004535 ORTHO05D005341 0.0e+00 2588.5 1976 67.2
BolC3t16899H Brassica oleracea HOM05D004535 ORTHO05D005341 0.0e+00 2585.4 1975 67.2
Carub.0003s1271 Capsella rubella HOM05D004535 ORTHO05D005341 0.0e+00 2583.1 1976 67.0
BraA03t12967Z Brassica rapa HOM05D004535 ORTHO05D005341 0.0e+00 2581.6 1975 67.0
Aa31LG8G550 Aethionema arabicum HOM05D004535 ORTHO05D005341 0.0e+00 2580.8 1975 66.9
A03p38140 Brassica napus HOM05D004535 ORTHO05D005341 0.0e+00 2578.9 1975 67.0
VMungo0540G2510 Vigna mungo HOM05D004535 ORTHO05D005341 0.0e+00 2578.5 1921 68.6
C03p46300 Brassica napus HOM05D004535 ORTHO05D005341 0.0e+00 2575.4 1975 67.0
CsaV3_3G003990 Cucumis sativus L. HOM05D004535 ORTHO05D005341 0.0e+00 2572.0 1973 66.8
BcaC01g03999 Brassica carinata HOM05D004535 ORTHO05D005341 0.0e+00 2571.6 1975 66.9
Sp3g11530 Schrenkiella parvula HOM05D004535 ORTHO05D005341 0.0e+00 2566.6 1975 66.7
CARHR087940 Cardamine hirsuta HOM05D004535 ORTHO05D005341 0.0e+00 2562.7 1977 66.8
Migut.M01591 Erythranthe guttata HOM05D004535 ORTHO05D005341 0.0e+00 2556.6 1972 66.1
PSO210G5731 Papaver somniferum HOM05D004535 ORTHO05D005341 0.0e+00 2555.4 1972 66.4
Sc20g0000040 Simmondsia chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2550.0 1974 66.1
AUR62035634 Chenopodium quinoa HOM05D004535 ORTHO05D005341 0.0e+00 2538.8 1974 65.8
AUR62017172 Chenopodium quinoa HOM05D004535 ORTHO05D005341 0.0e+00 2538.5 1974 65.6
EL10Ac4g07499 Beta vulgaris HOM05D004535 ORTHO05D005341 0.0e+00 2529.6 1970 65.2
MSTRG.15824 Avicennia marina HOM05D004535 ORTHO05D005341 0.0e+00 2517.7 1972 65.0
Lsat_1_v5_gn_9_89621 Lactuca sativa HOM05D004535 ORTHO05D005341 0.0e+00 2513.0 1966 65.8
Nitab4.5_0001303g0050 Nicotiana tabacum HOM05D004535 ORTHO05D005341 0.0e+00 2503.0 1959 65.8
Oeu013013.2 Olea europaea HOM05D004535 ORTHO05D005341 0.0e+00 2492.6 2048 63.4
SalBow8G3417 Salvia bowleyana HOM05D004535 ORTHO05D005341 0.0e+00 2492.6 2001 64.3
HanXRQChr13g0409231 Helianthus annuus HOM05D004535 ORTHO05D005341 0.0e+00 2486.8 1972 64.6
MBI15_g37116_MAGBIO Magnolia biondii HOM05D004535 ORTHO05D005341 0.0e+00 2473.7 1947 65.9
QL08p000755 Quercus lobata HOM05D004535 ORTHO05D005341 0.0e+00 2468.3 2101 62.0
Medtr3g461500 Medicago truncatula HOM05D004535 ORTHO05D005341 0.0e+00 2460.6 2012 63.6
Peaxi162Scf00232g00530 Petunia axillaris HOM05D004535 ORTHO05D005341 0.0e+00 2454.9 1974 64.8
Haze_09904 Corylus avellana HOM05D004535 ORTHO05D005341 0.0e+00 2443.7 2056 62.5
Hund22978 Selenicereus undatus HOM05D004535 ORTHO05D005341 0.0e+00 2440.6 1976 64.0
SalBow8G2487 Salvia bowleyana HOM05D004535 ORTHO05D005341 0.0e+00 2435.2 1973 63.5
DCAR_013765 Daucus carota HOM05D004535 ORTHO05D005341 0.0e+00 2414.4 1973 64.2
Nn1g08312 Nelumbo nucifera HOM05D004535 ORTHO05D005341 0.0e+00 2405.2 1785 69.6
Ah.06g180940 Amaranthus hybridus HOM05D004535 ORTHO05D005341 0.0e+00 2385.1 1977 61.9
