Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 1.2e-74 283.1 148 100.0
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 6.5e-68 260.8 149 93.3
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 4.1e-54 214.9 149 79.2
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 2.2e-39 166.0 143 64.3
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 2.0e-37 159.5 146 61.0
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 7.8e-37 157.5 144 60.4
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 2.9e-36 155.6 142 59.2
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 2.9e-36 155.6 142 59.2
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 1.9e-35 152.9 142 58.5
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 5.6e-35 151.4 144 59.7
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 5.6e-35 151.4 144 58.3
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 2.6e-32 142.5 145 60.0
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 3.4e-32 142.1 143 54.5
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 1.3e-31 140.2 144 54.9
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.3e-31 140.2 148 52.7
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 1.3e-31 140.2 145 55.9
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 3.7e-31 138.7 144 54.9
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 1.4e-30 136.7 142 53.5
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 1.4e-30 136.7 142 52.8
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 2.4e-30 136.0 146 52.7
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 3.2e-30 135.6 141 53.9
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 3.2e-30 135.6 143 55.2
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 4.1e-30 135.2 144 55.6
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 7.0e-30 134.4 146 52.7
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 7.0e-30 134.4 146 52.7
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 4.6e-29 131.7 143 53.1
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 7.8e-29 131.0 144 52.8
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 7.8e-29 131.0 146 50.0
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 3.0e-28 129.0 146 54.1
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 1.5e-27 126.7 143 49.7
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 1.5e-27 126.7 143 53.8
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 1.9e-27 126.3 142 50.0
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 2.5e-27 125.9 144 50.0
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 3.3e-27 125.6 145 52.4
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 4.3e-27 125.2 142 50.7
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 7.3e-27 124.4 144 50.7
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.2e-26 123.6 142 50.0
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 1.6e-26 123.2 143 52.4
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 2.1e-26 122.9 146 52.1
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 3.6e-26 122.1 146 52.1
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 4.7e-26 121.7 127 55.1
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 6.2e-26 121.3 138 52.9
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 1.1e-25 120.6 145 51.7
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 1.4e-25 120.2 143 48.3
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 1.8e-25 119.8 95 65.3
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 1.8e-25 119.8 141 53.2
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 2.3e-25 119.4 133 54.9
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 3.1e-25 119.0 147 49.0
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 3.1e-25 119.0 141 48.9
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 8.9e-25 117.5 133 47.4
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 1.5e-24 116.7 143 52.4
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 2.0e-24 116.3 143 46.9
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 3.4e-24 115.5 142 52.8
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 4.4e-24 115.2 144 48.6
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 5.8e-24 114.8 138 48.6
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 9.8e-24 114.0 144 46.5
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 1.3e-23 113.6 143 53.8
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 4.9e-23 111.7 133 45.9
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 6.4e-23 111.3 133 45.9
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 1.1e-22 110.5 143 46.9
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 1.9e-22 109.8 145 46.9
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 3.2e-22 109.0 144 44.4
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 4.1e-22 108.6 150 50.0
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 5.4e-22 108.2 139 46.0
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 5.4e-22 108.2 86 68.6
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 5.4e-22 108.2 133 45.9
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 2.1e-21 106.3 143 49.7
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 3.5e-21 105.5 131 49.6
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 1.3e-20 103.6 150 48.0
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 3.9e-20 102.1 141 44.7
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 3.9e-20 102.1 146 44.5
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 5.1e-20 101.7 140 44.3
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 6.6e-20 101.3 144 42.4
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 1.1e-19 100.5 145 48.3
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 4.3e-19 98.6 95 55.8
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 7.3e-19 97.8 145 42.8
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 7.3e-19 97.8 143 42.7
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 7.3e-19 97.8 140 45.7
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 9.5e-19 97.4 140 45.7
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 1.2e-18 97.1 143 42.0
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 6.2e-18 94.7 128 50.0
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 1.4e-17 93.6 130 44.6
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 2.0e-16 89.7 149 41.6
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 2.0e-16 89.7 69 60.9
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 2.6e-16 89.4 144 40.3
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 7.5e-16 87.8 125 43.2
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 2.9e-15 85.9 142 42.3
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 3.7e-15 85.5 142 41.5
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 3.7e-15 85.5 106 47.2
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 4.9e-15 85.1 100 51.0
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 8.3e-15 84.3 138 41.3
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 8.3e-15 84.3 98 50.0
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 7.1e-14 81.3 150 42.0
SHI11157 Sapria himalayana HOM05D006398 ORTHO05D007983 2.1e-13 79.7 134 41.8
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 1.3e-12 77.0 133 36.1
Cpa.g.sc178.36 Carica papaya HOM05D006398 ORTHO05D007983 1.7e-12 76.6 104 45.2
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 3.0e-12 75.9 141 40.4
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 3.6e-10 68.9 146 35.6
THA.LOC109117268 Tarenaya hassleriana HOM05D006398 ORTHO05D007983 8.1e-10 67.8 143 39.9
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 1.2e-08 63.9 139 37.4
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 1.5e-08 63.5 143 36.4
Lalb_Chr05g0215011 Lupinus albus HOM05D006398 ORTHO05D007983 2.0e-08 63.2 142 34.5
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 2.9e-07 59.3 139 33.8
SEGI_02084 Sequoiadendron giganteum HOM05D006398 ORTHO05D007983 4.9e-07 58.5 136 31.6
CARHR161080 Cardamine hirsuta HOM05D006398 ORTHO05D007983 2.4e-06 56.2 139 34.5


User provided reference genes

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