Actinidia03667 Actinidia chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2344.7 1721 71.4
Nitab4.5_0000152g0130 Nicotiana tabacum HOM05D004535 ORTHO05D005341 0.0e+00 2272.7 1805 65.5
ATR0751G071 Amborella trichopoda HOM05D004535 ORTHO05D005341 0.0e+00 2270.4 1979 59.7
HPP92_018915 Vanilla planifolia HOM05D004535 ORTHO05D005341 0.0e+00 2268.8 1985 58.9
Ca_14867_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 0.0e+00 2249.2 1588 71.0
Cpa.g.sc12.80 Carica papaya HOM05D004535 ORTHO05D005341 0.0e+00 2233.8 1843 64.6
CiPaw.12G142100 Carya illinoinensis HOM05D004535 ORTHO05D005341 0.0e+00 2224.1 1772 64.5
arahy.Tifrunner.gnm1.ann1.HJC4WF Arachis hypogaea HOM05D004535 ORTHO05D005341 0.0e+00 2185.2 1497 72.7
Potri.011G167700 Populus trichocarpa HOM05D004535 ORTHO05D005341 0.0e+00 2177.5 1197 91.9
Zm00001eb281130 Zea mays HOM05D004535 ORTHO05D005341 0.0e+00 2076.2 1976 55.3
MD00G1206400 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 1877.1 1318 72.0
CDE05G3236 Ceratophyllum demersum HOM05D004535 ORTHO05D005341 0.0e+00 1770.7 1603 58.3
unitig_699.g19598 Utricularia gibba HOM05D004535 ORTHO05D005341 0.0e+00 1666.7 1972 47.8
PGSC0003DMG401022150 Solanum tuberosum HOM05D004535 ORTHO05D005341 0.0e+00 1422.1 995 70.6
Pp3c20_11540 Physcomitrium patens HOM05D004535 ORTHO05D005341 0.0e+00 1342.0 2014 39.2
Mapoly0071s0029 Marchantia polymorpha HOM05D004535 ORTHO05D005341 0.0e+00 1321.6 2087 38.3
AagrBONN_evm.TU.Sc2ySwM_228.5886 Anthoceros agrestis HOM05D004535 ORTHO05D005341 0.0e+00 1310.0 2017 38.8
Mapoly0069s0005 Marchantia polymorpha HOM05D004535 ORTHO05D005341 0.0e+00 1268.8 2033 36.8
CAN.G623.63 Capsicum annuum HOM05D004535 ORTHO05D005341 0.0e+00 1161.4 972 63.9
Pp3c15_5520 Physcomitrium patens HOM05D004535 ORTHO05D005341 0.0e+00 1144.8 1994 35.7
SMO184G0002 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 0.0e+00 1112.4 2027 35.2
SMO340G0109 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 0.0e+00 1080.9 2004 34.4
CAN.G623.64 Capsicum annuum HOM05D004535 ORTHO05D005341 4.9e-304 1048.9 998 58.1
Ca_14861_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 6.0e-302 1042.0 772 68.0
SMO239G0001 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 3.0e-293 1013.1 1980 32.7
COL.COLO4_07778 Corchorus olitorius HOM05D004535 ORTHO05D005341 3.7e-267 926.4 1219 47.3
Potri.011G167650 Populus trichocarpa HOM05D004535 ORTHO05D005341 5.7e-260 902.5 609 78.8
CBR_g24134 Chara braunii HOM05D004535 ORTHO05D005341 7.5e-252 875.5 2117 30.3
Os06g0301300 Oryza sativa ssp. japonica HOM05D004535 ORTHO05D005341 2.2e-243 847.4 740 57.4
Actinidia00829 Actinidia chinensis HOM05D004535 ORTHO05D005341 7.6e-164 583.2 727 50.5
QL10p044954 Quercus lobata HOM05D004535 ORTHO05D005341 4.2e-146 524.2 649 49.3
SEGI_13123 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 4.2e-138 497.7 458 53.7
Ca_14860_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 1.4e-117 429.5 444 53.8
VMungo0540G1109 Vigna mungo HOM05D004535 ORTHO05D005341 2.7e-116 425.2 316 68.0
SEGI_38328 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 3.8e-115 421.4 469 47.5
VMungo1127G2045 Vigna mungo HOM05D004535 ORTHO05D005341 1.2e-105 389.8 274 70.8
MCO11G531 Micromonas commoda HOM05D004535 ORTHO05D005341 1.6e-105 389.4 2008 23.8
Actinidia00827 Actinidia chinensis HOM05D004535 ORTHO05D005341 1.4e-104 386.3 301 63.8
MD00G1206600 Malus domestica HOM05D004535 ORTHO05D005341 2.2e-102 379.0 220 75.9
MD00G1206500 Malus domestica HOM05D004535 ORTHO05D005341 3.2e-93 348.6 298 65.8
arahy.Tifrunner.gnm1.ann1.P6R29M Arachis hypogaea HOM05D004535 ORTHO05D005341 1.5e-79 303.1 348 53.2
Actinidia03668 Actinidia chinensis HOM05D004535 ORTHO05D005341 4.6e-76 291.6 225 61.3
Nn1g08306 Nelumbo nucifera HOM05D004535 ORTHO05D005341 9.6e-74 283.9 166 76.5
SEGI_32129 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 2.1e-73 282.7 342 50.9
PRCOL_00006556 Prasinoderma coloniale HOM05D004535 ORTHO05D005341 9.3e-69 267.3 2061 21.7
SEGI_15666 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 2.3e-35 156.4 176 52.3
Cpa.g.sc12.82 Carica papaya HOM05D004535 ORTHO05D005341 1.1e-34 154.1 141 61.7
Actinidia00828 Actinidia chinensis HOM05D004535 ORTHO05D005341 4.8e-33 148.7 210 44.3
arahy.Tifrunner.gnm1.ann1.A7P7U5 Arachis hypogaea HOM05D004535 ORTHO05D005341 9.4e-29 134.4 93 78.5
arahy.Tifrunner.gnm1.ann1.6S2B7N Arachis hypogaea HOM05D012221 ORTHO05D005341 8.0e-28 131.3 172 51.2
arahy.Tifrunner.gnm1.ann1.QBA8JR Arachis hypogaea HOM05D004535 ORTHO05D005341 1.0e-27 131.0 163 52.8
arahy.Tifrunner.gnm1.ann1.EHT35G Arachis hypogaea HOM05D004535 ORTHO05D005341 1.3e-25 124.0 115 62.6
Ca_31034_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 1.2e-23 117.5 74 74.3
PSO541G1144 Papaver somniferum HOM05D004535 ORTHO05D005341 1.3e-22 114.0 74 67.6
Lsat_1_v5_gn_0_5420 Lactuca sativa HOM05D004535 ORTHO05D005341 5.0e-22 112.1 74 68.9
Psat5g106440 Pisum sativum HOM05D004535 ORTHO05D005341 2.5e-21 109.8 65 83.1
VMungo1215G1327 Vigna mungo HOM05D004535 ORTHO05D005341 5.2e-19 102.1 76 68.4
Cre14.g628702 Chlamydomonas reinhardtii HOM05D004535 ORTHO05D005341 8.8e-19 101.3 665 23.0
arahy.Tifrunner.gnm1.ann1.HQ6FCP Arachis hypogaea HOM05D004535 ORTHO05D005341 1.8e-16 93.6 170 42.4
Cfa027001 Carpinus fangiana HOM05D004535 ORTHO05D005341 1.6e-15 90.5 1090 19.6
SEGI_18126 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 2.7e-12 79.7 72 47.2
Psat4g112520 Pisum sativum HOM05D004535 ORTHO05D005341 8.8e-11 74.7 45 75.6
VMungo0110G0001 Vigna mungo HOM05D004535 ORTHO05D005341 1.5e-10 73.9 63 54.0
PGSC0003DMG402022150 Solanum tuberosum HOM05D004535 ORTHO05D005341 2.0e-10 73.6 96 41.7
CSS0045016 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 1.0e-06 61.2 146 33.6


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